RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 ANKRD31Q8N7Z5 1873 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 PLXNA4Q9HCM2 1894 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 MICAL3Q7RTP6 2002 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 RGPD2P0DJD1 1756 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 PATJQ8NI35 1801 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 ROBO1Q9Y6N7 1651 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 SLIT1O75093 1534 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 HEATR5AQ86XA9 2040 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 RALGAPA2Q2PPJ7 1873 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 TNS1Q9HBL0 1735 aaKnown RBP1.1□□□□□ -2.23
ITGB1-213ENST00000484088 SAMD9LQ8IVG5 1584 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 TRAV12-1A0A0B4J245 112 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 C17orf98A8MV24 154 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 K7EMI3 77 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 IGLV3-19P01714 112 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 PRB4P10163 310 aaPredicted RBP1.1□□□□□ -2.23
ITGB1-213ENST00000484088 S100A3P33764 101 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 Q9BRP9 147 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 NDUFA4L2Q9NRX3 87 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 RGPD3A6NKT7 1758 aaPredicted RBP1.1□□□□□ -2.23
ITGB1-213ENST00000484088 TET3O43151 1660 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 IQGAP1P46940 1657 aa1.1□□□□□ -2.23
ITGB1-213ENST00000484088 FAM208AQ9UK61 1670 aaKnown RBP1.1□□□□□ -2.23
ITGB1-213ENST00000484088 PDCD11Q14690 1871 aaKnown RBP1.09□□□□□ -2.23
ITGB1-213ENST00000484088 COL18A1P39060 1754 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 MCM3APO60318 1980 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 C2orf16Q68DN1 1984 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 THADAQ6YHU6 1953 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 KIF21BO75037 1637 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 PHRF1Q9P1Y6 1649 aaKnown RBP1.09□□□□□ -2.23
ITGB1-213ENST00000484088 ALKQ9UM73 1620 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 IGKV1D-42A0A075B6H8 117 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 IGKV3D-7A0A0C4DH55 119 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 A0A0J9YY99 117 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 TRBV7-4A0A0J9YYF1 115 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 TRBV6-5A0A0K0K1A5 114 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 F8VRH5 84 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 J3QRE1 110 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 M0R3E3 92 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 IGKV1-17P01599 117 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 IGHV3-30P01768 117 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 CLPSP04118 112 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 MGPP08493 103 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 IGHV3-30-5P0DP03 117 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 PDE6HQ13956 83 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 FAM229BQ4G0N7 80 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 C1orf137Q5JT78 98 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 GDF5OSQ5U4N7 250 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.09□□□□□ -2.23
ITGB1-213ENST00000484088 LINC00304Q8N9R0 145 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 C1orf64Q8NEQ6 169 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 TMEM263Q8WUH6 116 aaKnown RBP1.09□□□□□ -2.23
ITGB1-213ENST00000484088 PRR15LQ9BU68 103 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 MRPL36Q9P0J6 103 aaKnown RBP1.09□□□□□ -2.23
ITGB1-213ENST00000484088 TMEM14CQ9P0S9 112 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 SNURFQ9Y675 71 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 DOCK2Q92608 1830 aa1.09□□□□□ -2.23
ITGB1-213ENST00000484088 CD163L1Q9NR16 1453 aa1.09□□□□□ -2.24
ITGB1-213ENST00000484088 PKD1L3Q7Z443 1732 aa1.09□□□□□ -2.24
ITGB1-213ENST00000484088 HELZP42694 1942 aaKnown RBP1.09□□□□□ -2.24
ITGB1-213ENST00000484088 KDM3BQ7LBC6 1761 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 NUP98P52948 1817 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 AFDNP55196 1824 aaKnown RBP1.08□□□□□ -2.24
ITGB1-213ENST00000484088 OBSL1O75147 1896 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 DOCK1Q14185 1865 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 PLCH1Q4KWH8 1693 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 NHSQ6T4R5 1651 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 A0A0J9YX75 114 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 LINC01546A6NGU7 62 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 B4DSR2 109 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 H0YGX0 51 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 UQCR11O14957 56 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 SPINK4O60575 86 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 DEFA4P12838 97 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 NREPQ16612 68 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 SPINT4Q6UDR6 99 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 ZNF833PQ6ZTB9 187 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 ADM2Q7Z4H4 148 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 COX7B2Q8TF08 81 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 C20orf166-AS1Q96NR2 134 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 HIGD2AQ9BW72 106 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 PROK2Q9HC23 129 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 LINC00846Q9NV44 126 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 ZFC3H1O60293 1989 aaKnown RBP1.08□□□□□ -2.24
ITGB1-213ENST00000484088 LOC285556D6RIA3 1793 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 SIPA1L3O60292 1781 aaPredicted RBP1.08□□□□□ -2.24
ITGB1-213ENST00000484088 DSCAML1Q8TD84 2053 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 ATG2BQ96BY7 2078 aa1.08□□□□□ -2.24
ITGB1-213ENST00000484088 LTBP4Q8N2S1 1624 aa1.07□□□□□ -2.24
ITGB1-213ENST00000484088 TANC1Q9C0D5 1861 aa1.07□□□□□ -2.24
ITGB1-213ENST00000484088 MED12LQ86YW9 2145 aa1.07□□□□□ -2.24
ITGB1-213ENST00000484088 C3P01024 1663 aa1.07□□□□□ -2.24
ITGB1-213ENST00000484088 FBN1P35555 2871 aaKnown RBP1.07□□□□□ -2.24
ITGB1-213ENST00000484088 TJP1Q07157 1748 aa1.07□□□□□ -2.24
ITGB1-213ENST00000484088 EML6Q6ZMW3 1958 aa1.07□□□□□ -2.24
ITGB1-213ENST00000484088 MAST2Q6P0Q8 1798 aa1.07□□□□□ -2.24
ITGB1-213ENST00000484088 IGKV1D-37A0A075B6S9 117 aa1.07□□□□□ -2.24
ITGB1-213ENST00000484088 IGKV1OR2-108A0A075B7D4 117 aa1.07□□□□□ -2.24
ITGB1-213ENST00000484088 A0A087WVE0 104 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms