RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 HIST1H2BMQ99879 126 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 CNFNQ9BYD5 112 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 TRAV26-2A0A0B4J265 109 aa8.02□□□□□ -1.13
SREBF1-215ENST00000487401 PPP1R2P9O14990 202 aa8.02□□□□□ -1.13
SREBF1-215ENST00000487401 GATCO43716 136 aaKnown RBP8.02□□□□□ -1.13
SREBF1-215ENST00000487401 RPL37AP61513 92 aaKnown RBP8.02□□□□□ -1.13
SREBF1-215ENST00000487401 SDIM1Q6ZPB5 146 aa8.02□□□□□ -1.13
SREBF1-215ENST00000487401 DPH3Q96FX2 82 aa8.02□□□□□ -1.13
SREBF1-215ENST00000487401 GFRA4Q9GZZ7 299 aa8.02□□□□□ -1.13
SREBF1-215ENST00000487401 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.01□□□□□ -1.13
SREBF1-215ENST00000487401 S100A2P29034 98 aa8.01□□□□□ -1.13
SREBF1-215ENST00000487401 KRTAP10-4P60372 401 aaPredicted RBP8.01□□□□□ -1.13
SREBF1-215ENST00000487401 CNBPP62633 177 aaKnown RBP8.01□□□□□ -1.13
SREBF1-215ENST00000487401 AMMECR1LQ6DCA0 310 aa8.01□□□□□ -1.13
SREBF1-215ENST00000487401 CFAP161Q6P656 301 aa8.01□□□□□ -1.13
SREBF1-215ENST00000487401 BTF3L4Q96K17 158 aa8.01□□□□□ -1.13
SREBF1-215ENST00000487401 IMMP2LQ96T52 175 aa8.01□□□□□ -1.13
SREBF1-215ENST00000487401 IGHV3-64A0A075B6Q5 118 aa8□□□□□ -1.13
SREBF1-215ENST00000487401 IGKV3OR2-268A0A0C4DH90 116 aa8□□□□□ -1.13
SREBF1-215ENST00000487401 GAGE12HA6NDE8 117 aa8□□□□□ -1.13
SREBF1-215ENST00000487401 IFITM10A6NMD0 228 aa8□□□□□ -1.13
SREBF1-215ENST00000487401 A8MWL6 223 aa8□□□□□ -1.13
SREBF1-215ENST00000487401 NCR2O95944 276 aa8□□□□□ -1.13
SREBF1-215ENST00000487401 OXTP01178 125 aa8□□□□□ -1.13
SREBF1-215ENST00000487401 FOXA3P55318 350 aaPredicted RBP8□□□□□ -1.13
SREBF1-215ENST00000487401 CTAG1AP78358 180 aa8□□□□□ -1.13
SREBF1-215ENST00000487401 LINC01551Q86U37 167 aa8□□□□□ -1.13
SREBF1-215ENST00000487401 HIST3H2BBQ8N257 126 aa8□□□□□ -1.13
SREBF1-215ENST00000487401 GTSF1Q8WW33 167 aa8□□□□□ -1.13
SREBF1-215ENST00000487401 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8□□□□□ -1.13
SREBF1-215ENST00000487401 FAT3Q8TDW7 4589 aa7.99□□□□□ -1.13
SREBF1-215ENST00000487401 RNASEKQ6P5S7 137 aaKnown RBP7.99□□□□□ -1.13
SREBF1-215ENST00000487401 FAM231DQ6ZW35 169 aa7.99□□□□□ -1.13
SREBF1-215ENST00000487401 BORCS7Q96B45 105 aa7.99□□□□□ -1.13
SREBF1-215ENST00000487401 RPL39LQ96EH5 51 aaKnown RBP7.99□□□□□ -1.13
SREBF1-215ENST00000487401 LRP1Q07954 4544 aaKnown RBP7.98□□□□□ -1.13
SREBF1-215ENST00000487401 APCSP02743 223 aa7.98□□□□□ -1.13
SREBF1-215ENST00000487401 PMCHP20382 165 aa7.98□□□□□ -1.13
SREBF1-215ENST00000487401 COA6Q5JTJ3 125 aaKnown RBP7.98□□□□□ -1.13
SREBF1-215ENST00000487401 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.97□□□□□ -1.13
SREBF1-215ENST00000487401 IGKV2-29A2NJV5 120 aaPredicted RBP7.97□□□□□ -1.13
SREBF1-215ENST00000487401 SDHAF1A6NFY7 115 aa7.97□□□□□ -1.13
SREBF1-215ENST00000487401 H7C423 109 aa7.97□□□□□ -1.13
SREBF1-215ENST00000487401 PANO1I0J062 215 aa7.97□□□□□ -1.13
SREBF1-215ENST00000487401 TRAV9-1A0A075B6T8 112 aa7.96□□□□□ -1.14
SREBF1-215ENST00000487401 I3L3M4 83 aa7.96□□□□□ -1.14
SREBF1-215ENST00000487401 SLPIP03973 132 aa7.96□□□□□ -1.14
SREBF1-215ENST00000487401 FGF6P10767 208 aa7.96□□□□□ -1.14
SREBF1-215ENST00000487401 CT83Q5H943 113 aa7.96□□□□□ -1.14
SREBF1-215ENST00000487401 OR10D4PQ8NGN7 298 aa7.96□□□□□ -1.14
SREBF1-215ENST00000487401 CHCHD10Q8WYQ3 142 aaPredicted RBP7.96□□□□□ -1.14
SREBF1-215ENST00000487401 RNF185Q96GF1 192 aa7.96□□□□□ -1.14
SREBF1-215ENST00000487401 TMEM101Q96IK0 257 aa7.96□□□□□ -1.14
SREBF1-215ENST00000487401 PYY3Q5JQD4 70 aa7.95□□□□□ -1.14
SREBF1-215ENST00000487401 SERTAD4-AS1Q5TG53 156 aa7.95□□□□□ -1.14
SREBF1-215ENST00000487401 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
SREBF1-215ENST00000487401 PKHD1L1Q86WI1 4243 aa7.95□□□□□ -1.14
SREBF1-215ENST00000487401 TRBV6-5A0A0K0K1A5 114 aa7.94□□□□□ -1.14
SREBF1-215ENST00000487401 A0A1B0GUT8 65 aa7.94□□□□□ -1.14
SREBF1-215ENST00000487401 CHTF8P0CG12 524 aa7.94□□□□□ -1.14
SREBF1-215ENST00000487401 ZNF25P17030 456 aaPredicted RBP7.94□□□□□ -1.14
SREBF1-215ENST00000487401 CIRBPQ14011 172 aaKnown RBP7.94□□□□□ -1.14
SREBF1-215ENST00000487401 HIGD2BQ4VC39 106 aa7.94□□□□□ -1.14
SREBF1-215ENST00000487401 C15orf56Q8N910 161 aa7.94□□□□□ -1.14
SREBF1-215ENST00000487401 TSKUQ8WUA8 353 aa7.94□□□□□ -1.14
SREBF1-215ENST00000487401 A0A087WYN8 130 aa7.93□□□□□ -1.14
SREBF1-215ENST00000487401 HIGD1CA8MV81 97 aa7.93□□□□□ -1.14
SREBF1-215ENST00000487401 LINC00587B1AMM8 73 aa7.93□□□□□ -1.14
SREBF1-215ENST00000487401 OR5A1Q8NGJ0 315 aa7.93□□□□□ -1.14
SREBF1-215ENST00000487401 HIST1H2BLQ99880 126 aa7.93□□□□□ -1.14
SREBF1-215ENST00000487401 TMEM191AQ9H0A3 160 aa7.93□□□□□ -1.14
SREBF1-215ENST00000487401 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
SREBF1-215ENST00000487401 HMCN2Q8NDA2 5059 aa7.92□□□□□ -1.14
SREBF1-215ENST00000487401 FAM231BA6NCW3 169 aa7.92□□□□□ -1.14
SREBF1-215ENST00000487401 TSHBP01222 138 aa7.92□□□□□ -1.14
SREBF1-215ENST00000487401 FABP4P15090 132 aa7.92□□□□□ -1.14
SREBF1-215ENST00000487401 XCL1P47992 114 aa7.92□□□□□ -1.14
SREBF1-215ENST00000487401 HNRNPA3P51991 378 aaKnown RBP7.92□□□□□ -1.14
SREBF1-215ENST00000487401 COX6A2Q02221 97 aa7.92□□□□□ -1.14
SREBF1-215ENST00000487401 SPACA4Q8TDM5 124 aa7.92□□□□□ -1.14
SREBF1-215ENST00000487401 MRAP2Q96G30 205 aa7.92□□□□□ -1.14
SREBF1-215ENST00000487401 TRAPPC1Q9Y5R8 145 aa7.92□□□□□ -1.14
SREBF1-215ENST00000487401 GAS8-AS1O95177 125 aa7.91□□□□□ -1.14
SREBF1-215ENST00000487401 FOXI1Q12951 378 aa7.91□□□□□ -1.14
SREBF1-215ENST00000487401 RIGQ13278 110 aa7.91□□□□□ -1.14
SREBF1-215ENST00000487401 MAJINQ3KP22 176 aa7.91□□□□□ -1.14
SREBF1-215ENST00000487401 PDZD11Q5EBL8 140 aa7.91□□□□□ -1.14
SREBF1-215ENST00000487401 C7orf33Q8WU49 177 aa7.91□□□□□ -1.14
SREBF1-215ENST00000487401 PACRGQ96M98 296 aaPredicted RBP7.91□□□□□ -1.14
SREBF1-215ENST00000487401 PLAC8Q9NZF1 115 aa7.91□□□□□ -1.14
SREBF1-215ENST00000487401 GVQW2A0A096LPI5 108 aaPredicted RBP7.9□□□□□ -1.14
SREBF1-215ENST00000487401 LINC00959A0A1B0GUT2 108 aa7.9□□□□□ -1.14
SREBF1-215ENST00000487401 CCL25O15444 150 aa7.9□□□□□ -1.14
SREBF1-215ENST00000487401 ESDP10768 282 aa7.9□□□□□ -1.14
SREBF1-215ENST00000487401 RAB4AP20338 218 aa7.9□□□□□ -1.14
SREBF1-215ENST00000487401 JOSD1Q15040 202 aaPredicted RBP7.9□□□□□ -1.14
SREBF1-215ENST00000487401 SS18Q15532 418 aa7.9□□□□□ -1.14
SREBF1-215ENST00000487401 AMN1Q8IY45 258 aa7.9□□□□□ -1.14
SREBF1-215ENST00000487401 IGHV1-58A0A0C4DH39 117 aa7.89□□□□□ -1.15
SREBF1-215ENST00000487401 IGKV2-24A0A0C4DH68 120 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms