RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 CEMP1Q6PRD7 247 aaPredicted RBP3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 SOSTDC1Q6X4U4 206 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 Q6ZSV7 163 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 C11orf72Q8NBR9 251 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 CHCHD5Q9BSY4 110 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 Q9H8V8 135 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 VPREB3Q9UKI3 123 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 C22orf24Q9Y442 160 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 CSDC2Q9Y534 153 aaKnown RBP3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 CACNA1HO95180 2353 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 ARHGAP32A7KAX9 2087 aa3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 IGKV2-29A2NJV5 120 aaPredicted RBP3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 A8MZ25 164 aa3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 F5H768 121 aa3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 IGKV3-20P01619 116 aa3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 PROK1P58294 105 aa3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 DAZ2Q13117 558 aaKnown RBP3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 TMEM95Q3KNT9 176 aa3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 RNASE13Q5GAN3 156 aaKnown RBP3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 LINC00242Q5T6M2 205 aa3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 C9orf153Q5TBE3 101 aa3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 DAZ4Q86SG3 579 aaKnown RBP3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 OBSCN-AS1Q96MR7 158 aa3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 DAZ3Q9NR90 486 aaKnown RBP3.35□□□□□ -1.87
SMARCC1-206ENST00000485737 HRNRQ86YZ3 2850 aaPredicted RBP3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 RP1L1Q8IWN7 2480 aaPredicted RBP3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 KALRNO60229 2985 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 TRAV13-2A0A0B4J235 113 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 TRBV10-1A0A0K0K1A3 114 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 ATOX1O00244 68 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 INSP01308 110 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 MSMBP08118 114 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 CRYGAP11844 174 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 COX7CP15954 63 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 HOXD3P31249 432 aaPredicted RBP3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 RPL28P46779 137 aaKnown RBP3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 SYNJ2BPP57105 145 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 NPC2P61916 151 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 Q6JHZ5 121 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 LRRC75A-AS1Q8N1F1 130 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 Q8N2B8 174 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 NRGNQ92686 78 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 UBE2E2Q96LR5 201 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 C2orf48Q96LS8 159 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 FAM218AQ96MZ4 157 aa3.34□□□□□ -1.87
SMARCC1-206ENST00000485737 MUC3AQ02505 3323 aa3.34□□□□□ -1.88
SMARCC1-206ENST00000485737 POLEQ07864 2286 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 DMXL2Q8TDJ6 3036 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 AKAP13Q12802 2813 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 IGHV3-73A0A0B4J1V6 119 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 KNCNA6PVL3 124 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 J3KT08 172 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 CRPP02741 224 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 BAALC-AS2P0C853 105 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 MALP21145 153 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 COX6A2Q02221 97 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 HIST2H2BCQ6DN03 193 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 HIST2H2BDQ6DRA6 164 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 DUX5Q96PT3 197 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 Q9UF83 564 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 ADGRG4Q8IZF6 3080 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 BOD1L1Q8NFC6 3051 aa3.33□□□□□ -1.88
SMARCC1-206ENST00000485737 ZNF292O60281 2723 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 IGHV4-30-2A0A087WSY4 118 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 B4DSR2 109 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 C19orf84I3L1E1 186 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 J3QLI3 93 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 DNAL4O96015 105 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 IGHV4-59P01825 116 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 DEFB131AP59861 70 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 RPS28P62857 69 aaKnown RBP3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 RPL18AQ02543 176 aaKnown RBP3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 DGAT2L7PQ6IED9 249 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 C1orf43Q9BWL3 253 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 MAP6D1Q9H9H5 199 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 ABCA2Q9BZC7 2435 aa3.32□□□□□ -1.88
SMARCC1-206ENST00000485737 SPTBN2O15020 2390 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 CACNA1BQ00975 2339 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 ABCA4P78363 2273 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 IGKV2-28A0A075B6P5 120 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 IGHV3-38A0A0C4DH36 116 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 H0YGX0 51 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 K7EQD1 137 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 LY6G6DO95868 133 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 IGKV2D-28P01615 120 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 LINC00694P0DN24 101 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 DSCR9P59020 149 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 TMEM258P61165 79 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 RPL36AP83881 106 aaKnown RBP3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 DEFB112Q30KQ8 113 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 ATP5EP2Q5VTU8 51 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 GAGE2AQ6NT46 116 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 C10orf99Q6UWK7 81 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 LINC00337Q8N6G1 96 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 RPL36ALQ969Q0 106 aaKnown RBP3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 LINC00167Q96N53 147 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 CCL19Q99731 98 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms