RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 GAGE13Q4V321 117 aa12.11□□□□□ -0.47
FDPS-212ENST00000487002 FAM19A3Q7Z5A8 133 aa12.11□□□□□ -0.47
FDPS-212ENST00000487002 WFDC10AQ9H1F0 79 aa12.11□□□□□ -0.47
FDPS-212ENST00000487002 PRO1854Q9UHT4 67 aa12.11□□□□□ -0.47
FDPS-212ENST00000487002 ACANP16112 2415 aa12.11□□□□□ -0.47
FDPS-212ENST00000487002 TRAV8-3A0A0A6YYJ7 113 aa12.1□□□□□ -0.47
FDPS-212ENST00000487002 A0A0B4J2C4 111 aa12.1□□□□□ -0.47
FDPS-212ENST00000487002 RPL35AP18077 110 aaKnown RBP12.1□□□□□ -0.47
FDPS-212ENST00000487002 PRO0461Q9UI25 63 aa12.1□□□□□ -0.47
FDPS-212ENST00000487002 UNC79Q9P2D8 2635 aa12.1□□□□□ -0.47
FDPS-212ENST00000487002 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.1□□□□□ -0.47
FDPS-212ENST00000487002 NDUFA12Q9UI09 145 aa12.1□□□□□ -0.47
FDPS-212ENST00000487002 A4D1N5 150 aa12.09□□□□□ -0.47
FDPS-212ENST00000487002 ZFAND6Q6FIF0 208 aa12.09□□□□□ -0.47
FDPS-212ENST00000487002 SBSPONQ8IVN8 264 aa12.09□□□□□ -0.47
FDPS-212ENST00000487002 LITAFQ99732 161 aa12.09□□□□□ -0.47
FDPS-212ENST00000487002 GTSF1LQ9H1H1 148 aa12.09□□□□□ -0.47
FDPS-212ENST00000487002 ITPR2Q14571 2701 aa12.09□□□□□ -0.47
FDPS-212ENST00000487002 HERVK_113P63121 156 aa12.08□□□□□ -0.48
FDPS-212ENST00000487002 SPANXDQ9BXN6 97 aa12.08□□□□□ -0.48
FDPS-212ENST00000487002 SPANXCQ9NY87 97 aa12.08□□□□□ -0.48
FDPS-212ENST00000487002 TRBV6-4A0A1B0GX49 114 aa12.08□□□□□ -0.48
FDPS-212ENST00000487002 SPINK8P0C7L1 97 aa12.08□□□□□ -0.48
FDPS-212ENST00000487002 TRBV20-1A0A075B6N2 111 aa12.07□□□□□ -0.48
FDPS-212ENST00000487002 LOC107984156A0A0G2JMH3 177 aa12.07□□□□□ -0.48
FDPS-212ENST00000487002 WFDC2Q14508 124 aa12.07□□□□□ -0.48
FDPS-212ENST00000487002 NTM-AS1Q6ZSK4 140 aa12.07□□□□□ -0.48
FDPS-212ENST00000487002 MUSTN1Q8IVN3 82 aa12.07□□□□□ -0.48
FDPS-212ENST00000487002 ARL17AQ8IVW1 177 aa12.07□□□□□ -0.48
FDPS-212ENST00000487002 TRGV2A0A075B6R0 118 aa12.06□□□□□ -0.48
FDPS-212ENST00000487002 TEX48A0A1B0GUV7 120 aa12.06□□□□□ -0.48
FDPS-212ENST00000487002 TIMM17BO60830 172 aa12.06□□□□□ -0.48
FDPS-212ENST00000487002 LINC00482Q8N8I6 264 aa12.06□□□□□ -0.48
FDPS-212ENST00000487002 CDKN2A-AS1Q9UH64 79 aa12.06□□□□□ -0.48
FDPS-212ENST00000487002 MTORP42345 2549 aa12.06□□□□□ -0.48
FDPS-212ENST00000487002 GAGE12JA6NER3 117 aa12.06□□□□□ -0.48
FDPS-212ENST00000487002 PF4P02776 101 aa12.06□□□□□ -0.48
FDPS-212ENST00000487002 GAGE4Q13068 117 aa12.06□□□□□ -0.48
FDPS-212ENST00000487002 GAGE5Q13069 117 aa12.06□□□□□ -0.48
FDPS-212ENST00000487002 SETXQ7Z333 2677 aaKnown RBP12.06□□□□□ -0.48
FDPS-212ENST00000487002 H7C423 109 aa12.05□□□□□ -0.48
FDPS-212ENST00000487002 GAGE7O76087 117 aa12.05□□□□□ -0.48
FDPS-212ENST00000487002 GAGE12FP0CL80 117 aa12.05□□□□□ -0.48
FDPS-212ENST00000487002 GAGE12GP0CL81 117 aa12.05□□□□□ -0.48
FDPS-212ENST00000487002 GAGE12IP0CL82 117 aa12.05□□□□□ -0.48
FDPS-212ENST00000487002 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
FDPS-212ENST00000487002 SMR3AQ99954 134 aa12.05□□□□□ -0.48
FDPS-212ENST00000487002 KRTAP10-3P60369 221 aa12.04□□□□□ -0.48
FDPS-212ENST00000487002 IGLV5-39A0A0G2JS06 123 aa12.04□□□□□ -0.48
FDPS-212ENST00000487002 J3QR89 54 aa12.04□□□□□ -0.48
FDPS-212ENST00000487002 NDUFA1O15239 70 aa12.04□□□□□ -0.48
FDPS-212ENST00000487002 LY6G6DO95868 133 aa12.04□□□□□ -0.48
FDPS-212ENST00000487002 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
FDPS-212ENST00000487002 PCP4P48539 62 aa12.04□□□□□ -0.48
FDPS-212ENST00000487002 MIAQ16674 131 aa12.04□□□□□ -0.48
FDPS-212ENST00000487002 LINC00242Q5T6M2 205 aa12.04□□□□□ -0.48
FDPS-212ENST00000487002 RNF183Q96D59 192 aa12.04□□□□□ -0.48
FDPS-212ENST00000487002 FASNP49327 2511 aaKnown RBP12.04□□□□□ -0.48
FDPS-212ENST00000487002 TMEM243Q9BU79 118 aa12.03□□□□□ -0.48
FDPS-212ENST00000487002 GCN1Q92616 2671 aaKnown RBP12.03□□□□□ -0.48
FDPS-212ENST00000487002 EIF4EBP3O60516 100 aaPredicted RBP12.03□□□□□ -0.48
FDPS-212ENST00000487002 PSMB2P49721 201 aa12.03□□□□□ -0.48
FDPS-212ENST00000487002 TMEM101Q96IK0 257 aa12.03□□□□□ -0.48
FDPS-212ENST00000487002 CDC42SE2Q9NRR3 84 aa12.03□□□□□ -0.48
FDPS-212ENST00000487002 HIVEP2P31629 2446 aa12.02□□□□□ -0.49
FDPS-212ENST00000487002 ATP6V0E2Q8NHE4 81 aa12.02□□□□□ -0.49
FDPS-212ENST00000487002 ERG28Q9UKR5 140 aa12.02□□□□□ -0.49
FDPS-212ENST00000487002 UBE2L6O14933 153 aa12.01□□□□□ -0.49
FDPS-212ENST00000487002 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.01□□□□□ -0.49
FDPS-212ENST00000487002 SETD2Q9BYW2 2564 aaPredicted RBP12.01□□□□□ -0.49
FDPS-212ENST00000487002 TRGV4A0A0C4DH28 118 aa12.01□□□□□ -0.49
FDPS-212ENST00000487002 TCL1BO95988 128 aa12.01□□□□□ -0.49
FDPS-212ENST00000487002 IFITM1P13164 125 aa12.01□□□□□ -0.49
FDPS-212ENST00000487002 INSL3P51460 131 aa12.01□□□□□ -0.49
FDPS-212ENST00000487002 COX6A2Q02221 97 aa12.01□□□□□ -0.49
FDPS-212ENST00000487002 ETDBQ3ZM63 59 aa12.01□□□□□ -0.49
FDPS-212ENST00000487002 A8MZ25 164 aa12□□□□□ -0.49
FDPS-212ENST00000487002 ADAMTSL4-AS1Q5T5F5 129 aa12□□□□□ -0.49
FDPS-212ENST00000487002 SFTA2Q6UW10 78 aa12□□□□□ -0.49
FDPS-212ENST00000487002 FHL2Q14192 279 aa11.99□□□□□ -0.49
FDPS-212ENST00000487002 KIR2DL5BQ8NHK3 375 aa11.99□□□□□ -0.49
FDPS-212ENST00000487002 JMJD1CQ15652 2540 aa11.99□□□□□ -0.49
FDPS-212ENST00000487002 LINC00612Q8N6U2 182 aa11.99□□□□□ -0.49
FDPS-212ENST00000487002 SMIM1B2RUZ4 78 aa11.98□□□□□ -0.49
FDPS-212ENST00000487002 SH2D6Q7Z4S9 175 aa11.98□□□□□ -0.49
FDPS-212ENST00000487002 MTURNQ8N3F0 131 aa11.98□□□□□ -0.49
FDPS-212ENST00000487002 PRSS2P07478 247 aa11.98□□□□□ -0.49
FDPS-212ENST00000487002 SCGB1C2P0DMR2 95 aa11.98□□□□□ -0.49
FDPS-212ENST00000487002 SMCPP49901 116 aaPredicted RBP11.98□□□□□ -0.49
FDPS-212ENST00000487002 CIRBPQ14011 172 aaKnown RBP11.98□□□□□ -0.49
FDPS-212ENST00000487002 TRAV13-1A0A0B4J241 112 aa11.97□□□□□ -0.49
FDPS-212ENST00000487002 LOC100131303A0A0U1RQF7 123 aa11.96□□□□□ -0.49
FDPS-212ENST00000487002 SMIM9A6NGZ8 99 aa11.96□□□□□ -0.49
FDPS-212ENST00000487002 C9orf66Q5T8R8 295 aa11.96□□□□□ -0.49
FDPS-212ENST00000487002 TRBV30A0A0K0K1B3 111 aa11.96□□□□□ -0.5
FDPS-212ENST00000487002 F5H768 121 aa11.96□□□□□ -0.5
FDPS-212ENST00000487002 Q1RN00 199 aa11.95□□□□□ -0.5
FDPS-212ENST00000487002 TRBV6-8A0A0A6YYG3 113 aa11.94□□□□□ -0.5
FDPS-212ENST00000487002 M0QXV9 152 aa11.94□□□□□ -0.5
FDPS-212ENST00000487002 CRLF1O75462 422 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms