RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 PPDPFQ9H3Y8 114 aa13.1□□□□□ -0.31
SSR4-209ENST00000482902 RNASE13Q5GAN3 156 aaKnown RBP13.09□□□□□ -0.31
SSR4-209ENST00000482902 YAE1D1Q9NRH1 226 aa13.09□□□□□ -0.31
SSR4-209ENST00000482902 ZANQ9Y493 2812 aa13.09□□□□□ -0.31
SSR4-209ENST00000482902 A8MTW9 85 aa13.09□□□□□ -0.31
SSR4-209ENST00000482902 SMCR5Q8TEV8 140 aa13.09□□□□□ -0.31
SSR4-209ENST00000482902 ACYP1P07311 99 aa13.08□□□□□ -0.32
SSR4-209ENST00000482902 POLQO75417 2590 aa13.07□□□□□ -0.32
SSR4-209ENST00000482902 MYO18BQ8IUG5 2567 aa13.07□□□□□ -0.32
SSR4-209ENST00000482902 ANKRD17O75179 2603 aaKnown RBP13.07□□□□□ -0.32
SSR4-209ENST00000482902 CITED2Q99967 270 aaPredicted RBP13.07□□□□□ -0.32
SSR4-209ENST00000482902 Q9UF83 564 aa13.07□□□□□ -0.32
SSR4-209ENST00000482902 CACNA1AO00555 2505 aa13.07□□□□□ -0.32
SSR4-209ENST00000482902 TINCRA0A1B0GVN0 87 aa13.07□□□□□ -0.32
SSR4-209ENST00000482902 TIMM17BO60830 172 aa13.07□□□□□ -0.32
SSR4-209ENST00000482902 ZNF415Q09FC8 603 aa13.07□□□□□ -0.32
SSR4-209ENST00000482902 Q6ZSN1 163 aa13.07□□□□□ -0.32
SSR4-209ENST00000482902 DAND5Q8N907 189 aa13.07□□□□□ -0.32
SSR4-209ENST00000482902 FBN2P35556 2912 aa13.06□□□□□ -0.32
SSR4-209ENST00000482902 PEMTQ9UBM1 199 aa13.06□□□□□ -0.32
SSR4-209ENST00000482902 KHDC1LQ5JSQ8 128 aa13.05□□□□□ -0.32
SSR4-209ENST00000482902 ACACBO00763 2458 aa13.05□□□□□ -0.32
SSR4-209ENST00000482902 PRB1P04280 392 aa13.04□□□□□ -0.32
SSR4-209ENST00000482902 Q8N2B8 174 aa13.04□□□□□ -0.32
SSR4-209ENST00000482902 C3orf22Q8N5N4 141 aa13.04□□□□□ -0.32
SSR4-209ENST00000482902 MAP6D1Q9H9H5 199 aa13.04□□□□□ -0.32
SSR4-209ENST00000482902 C9orf153Q5TBE3 101 aa13.03□□□□□ -0.32
SSR4-209ENST00000482902 LINC00643Q86TS7 51 aa13.03□□□□□ -0.32
SSR4-209ENST00000482902 DYNLRB2Q8TF09 96 aa13.03□□□□□ -0.32
SSR4-209ENST00000482902 PIK3CD-AS1Q5SR53 167 aa13.03□□□□□ -0.32
SSR4-209ENST00000482902 C4orf3Q8WVX3 66 aa13.03□□□□□ -0.32
SSR4-209ENST00000482902 CHCHD7Q9BUK0 85 aa13.03□□□□□ -0.32
SSR4-209ENST00000482902 NDUFA7O95182 113 aa13.02□□□□□ -0.32
SSR4-209ENST00000482902 LINC00694P0DN24 101 aa13.02□□□□□ -0.32
SSR4-209ENST00000482902 KRTAP10-9P60411 292 aa13.02□□□□□ -0.32
SSR4-209ENST00000482902 HIST2H2BDQ6DRA6 164 aa13.02□□□□□ -0.32
SSR4-209ENST00000482902 SDIM1Q6ZPB5 146 aa13.02□□□□□ -0.32
SSR4-209ENST00000482902 MXRA5Q9NR99 2828 aa13.01□□□□□ -0.33
SSR4-209ENST00000482902 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.01□□□□□ -0.33
SSR4-209ENST00000482902 IGKV2-29A2NJV5 120 aaPredicted RBP13.01□□□□□ -0.33
SSR4-209ENST00000482902 COX7A2LO14548 114 aa13.01□□□□□ -0.33
SSR4-209ENST00000482902 C11orf72Q8NBR9 251 aa13.01□□□□□ -0.33
SSR4-209ENST00000482902 DNAJC30Q96LL9 226 aa13.01□□□□□ -0.33
SSR4-209ENST00000482902 UBE2D4Q9Y2X8 147 aa13.01□□□□□ -0.33
SSR4-209ENST00000482902 FAM208BQ5VWN6 2430 aa13.01□□□□□ -0.33
SSR4-209ENST00000482902 NDUFA1O15239 70 aa13.01□□□□□ -0.33
SSR4-209ENST00000482902 IGHV3-38A0A0C4DH36 116 aa13□□□□□ -0.33
SSR4-209ENST00000482902 UQCRQO14949 82 aa13□□□□□ -0.33
SSR4-209ENST00000482902 DEFB114Q30KQ6 69 aa13□□□□□ -0.33
SSR4-209ENST00000482902 LINC00526Q96FQ7 95 aa12.99□□□□□ -0.33
SSR4-209ENST00000482902 LINC00467Q9BRT7 94 aa12.99□□□□□ -0.33
SSR4-209ENST00000482902 INSP01308 110 aa12.99□□□□□ -0.33
SSR4-209ENST00000482902 LINC00308Q8TCZ7 52 aa12.99□□□□□ -0.33
SSR4-209ENST00000482902 IGHV3-53P01767 116 aa12.98□□□□□ -0.33
SSR4-209ENST00000482902 BEAN1Q3B7T3 259 aa12.98□□□□□ -0.33
SSR4-209ENST00000482902 CDKN2A-AS1Q9UH64 79 aa12.98□□□□□ -0.33
SSR4-209ENST00000482902 CR1P17927 2039 aa12.98□□□□□ -0.33
SSR4-209ENST00000482902 DAZ2Q13117 558 aaKnown RBP12.98□□□□□ -0.33
SSR4-209ENST00000482902 DEFB113Q30KQ7 82 aa12.98□□□□□ -0.33
SSR4-209ENST00000482902 DAZ4Q86SG3 579 aaKnown RBP12.98□□□□□ -0.33
SSR4-209ENST00000482902 DAZ3Q9NR90 486 aaKnown RBP12.98□□□□□ -0.33
SSR4-209ENST00000482902 C22orf24Q9Y442 160 aa12.98□□□□□ -0.33
SSR4-209ENST00000482902 NACAE9PAV3 2078 aa12.97□□□□□ -0.33
SSR4-209ENST00000482902 ATP5G1P05496 136 aa12.97□□□□□ -0.33
SSR4-209ENST00000482902 C5orf38Q86SI9 138 aa12.97□□□□□ -0.33
SSR4-209ENST00000482902 HERVK_113P63121 156 aa12.97□□□□□ -0.33
SSR4-209ENST00000482902 RS1O15537 224 aa12.96□□□□□ -0.33
SSR4-209ENST00000482902 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.96□□□□□ -0.33
SSR4-209ENST00000482902 Q96MF0 132 aa12.96□□□□□ -0.33
SSR4-209ENST00000482902 CENPEQ02224 2701 aa12.96□□□□□ -0.34
SSR4-209ENST00000482902 IGLV5-45A0A087WSX0 123 aa12.96□□□□□ -0.34
SSR4-209ENST00000482902 XCL2Q9UBD3 114 aa12.96□□□□□ -0.34
SSR4-209ENST00000482902 KLK5Q9Y337 293 aaPredicted RBP12.96□□□□□ -0.34
SSR4-209ENST00000482902 CSDC2Q9Y534 153 aaKnown RBP12.96□□□□□ -0.34
SSR4-209ENST00000482902 PTPN13Q12923 2485 aa12.95□□□□□ -0.34
SSR4-209ENST00000482902 ZNF462Q96JM2 2506 aa12.95□□□□□ -0.34
SSR4-209ENST00000482902 CXCL5P42830 114 aa12.94□□□□□ -0.34
SSR4-209ENST00000482902 SOSTDC1Q6X4U4 206 aa12.94□□□□□ -0.34
SSR4-209ENST00000482902 LOC107984640A0A0U1RRK4 108 aa12.94□□□□□ -0.34
SSR4-209ENST00000482902 TRACP01848 142 aa12.94□□□□□ -0.34
SSR4-209ENST00000482902 CIRBPQ14011 172 aaKnown RBP12.94□□□□□ -0.34
SSR4-209ENST00000482902 LRRK2Q5S007 2527 aa12.94□□□□□ -0.34
SSR4-209ENST00000482902 BBC3Q96PG8 261 aaPredicted RBP12.93□□□□□ -0.34
SSR4-209ENST00000482902 NAV2Q8IVL1 2488 aa12.93□□□□□ -0.34
SSR4-209ENST00000482902 BAALC-AS2P0C853 105 aa12.93□□□□□ -0.34
SSR4-209ENST00000482902 Q9H8V8 135 aa12.93□□□□□ -0.34
SSR4-209ENST00000482902 IGHV3OR16-12A0A075B7B8 117 aa12.92□□□□□ -0.34
SSR4-209ENST00000482902 TIRAPP58753 221 aa12.92□□□□□ -0.34
SSR4-209ENST00000482902 ODF3L2Q3SX64 289 aa12.92□□□□□ -0.34
SSR4-209ENST00000482902 C2orf48Q96LS8 159 aa12.92□□□□□ -0.34
SSR4-209ENST00000482902 COX7CP15954 63 aa12.92□□□□□ -0.34
SSR4-209ENST00000482902 ZFYVE26Q68DK2 2539 aa12.92□□□□□ -0.34
SSR4-209ENST00000482902 IGLV5-39A0A0G2JS06 123 aa12.91□□□□□ -0.34
SSR4-209ENST00000482902 LRRC75A-AS1Q8N1F1 130 aa12.91□□□□□ -0.34
SSR4-209ENST00000482902 FAM218AQ96MZ4 157 aa12.91□□□□□ -0.34
SSR4-209ENST00000482902 MYO9AB2RTY4 2548 aa12.91□□□□□ -0.34
SSR4-209ENST00000482902 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
SSR4-209ENST00000482902 HIST1H4AP62805 103 aaKnown RBP12.91□□□□□ -0.34
SSR4-209ENST00000482902 COX6A2Q02221 97 aa12.91□□□□□ -0.34
SSR4-209ENST00000482902 STHQ8IWL8 128 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms