RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 FAM30AQ9NZY2 134 aa11.12□□□□□ -0.63
HMG20B-212ENST00000487894 VPS13BQ7Z7G8 4022 aa11.12□□□□□ -0.63
HMG20B-212ENST00000487894 FAT1Q14517 4588 aa11.11□□□□□ -0.63
HMG20B-212ENST00000487894 IGKV3OR2-268A0A0C4DH90 116 aa11.11□□□□□ -0.63
HMG20B-212ENST00000487894 TNFRSF6BO95407 300 aa11.11□□□□□ -0.63
HMG20B-212ENST00000487894 HAMPP81172 84 aa11.11□□□□□ -0.63
HMG20B-212ENST00000487894 MRPL52Q86TS9 123 aaKnown RBP11.11□□□□□ -0.63
HMG20B-212ENST00000487894 COMMD7Q86VX2 200 aa11.11□□□□□ -0.63
HMG20B-212ENST00000487894 C20orf78Q9BR46 151 aa11.11□□□□□ -0.63
HMG20B-212ENST00000487894 NPYP01303 97 aa11.1□□□□□ -0.63
HMG20B-212ENST00000487894 PRSS1P07477 247 aa11.1□□□□□ -0.63
HMG20B-212ENST00000487894 FCER1GP30273 86 aa11.1□□□□□ -0.63
HMG20B-212ENST00000487894 RPL32P62910 135 aaKnown RBP11.1□□□□□ -0.63
HMG20B-212ENST00000487894 Q6ZSA8 131 aa11.1□□□□□ -0.63
HMG20B-212ENST00000487894 BTF3L4Q96K17 158 aa11.1□□□□□ -0.63
HMG20B-212ENST00000487894 KIR2DL4Q99706 377 aa11.1□□□□□ -0.63
HMG20B-212ENST00000487894 OR5A1Q8NGJ0 315 aa11.09□□□□□ -0.63
HMG20B-212ENST00000487894 TMEM101Q96IK0 257 aa11.09□□□□□ -0.63
HMG20B-212ENST00000487894 SMIM2Q9BVW6 85 aa11.09□□□□□ -0.63
HMG20B-212ENST00000487894 PHOX2AO14813 284 aa11.08□□□□□ -0.64
HMG20B-212ENST00000487894 PPBPP02775 128 aa11.08□□□□□ -0.64
HMG20B-212ENST00000487894 ODF1Q14990 250 aa11.08□□□□□ -0.64
HMG20B-212ENST00000487894 CLRN3Q8NCR9 226 aa11.08□□□□□ -0.64
HMG20B-212ENST00000487894 SEC11CQ9BY50 192 aa11.08□□□□□ -0.64
HMG20B-212ENST00000487894 GAGE12HA6NDE8 117 aa11.07□□□□□ -0.64
HMG20B-212ENST00000487894 ORMDL3Q8N138 153 aa11.07□□□□□ -0.64
HMG20B-212ENST00000487894 CHCHD10Q8WYQ3 142 aaPredicted RBP11.07□□□□□ -0.64
HMG20B-212ENST00000487894 CDC42SE2Q9NRR3 84 aa11.07□□□□□ -0.64
HMG20B-212ENST00000487894 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
HMG20B-212ENST00000487894 TMEM136Q6ZRR5 245 aa11.05□□□□□ -0.64
HMG20B-212ENST00000487894 ZNF664Q8N3J9 261 aa11.05□□□□□ -0.64
HMG20B-212ENST00000487894 C15orf56Q8N910 161 aa11.05□□□□□ -0.64
HMG20B-212ENST00000487894 PRELID3AQ96N28 172 aa11.05□□□□□ -0.64
HMG20B-212ENST00000487894 IMMP2LQ96T52 175 aa11.05□□□□□ -0.64
HMG20B-212ENST00000487894 CTDSP1Q9GZU7 261 aa11.05□□□□□ -0.64
HMG20B-212ENST00000487894 LINC00959A0A1B0GUT2 108 aa11.04□□□□□ -0.64
HMG20B-212ENST00000487894 TCAPO15273 167 aa11.04□□□□□ -0.64
HMG20B-212ENST00000487894 SMR3BP02814 79 aaPredicted RBP11.04□□□□□ -0.64
HMG20B-212ENST00000487894 DGAT2L7PQ6IED9 249 aa11.04□□□□□ -0.64
HMG20B-212ENST00000487894 CSDC2Q9Y534 153 aaKnown RBP11.04□□□□□ -0.64
HMG20B-212ENST00000487894 hDV102S1A0JD36 115 aa11.03□□□□□ -0.64
HMG20B-212ENST00000487894 FOXI1Q12951 378 aa11.03□□□□□ -0.64
HMG20B-212ENST00000487894 C10orf91Q5T1B1 145 aa11.03□□□□□ -0.64
HMG20B-212ENST00000487894 EPM2AB3EWF7 344 aa11.02□□□□□ -0.65
HMG20B-212ENST00000487894 CCL25O15444 150 aa11.02□□□□□ -0.65
HMG20B-212ENST00000487894 CNBPP62633 177 aaKnown RBP11.02□□□□□ -0.65
HMG20B-212ENST00000487894 RPL39P62891 51 aaKnown RBP11.02□□□□□ -0.65
HMG20B-212ENST00000487894 SMAGPQ0VAQ4 97 aa11.02□□□□□ -0.65
HMG20B-212ENST00000487894 Q5VSD8 79 aa11.02□□□□□ -0.65
HMG20B-212ENST00000487894 Q6ZUT4 128 aa11.02□□□□□ -0.65
HMG20B-212ENST00000487894 C9orf163Q8N9P6 203 aa11.02□□□□□ -0.65
HMG20B-212ENST00000487894 TMEM18Q96B42 140 aa11.02□□□□□ -0.65
HMG20B-212ENST00000487894 TIMM21Q9BVV7 248 aa11.02□□□□□ -0.65
HMG20B-212ENST00000487894 LAMTOR2Q9Y2Q5 125 aa11.02□□□□□ -0.65
HMG20B-212ENST00000487894 XCL1P47992 114 aa11.01□□□□□ -0.65
HMG20B-212ENST00000487894 RNASE13Q5GAN3 156 aaKnown RBP11.01□□□□□ -0.65
HMG20B-212ENST00000487894 CARHSP1Q9Y2V2 147 aaKnown RBP11.01□□□□□ -0.65
HMG20B-212ENST00000487894 TRAV9-1A0A075B6T8 112 aa11□□□□□ -0.65
HMG20B-212ENST00000487894 PRSS47A8MTI9 375 aa11□□□□□ -0.65
HMG20B-212ENST00000487894 SLPIP03973 132 aa11□□□□□ -0.65
HMG20B-212ENST00000487894 SS18Q15532 418 aa11□□□□□ -0.65
HMG20B-212ENST00000487894 SCXQ7RTU7 201 aa11□□□□□ -0.65
HMG20B-212ENST00000487894 SRRM2Q9UQ35 2752 aaKnown RBP11□□□□□ -0.65
HMG20B-212ENST00000487894 CFAP161Q6P656 301 aa10.99□□□□□ -0.65
HMG20B-212ENST00000487894 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
HMG20B-212ENST00000487894 MAP1LC3AQ9H492 121 aa10.99□□□□□ -0.65
HMG20B-212ENST00000487894 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
HMG20B-212ENST00000487894 CHAC1Q9BUX1 264 aa10.98□□□□□ -0.65
HMG20B-212ENST00000487894 AP5S1Q9NUS5 200 aa10.98□□□□□ -0.65
HMG20B-212ENST00000487894 GVQW2A0A096LPI5 108 aaPredicted RBP10.97□□□□□ -0.65
HMG20B-212ENST00000487894 LOC389332A0A1B0GUA5 103 aa10.97□□□□□ -0.65
HMG20B-212ENST00000487894 CD164L2Q6UWJ8 174 aa10.97□□□□□ -0.65
HMG20B-212ENST00000487894 SPANXA1Q9NS26 97 aa10.97□□□□□ -0.65
HMG20B-212ENST00000487894 RAB5AP20339 215 aa10.96□□□□□ -0.65
HMG20B-212ENST00000487894 S100PP25815 95 aa10.96□□□□□ -0.65
HMG20B-212ENST00000487894 RHEBQ15382 184 aa10.96□□□□□ -0.65
HMG20B-212ENST00000487894 Q8N8P6 123 aa10.96□□□□□ -0.65
HMG20B-212ENST00000487894 CIRBP-AS1Q8TBR5 109 aa10.96□□□□□ -0.65
HMG20B-212ENST00000487894 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.95□□□□□ -0.66
HMG20B-212ENST00000487894 TRAV13-1A0A0B4J241 112 aa10.95□□□□□ -0.66
HMG20B-212ENST00000487894 C1orf196B1AJZ1 125 aa10.95□□□□□ -0.66
HMG20B-212ENST00000487894 MRPS36P82909 103 aaKnown RBP10.95□□□□□ -0.66
HMG20B-212ENST00000487894 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
HMG20B-212ENST00000487894 OPRPNQ99935 248 aaPredicted RBP10.95□□□□□ -0.66
HMG20B-212ENST00000487894 IGHV1-58A0A0C4DH39 117 aa10.94□□□□□ -0.66
HMG20B-212ENST00000487894 FAM229AH3BQW9 127 aa10.94□□□□□ -0.66
HMG20B-212ENST00000487894 PANO1I0J062 215 aa10.94□□□□□ -0.66
HMG20B-212ENST00000487894 RPS10P5Q9NQ39 176 aa10.94□□□□□ -0.66
HMG20B-212ENST00000487894 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.94□□□□□ -0.66
HMG20B-212ENST00000487894 IGHV3-64A0A075B6Q5 118 aa10.93□□□□□ -0.66
HMG20B-212ENST00000487894 KIAA1644Q3SXP7 199 aa10.93□□□□□ -0.66
HMG20B-212ENST00000487894 IFI27P40305 119 aaPredicted RBP10.92□□□□□ -0.66
HMG20B-212ENST00000487894 GNB1LQ9BYB4 327 aa10.92□□□□□ -0.66
HMG20B-212ENST00000487894 PYGO1Q9Y3Y4 419 aa10.92□□□□□ -0.66
HMG20B-212ENST00000487894 CIRBPQ14011 172 aaKnown RBP10.91□□□□□ -0.66
HMG20B-212ENST00000487894 LINC00526Q96FQ7 95 aa10.91□□□□□ -0.66
HMG20B-212ENST00000487894 IGLV4-3A0A075B6K6 122 aa10.9□□□□□ -0.66
HMG20B-212ENST00000487894 IFITM10A6NMD0 228 aa10.9□□□□□ -0.66
HMG20B-212ENST00000487894 K7EMI3 77 aa10.9□□□□□ -0.66
HMG20B-212ENST00000487894 COX7A2LO14548 114 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms