RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 IGLV1-50A0A075B6I6 118 aa11.58□□□□□ -0.56
CHRD-216ENST00000486066 TRBV6-5A0A0K0K1A5 114 aa11.58□□□□□ -0.56
CHRD-216ENST00000486066 H2AFB1P0C5Y9 115 aa11.58□□□□□ -0.56
CHRD-216ENST00000486066 TWIST1Q15672 202 aa11.58□□□□□ -0.56
CHRD-216ENST00000486066 ISOC2Q96AB3 205 aa11.58□□□□□ -0.56
CHRD-216ENST00000486066 MANBALQ9NQG1 85 aa11.58□□□□□ -0.56
CHRD-216ENST00000486066 TSHBP01222 138 aa11.57□□□□□ -0.56
CHRD-216ENST00000486066 FOXA3P55318 350 aaPredicted RBP11.57□□□□□ -0.56
CHRD-216ENST00000486066 ZNF345Q14585 488 aa11.57□□□□□ -0.56
CHRD-216ENST00000486066 I3L3M4 83 aa11.56□□□□□ -0.56
CHRD-216ENST00000486066 GNG4P50150 75 aa11.56□□□□□ -0.56
CHRD-216ENST00000486066 SS18Q15532 418 aa11.56□□□□□ -0.56
CHRD-216ENST00000486066 NUDT10Q8NFP7 164 aa11.56□□□□□ -0.56
CHRD-216ENST00000486066 NUDT11Q96G61 164 aa11.56□□□□□ -0.56
CHRD-216ENST00000486066 BTF3L4Q96K17 158 aa11.56□□□□□ -0.56
CHRD-216ENST00000486066 C2orf48Q96LS8 159 aa11.56□□□□□ -0.56
CHRD-216ENST00000486066 TRAV1-1A0A0B4J248 108 aa11.55□□□□□ -0.56
CHRD-216ENST00000486066 TEX261Q6UWH6 196 aa11.55□□□□□ -0.56
CHRD-216ENST00000486066 TMEM101Q96IK0 257 aa11.55□□□□□ -0.56
CHRD-216ENST00000486066 EIF5AP63241 154 aaKnown RBP11.54□□□□□ -0.56
CHRD-216ENST00000486066 EIF5AL1Q6IS14 154 aaKnown RBP11.54□□□□□ -0.56
CHRD-216ENST00000486066 FAM210AQ96ND0 272 aa11.54□□□□□ -0.56
CHRD-216ENST00000486066 GNG13Q9P2W3 67 aa11.54□□□□□ -0.56
CHRD-216ENST00000486066 BCL2L11O43521 198 aa11.53□□□□□ -0.56
CHRD-216ENST00000486066 RNF151Q2KHN1 245 aa11.53□□□□□ -0.56
CHRD-216ENST00000486066 PRR4Q16378 134 aa11.52□□□□□ -0.57
CHRD-216ENST00000486066 CAMK2N2Q96S95 79 aa11.52□□□□□ -0.57
CHRD-216ENST00000486066 SMLR1H3BR10 107 aa11.51□□□□□ -0.57
CHRD-216ENST00000486066 COX7A2LO14548 114 aa11.51□□□□□ -0.57
CHRD-216ENST00000486066 PMCHP20382 165 aa11.51□□□□□ -0.57
CHRD-216ENST00000486066 POLR2KP53803 58 aaKnown RBP11.51□□□□□ -0.57
CHRD-216ENST00000486066 MRAP2Q96G30 205 aa11.51□□□□□ -0.57
CHRD-216ENST00000486066 RNASE7Q9H1E1 156 aaKnown RBP11.51□□□□□ -0.57
CHRD-216ENST00000486066 BIN3Q9NQY0 253 aa11.51□□□□□ -0.57
CHRD-216ENST00000486066 TMEM242Q9NWH2 141 aa11.51□□□□□ -0.57
CHRD-216ENST00000486066 C1orf196B1AJZ1 125 aa11.5□□□□□ -0.57
CHRD-216ENST00000486066 RPL18AQ02543 176 aaKnown RBP11.5□□□□□ -0.57
CHRD-216ENST00000486066 KRTAP7-1Q8IUC3 87 aa11.5□□□□□ -0.57
CHRD-216ENST00000486066 OPRPNQ99935 248 aaPredicted RBP11.5□□□□□ -0.57
CHRD-216ENST00000486066 RPP21Q9H633 154 aaKnown RBP11.5□□□□□ -0.57
CHRD-216ENST00000486066 TRBV27A0A0K0K1C4 114 aa11.49□□□□□ -0.57
CHRD-216ENST00000486066 K7EN84 100 aa11.49□□□□□ -0.57
CHRD-216ENST00000486066 CSDC2Q9Y534 153 aaKnown RBP11.49□□□□□ -0.57
CHRD-216ENST00000486066 FAM168BA1KXE4 195 aa11.48□□□□□ -0.57
CHRD-216ENST00000486066 PDE6DO43924 150 aa11.48□□□□□ -0.57
CHRD-216ENST00000486066 MALP21145 153 aa11.47□□□□□ -0.57
CHRD-216ENST00000486066 MRPL35Q9NZE8 188 aaKnown RBP11.47□□□□□ -0.57
CHRD-216ENST00000486066 A0A087WZ39 114 aa11.46□□□□□ -0.57
CHRD-216ENST00000486066 C7orf77A4D0Y5 90 aa11.46□□□□□ -0.57
CHRD-216ENST00000486066 HMSDA8MTL9 139 aa11.46□□□□□ -0.57
CHRD-216ENST00000486066 TSKUQ8WUA8 353 aa11.46□□□□□ -0.57
CHRD-216ENST00000486066 TLX1NBP0CAT3 122 aa11.45□□□□□ -0.58
CHRD-216ENST00000486066 RPL13AP40429 203 aaKnown RBP11.45□□□□□ -0.58
CHRD-216ENST00000486066 ST20Q9HBF5 79 aa11.45□□□□□ -0.58
CHRD-216ENST00000486066 MED9Q9NWA0 146 aa11.45□□□□□ -0.58
CHRD-216ENST00000486066 UBE2D4Q9Y2X8 147 aa11.45□□□□□ -0.58
CHRD-216ENST00000486066 SPAG11BQ08648 103 aa11.44□□□□□ -0.58
CHRD-216ENST00000486066 SMIM15Q7Z3B0 74 aa11.44□□□□□ -0.58
CHRD-216ENST00000486066 C5orf38Q86SI9 138 aa11.43□□□□□ -0.58
CHRD-216ENST00000486066 OR10D4PQ8NGN7 298 aa11.43□□□□□ -0.58
CHRD-216ENST00000486066 OCC1Q8TAD7 63 aa11.43□□□□□ -0.58
CHRD-216ENST00000486066 CARHSP1Q9Y2V2 147 aaKnown RBP11.43□□□□□ -0.58
CHRD-216ENST00000486066 KANTRA0A1W2PQU2 76 aa11.41□□□□□ -0.58
CHRD-216ENST00000486066 F8WDY8 70 aa11.41□□□□□ -0.58
CHRD-216ENST00000486066 RNASE13Q5GAN3 156 aaKnown RBP11.41□□□□□ -0.58
CHRD-216ENST00000486066 C10orf25Q5T742 122 aa11.41□□□□□ -0.58
CHRD-216ENST00000486066 FAM104AQ969W3 186 aa11.41□□□□□ -0.58
CHRD-216ENST00000486066 UBE2D1P51668 147 aa11.4□□□□□ -0.58
CHRD-216ENST00000486066 IMMP2LQ96T52 175 aa11.4□□□□□ -0.58
CHRD-216ENST00000486066 TRAV13-1A0A0B4J241 112 aa11.39□□□□□ -0.59
CHRD-216ENST00000486066 Q6ZUT4 128 aa11.39□□□□□ -0.59
CHRD-216ENST00000486066 TMEM191AQ9H0A3 160 aa11.39□□□□□ -0.59
CHRD-216ENST00000486066 IGHV3OR16-9A0A0B4J2B5 98 aa11.38□□□□□ -0.59
CHRD-216ENST00000486066 RAB4AP20338 218 aa11.38□□□□□ -0.59
CHRD-216ENST00000486066 FAM231DQ6ZW35 169 aa11.38□□□□□ -0.59
CHRD-216ENST00000486066 FAM19A5Q7Z5A7 132 aaPredicted RBP11.38□□□□□ -0.59
CHRD-216ENST00000486066 SMDT1Q9H4I9 107 aa11.38□□□□□ -0.59
CHRD-216ENST00000486066 C6orf48Q9UBA6 75 aa11.38□□□□□ -0.59
CHRD-216ENST00000486066 TIMM21Q9BVV7 248 aa11.37□□□□□ -0.59
CHRD-216ENST00000486066 CT83Q5H943 113 aa11.36□□□□□ -0.59
CHRD-216ENST00000486066 NRACQ8N912 160 aa11.36□□□□□ -0.59
CHRD-216ENST00000486066 A8MWL6 223 aa11.35□□□□□ -0.59
CHRD-216ENST00000486066 TEX46H3BTG2 121 aa11.35□□□□□ -0.59
CHRD-216ENST00000486066 VCYO14598 125 aa11.35□□□□□ -0.59
CHRD-216ENST00000486066 NDUFA1O15239 70 aa11.35□□□□□ -0.59
CHRD-216ENST00000486066 TMEM241Q24JQ0 296 aa11.35□□□□□ -0.59
CHRD-216ENST00000486066 UNQ6190/PRO20217Q6UXQ8 127 aa11.35□□□□□ -0.59
CHRD-216ENST00000486066 ORAOV1Q8WV07 137 aa11.35□□□□□ -0.59
CHRD-216ENST00000486066 M0QXV9 152 aa11.34□□□□□ -0.59
CHRD-216ENST00000486066 GATCO43716 136 aaKnown RBP11.33□□□□□ -0.6
CHRD-216ENST00000486066 KIAA0087Q14695 138 aa11.33□□□□□ -0.6
CHRD-216ENST00000486066 AMN1Q8IY45 258 aa11.33□□□□□ -0.6
CHRD-216ENST00000486066 ZNF861PO60384 105 aa11.32□□□□□ -0.6
CHRD-216ENST00000486066 SMAGPQ0VAQ4 97 aa11.32□□□□□ -0.6
CHRD-216ENST00000486066 C9orf129Q5T035 196 aaKnown RBP11.32□□□□□ -0.6
CHRD-216ENST00000486066 A0A087X002 238 aa11.31□□□□□ -0.6
CHRD-216ENST00000486066 A0A1B0GUT8 65 aa11.31□□□□□ -0.6
CHRD-216ENST00000486066 SMKR1H3BMG3 65 aa11.31□□□□□ -0.6
CHRD-216ENST00000486066 TSPAN13O95857 204 aa11.31□□□□□ -0.6
CHRD-216ENST00000486066 FCER1GP30273 86 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms