RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 IGHV3-38A0A0C4DH36 116 aa14.35□□□□□ -0.11
NECAB3-213ENST00000488489 ZNF815PA8K554 130 aa14.35□□□□□ -0.11
NECAB3-213ENST00000488489 H3BMG7 143 aa14.34□□□□□ -0.11
NECAB3-213ENST00000488489 K7EQD1 137 aa14.34□□□□□ -0.11
NECAB3-213ENST00000488489 DEFB130BP0DP73 79 aa14.34□□□□□ -0.11
NECAB3-213ENST00000488489 DEFB130AP0DP74 79 aa14.34□□□□□ -0.11
NECAB3-213ENST00000488489 WFDC2Q14508 124 aa14.34□□□□□ -0.11
NECAB3-213ENST00000488489 C20orf203Q8NBC4 194 aa14.34□□□□□ -0.11
NECAB3-213ENST00000488489 ZNRF2Q8NHG8 242 aa14.34□□□□□ -0.11
NECAB3-213ENST00000488489 DEFB4AO15263 64 aa14.33□□□□□ -0.11
NECAB3-213ENST00000488489 PAPPA-AS1Q5QFB9 102 aa14.33□□□□□ -0.11
NECAB3-213ENST00000488489 LINC00612Q8N6U2 182 aa14.33□□□□□ -0.11
NECAB3-213ENST00000488489 IGLV4-69A0A075B6H9 119 aa14.33□□□□□ -0.12
NECAB3-213ENST00000488489 TMEM238LA0A1B0GVL6 79 aa14.32□□□□□ -0.12
NECAB3-213ENST00000488489 A6NJY4 79 aa14.32□□□□□ -0.12
NECAB3-213ENST00000488489 TRBV10-1A0A0K0K1A3 114 aa14.32□□□□□ -0.12
NECAB3-213ENST00000488489 FHL2Q14192 279 aa14.32□□□□□ -0.12
NECAB3-213ENST00000488489 PLEKHB2Q96CS7 222 aa14.32□□□□□ -0.12
NECAB3-213ENST00000488489 IGHV4-28A0A0C4DH34 117 aa14.31□□□□□ -0.12
NECAB3-213ENST00000488489 C11orf86A6NJI1 115 aa14.31□□□□□ -0.12
NECAB3-213ENST00000488489 SCGB1D4Q6XE38 83 aa14.31□□□□□ -0.12
NECAB3-213ENST00000488489 RNF183Q96D59 192 aa14.31□□□□□ -0.12
NECAB3-213ENST00000488489 PRO0461Q9UI25 63 aa14.31□□□□□ -0.12
NECAB3-213ENST00000488489 TMEM238C9JI98 176 aa14.3□□□□□ -0.12
NECAB3-213ENST00000488489 HERVK_113P61574 105 aa14.3□□□□□ -0.12
NECAB3-213ENST00000488489 PMVKQ15126 192 aa14.3□□□□□ -0.12
NECAB3-213ENST00000488489 GAGE13Q4V321 117 aa14.3□□□□□ -0.12
NECAB3-213ENST00000488489 TMEM141Q96I45 108 aa14.3□□□□□ -0.12
NECAB3-213ENST00000488489 TIMM17AQ99595 171 aa14.3□□□□□ -0.12
NECAB3-213ENST00000488489 FAM222AQ5U5X8 452 aa14.3□□□□□ -0.12
NECAB3-213ENST00000488489 OPRPNQ99935 248 aaPredicted RBP14.3□□□□□ -0.12
NECAB3-213ENST00000488489 CHCHD7Q9BUK0 85 aa14.3□□□□□ -0.12
NECAB3-213ENST00000488489 TRGV4A0A0C4DH28 118 aa14.29□□□□□ -0.12
NECAB3-213ENST00000488489 LOC100131303A0A0U1RQF7 123 aa14.29□□□□□ -0.12
NECAB3-213ENST00000488489 J3QR89 54 aa14.29□□□□□ -0.12
NECAB3-213ENST00000488489 CIDEAO60543 219 aa14.29□□□□□ -0.12
NECAB3-213ENST00000488489 UBE2D1P51668 147 aa14.29□□□□□ -0.12
NECAB3-213ENST00000488489 Q8NAQ8 132 aa14.29□□□□□ -0.12
NECAB3-213ENST00000488489 TRBV6-4A0A1B0GX49 114 aa14.29□□□□□ -0.12
NECAB3-213ENST00000488489 RPL36AP83881 106 aaKnown RBP14.29□□□□□ -0.12
NECAB3-213ENST00000488489 RPL36ALQ969Q0 106 aaKnown RBP14.29□□□□□ -0.12
NECAB3-213ENST00000488489 PGPEP1Q9NXJ5 209 aa14.29□□□□□ -0.12
NECAB3-213ENST00000488489 GAGE12JA6NER3 117 aa14.28□□□□□ -0.12
NECAB3-213ENST00000488489 GAGE4Q13068 117 aa14.28□□□□□ -0.12
NECAB3-213ENST00000488489 GAGE5Q13069 117 aa14.28□□□□□ -0.12
NECAB3-213ENST00000488489 MGAM2Q2M2H8 2515 aa14.28□□□□□ -0.12
NECAB3-213ENST00000488489 UBE2D3P61077 147 aa14.27□□□□□ -0.12
NECAB3-213ENST00000488489 UBE2D2P62837 147 aa14.27□□□□□ -0.12
NECAB3-213ENST00000488489 A8MZ25 164 aa14.27□□□□□ -0.13
NECAB3-213ENST00000488489 SRSF9Q13242 221 aaKnown RBP eCLIP14.27□□□□□ -0.137e-7■■■■□ 19.4
NECAB3-213ENST00000488489 ETDBQ3ZM63 59 aa14.27□□□□□ -0.13
NECAB3-213ENST00000488489 MIFP14174 115 aa14.26□□□□□ -0.13
NECAB3-213ENST00000488489 SH2D6Q7Z4S9 175 aa14.26□□□□□ -0.13
NECAB3-213ENST00000488489 FAM104AQ969W3 186 aa14.26□□□□□ -0.13
NECAB3-213ENST00000488489 MDFIQ99750 246 aa14.26□□□□□ -0.13
NECAB3-213ENST00000488489 LYRM9A8MSI8 78 aa14.26□□□□□ -0.13
NECAB3-213ENST00000488489 A0A0J9YY99 117 aa14.25□□□□□ -0.13
NECAB3-213ENST00000488489 CEMP1Q6PRD7 247 aaPredicted RBP14.25□□□□□ -0.13
NECAB3-213ENST00000488489 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.24□□□□□ -0.13
NECAB3-213ENST00000488489 IGKV2-29A2NJV5 120 aaPredicted RBP14.24□□□□□ -0.13
NECAB3-213ENST00000488489 NTM-AS1Q6ZSK4 140 aa14.24□□□□□ -0.13
NECAB3-213ENST00000488489 DAZ4Q86SG3 579 aaKnown RBP14.24□□□□□ -0.13
NECAB3-213ENST00000488489 MTURNQ8N3F0 131 aa14.24□□□□□ -0.13
NECAB3-213ENST00000488489 DAZ3Q9NR90 486 aaKnown RBP14.24□□□□□ -0.13
NECAB3-213ENST00000488489 CELA1Q9UNI1 258 aa14.24□□□□□ -0.13
NECAB3-213ENST00000488489 TSPAN13O95857 204 aa14.23□□□□□ -0.13
NECAB3-213ENST00000488489 IGLV4-3A0A075B6K6 122 aa14.23□□□□□ -0.13
NECAB3-213ENST00000488489 GAGE12HA6NDE8 117 aa14.23□□□□□ -0.13
NECAB3-213ENST00000488489 SIGMAR1Q99720 223 aa14.23□□□□□ -0.13
NECAB3-213ENST00000488489 SPATA25Q9BR10 227 aa14.23□□□□□ -0.13
NECAB3-213ENST00000488489 PYGO1Q9Y3Y4 419 aa14.23□□□□□ -0.13
NECAB3-213ENST00000488489 TENM3Q9P273 2699 aa14.22□□□□□ -0.13
NECAB3-213ENST00000488489 SCGB1A1P11684 91 aa14.22□□□□□ -0.13
NECAB3-213ENST00000488489 TSPEAR-AS2P59090 65 aa14.22□□□□□ -0.13
NECAB3-213ENST00000488489 RETNQ9HD89 108 aa14.21□□□□□ -0.13
NECAB3-213ENST00000488489 UBE2D4Q9Y2X8 147 aa14.21□□□□□ -0.13
NECAB3-213ENST00000488489 TMEM170BQ5T4T1 132 aa14.21□□□□□ -0.13
NECAB3-213ENST00000488489 NFE4Q86UQ8 179 aa14.2□□□□□ -0.14
NECAB3-213ENST00000488489 GTSF1LQ9H1H1 148 aa14.2□□□□□ -0.14
NECAB3-213ENST00000488489 IGHV3-30P01768 117 aa14.19□□□□□ -0.14
NECAB3-213ENST00000488489 LINC00694P0DN24 101 aa14.19□□□□□ -0.14
NECAB3-213ENST00000488489 IGHV3-30-5P0DP03 117 aa14.19□□□□□ -0.14
NECAB3-213ENST00000488489 CRYBA4P53673 196 aa14.19□□□□□ -0.14
NECAB3-213ENST00000488489 LYRM7Q5U5X0 104 aa14.19□□□□□ -0.14
NECAB3-213ENST00000488489 ATP6V0E2Q8NHE4 81 aa14.19□□□□□ -0.14
NECAB3-213ENST00000488489 AMELXQ99217 191 aa14.19□□□□□ -0.14
NECAB3-213ENST00000488489 APOMO95445 188 aa14.18□□□□□ -0.14
NECAB3-213ENST00000488489 PRB2P02812 416 aaPredicted RBP14.18□□□□□ -0.14
NECAB3-213ENST00000488489 DAD1P61803 113 aa14.18□□□□□ -0.14
NECAB3-213ENST00000488489 RNASE13Q5GAN3 156 aaKnown RBP14.18□□□□□ -0.14
NECAB3-213ENST00000488489 LOC107984156A0A0G2JMH3 177 aa14.17□□□□□ -0.14
NECAB3-213ENST00000488489 J3QQQ9 107 aa14.17□□□□□ -0.14
NECAB3-213ENST00000488489 SMCPP49901 116 aaPredicted RBP14.17□□□□□ -0.14
NECAB3-213ENST00000488489 ARL17AQ8IVW1 177 aa14.17□□□□□ -0.14
NECAB3-213ENST00000488489 VCX2Q9H322 139 aa14.17□□□□□ -0.14
NECAB3-213ENST00000488489 SPANXA1Q9NS26 97 aa14.17□□□□□ -0.14
NECAB3-213ENST00000488489 PRO0255Q9UI72 69 aa14.17□□□□□ -0.14
NECAB3-213ENST00000488489 SPART-AS1P0CW21 52 aa14.16□□□□□ -0.14
NECAB3-213ENST00000488489 LGALS3P17931 250 aaKnown RBP14.16□□□□□ -0.14
NECAB3-213ENST00000488489 SBSPONQ8IVN8 264 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms