RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 INSP01308 110 aa5.9□□□□□ -1.46
SORT1-205ENST00000483508 RBMY1A1P0DJD3 496 aaKnown RBP5.9□□□□□ -1.46
SORT1-205ENST00000483508 RBMY1CP0DJD4 496 aa5.9□□□□□ -1.46
SORT1-205ENST00000483508 MRPS36P82909 103 aaKnown RBP5.9□□□□□ -1.46
SORT1-205ENST00000483508 RBMY1FQ15415 496 aaKnown RBP5.9□□□□□ -1.46
SORT1-205ENST00000483508 C9orf66Q5T8R8 295 aa5.9□□□□□ -1.46
SORT1-205ENST00000483508 C10orf126Q8N4M7 172 aa5.9□□□□□ -1.46
SORT1-205ENST00000483508 MAP6D1Q9H9H5 199 aa5.9□□□□□ -1.46
SORT1-205ENST00000483508 PRO1854Q9UHT4 67 aa5.9□□□□□ -1.46
SORT1-205ENST00000483508 NACAE9PAV3 2078 aa5.89□□□□□ -1.47
SORT1-205ENST00000483508 RBMY1BA6NDE4 496 aaKnown RBP5.89□□□□□ -1.47
SORT1-205ENST00000483508 RBMY1EA6NEQ0 496 aaKnown RBP5.89□□□□□ -1.47
SORT1-205ENST00000483508 CCL24O00175 119 aa5.89□□□□□ -1.47
SORT1-205ENST00000483508 APOMO95445 188 aa5.89□□□□□ -1.47
SORT1-205ENST00000483508 IGHV3-53P01767 116 aa5.89□□□□□ -1.47
SORT1-205ENST00000483508 RBMY1DP0C7P1 496 aaKnown RBP5.89□□□□□ -1.47
SORT1-205ENST00000483508 CFAP126Q5VTH2 177 aa5.89□□□□□ -1.47
SORT1-205ENST00000483508 C18orf65Q6ZTR6 163 aa5.89□□□□□ -1.47
SORT1-205ENST00000483508 TMEM61Q8N0U2 210 aa5.89□□□□□ -1.47
SORT1-205ENST00000483508 SPATA25Q9BR10 227 aa5.89□□□□□ -1.47
SORT1-205ENST00000483508 LOC107984156A0A0G2JMH3 177 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 A0A0J9YXV3 536 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 TINCRA0A1B0GVN0 87 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 M0QXV9 152 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 RS1O15537 224 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 CFC1BP0CG36 223 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 CFC1P0CG37 223 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 PSMB2P49721 201 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 DEFB114Q30KQ6 69 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 ETDBQ3ZM63 59 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 ARL17AQ8IVW1 177 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 C11orf72Q8NBR9 251 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 SIGMAR1Q99720 223 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 TIMM21Q9BVV7 248 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 C1QTNF4Q9BXJ3 329 aa5.88□□□□□ -1.47
SORT1-205ENST00000483508 IGHV1-58A0A0C4DH39 117 aa5.87□□□□□ -1.47
SORT1-205ENST00000483508 GAGE12HA6NDE8 117 aa5.87□□□□□ -1.47
SORT1-205ENST00000483508 CMC4P56277 68 aaPredicted RBP5.87□□□□□ -1.47
SORT1-205ENST00000483508 SMAGPQ0VAQ4 97 aa5.87□□□□□ -1.47
SORT1-205ENST00000483508 DEFB136Q30KP8 78 aa5.87□□□□□ -1.47
SORT1-205ENST00000483508 SBSPONQ8IVN8 264 aa5.87□□□□□ -1.47
SORT1-205ENST00000483508 LINC01587Q99440 93 aa5.87□□□□□ -1.47
SORT1-205ENST00000483508 OPRPNQ99935 248 aaPredicted RBP5.87□□□□□ -1.47
SORT1-205ENST00000483508 CHCHD7Q9BUK0 85 aa5.87□□□□□ -1.47
SORT1-205ENST00000483508 SPANXDQ9BXN6 97 aa5.87□□□□□ -1.47
SORT1-205ENST00000483508 SPANXCQ9NY87 97 aa5.87□□□□□ -1.47
SORT1-205ENST00000483508 UBE2D4Q9Y2X8 147 aa5.87□□□□□ -1.47
SORT1-205ENST00000483508 PRKDCP78527 4128 aaKnown RBP5.86□□□□□ -1.47
SORT1-205ENST00000483508 A0A0J9YXY3 114 aa5.86□□□□□ -1.47
SORT1-205ENST00000483508 A4D1N5 150 aa5.86□□□□□ -1.47
SORT1-205ENST00000483508 C3orf84H3BNL1 204 aa5.86□□□□□ -1.47
SORT1-205ENST00000483508 TIMM17BO60830 172 aa5.86□□□□□ -1.47
SORT1-205ENST00000483508 IGHV3-30-3P0DP02 117 aa5.86□□□□□ -1.47
SORT1-205ENST00000483508 TIRAPP58753 221 aa5.86□□□□□ -1.47
SORT1-205ENST00000483508 SH2D6Q7Z4S9 175 aa5.86□□□□□ -1.47
SORT1-205ENST00000483508 DEFB104AQ8WTQ1 72 aa5.86□□□□□ -1.47
SORT1-205ENST00000483508 TMEM263Q8WUH6 116 aaKnown RBP5.86□□□□□ -1.47
SORT1-205ENST00000483508 RNF183Q96D59 192 aa5.86□□□□□ -1.47
SORT1-205ENST00000483508 ERG28Q9UKR5 140 aa5.86□□□□□ -1.47
SORT1-205ENST00000483508 DNAH3Q8TD57 4116 aa5.86□□□□□ -1.47
SORT1-205ENST00000483508 IGHV3-73A0A0B4J1V6 119 aa5.85□□□□□ -1.47
SORT1-205ENST00000483508 TCL1BO95988 128 aa5.85□□□□□ -1.47
SORT1-205ENST00000483508 IGHV3-33P01772 117 aa5.85□□□□□ -1.47
SORT1-205ENST00000483508 HTN1P15515 57 aa5.85□□□□□ -1.47
SORT1-205ENST00000483508 SMCPP49901 116 aaPredicted RBP5.85□□□□□ -1.47
SORT1-205ENST00000483508 FOXI1Q12951 378 aa5.85□□□□□ -1.47
SORT1-205ENST00000483508 TEN1Q86WV5 123 aa5.85□□□□□ -1.47
SORT1-205ENST00000483508 MUSTN1Q8IVN3 82 aa5.85□□□□□ -1.47
SORT1-205ENST00000483508 IL17DQ8TAD2 202 aa5.85□□□□□ -1.47
SORT1-205ENST00000483508 PPDPFLQ8WWR9 84 aa5.85□□□□□ -1.47
SORT1-205ENST00000483508 FAM104AQ969W3 186 aa5.85□□□□□ -1.47
SORT1-205ENST00000483508 IGLV5-45A0A087WSX0 123 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 TRBV10-1A0A0K0K1A3 114 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 CIDEAO60543 219 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 SCGB1C2P0DMR2 95 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 IFITM1P13164 125 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 INSL3P51460 131 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 FHL3Q13643 280 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 ZFAND6Q6FIF0 208 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 FAM19A3Q7Z5A8 133 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 STHQ8IWL8 128 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 VSIG2Q96IQ7 327 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 LINC01600Q96MT4 127 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 GEMIN7Q9H840 131 aaKnown RBP5.84□□□□□ -1.47
SORT1-205ENST00000483508 NDUFA12Q9UI09 145 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 SORL1Q92673 2214 aa5.84□□□□□ -1.47
SORT1-205ENST00000483508 IGHV3-64A0A075B6Q5 118 aa5.83□□□□□ -1.48
SORT1-205ENST00000483508 TRBV30A0A0K0K1B3 111 aa5.83□□□□□ -1.48
SORT1-205ENST00000483508 LCE2BO14633 110 aa5.83□□□□□ -1.48
SORT1-205ENST00000483508 ATXN8Q156A1 80 aa5.83□□□□□ -1.48
SORT1-205ENST00000483508 MIAQ16674 131 aa5.83□□□□□ -1.48
SORT1-205ENST00000483508 ODF3L2Q3SX64 289 aa5.83□□□□□ -1.48
SORT1-205ENST00000483508 Q6ZSN1 163 aa5.83□□□□□ -1.48
SORT1-205ENST00000483508 Q6ZUT4 128 aa5.83□□□□□ -1.48
SORT1-205ENST00000483508 MUC7Q8TAX7 377 aa5.83□□□□□ -1.48
SORT1-205ENST00000483508 LITAFQ99732 161 aa5.83□□□□□ -1.48
SORT1-205ENST00000483508 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.82□□□□□ -1.48
SORT1-205ENST00000483508 TRAV4A0A0B4J268 109 aa5.82□□□□□ -1.48
SORT1-205ENST00000483508 IGKV2-29A2NJV5 120 aaPredicted RBP5.82□□□□□ -1.48
SORT1-205ENST00000483508 NDUFA1O15239 70 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms