RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 TOMM6Q96B49 74 aa10.33□□□□□ -0.76
CCM2-215ENST00000482714 RMI2Q96E14 147 aa10.33□□□□□ -0.76
CCM2-215ENST00000482714 URB1-AS1Q96HZ7 61 aa10.33□□□□□ -0.76
CCM2-215ENST00000482714 KRTAP1-5Q9BYS1 174 aa10.33□□□□□ -0.76
CCM2-215ENST00000482714 C1orf196B1AJZ1 125 aa10.32□□□□□ -0.76
CCM2-215ENST00000482714 CRPP02741 224 aa10.32□□□□□ -0.76
CCM2-215ENST00000482714 RPL39P62891 51 aaKnown RBP10.32□□□□□ -0.76
CCM2-215ENST00000482714 PAPPA-AS1Q5QFB9 102 aa10.32□□□□□ -0.76
CCM2-215ENST00000482714 LINC00269Q8N2A0 174 aa10.32□□□□□ -0.76
CCM2-215ENST00000482714 Q8N3U1 123 aa10.32□□□□□ -0.76
CCM2-215ENST00000482714 TM2D2Q9BX73 214 aa10.32□□□□□ -0.76
CCM2-215ENST00000482714 HIST1H2BKO60814 126 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 HIST1H2BJP06899 126 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 HIST1H2BOP23527 126 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 HIST1H2BBP33778 126 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 HIST1H2BDP58876 126 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 HIST1H2BCP62807 126 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 REG3AQ06141 175 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 HIST2H2BEQ16778 126 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.31□□□□□ -0.76
CCM2-215ENST00000482714 ENHOQ6UWT2 76 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 ERASQ7Z444 233 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 HIST1H2BHQ93079 126 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 UBE2WQ96B02 151 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 TIMM17AQ99595 171 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 HIST1H2BNQ99877 126 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 HIST1H2BMQ99879 126 aa10.31□□□□□ -0.76
CCM2-215ENST00000482714 IGIPA6NJ69 53 aa10.3□□□□□ -0.76
CCM2-215ENST00000482714 TMEM141Q96I45 108 aa10.3□□□□□ -0.76
CCM2-215ENST00000482714 HBDP02042 147 aa10.3□□□□□ -0.76
CCM2-215ENST00000482714 EPPK1P58107 5090 aaKnown RBP10.29□□□□□ -0.76
CCM2-215ENST00000482714 HSBP1O75506 76 aa10.29□□□□□ -0.76
CCM2-215ENST00000482714 DNAH2Q9P225 4427 aa10.28□□□□□ -0.76
CCM2-215ENST00000482714 Q6ZN92 141 aa10.28□□□□□ -0.76
CCM2-215ENST00000482714 SCGB3A1Q96QR1 104 aa10.28□□□□□ -0.76
CCM2-215ENST00000482714 COA6Q5JTJ3 125 aaKnown RBP10.27□□□□□ -0.77
CCM2-215ENST00000482714 LINC00336Q6ZUF6 198 aa10.27□□□□□ -0.77
CCM2-215ENST00000482714 C1orf43Q9BWL3 253 aa10.27□□□□□ -0.77
CCM2-215ENST00000482714 VCX2Q9H322 139 aa10.27□□□□□ -0.77
CCM2-215ENST00000482714 IGLV4-3A0A075B6K6 122 aa10.26□□□□□ -0.77
CCM2-215ENST00000482714 ATP5LO75964 103 aa10.26□□□□□ -0.77
CCM2-215ENST00000482714 SS18Q15532 418 aa10.26□□□□□ -0.77
CCM2-215ENST00000482714 Q6ZRN7 208 aaPredicted RBP10.26□□□□□ -0.77
CCM2-215ENST00000482714 FAM104AQ969W3 186 aa10.26□□□□□ -0.77
CCM2-215ENST00000482714 Q9HAA7 133 aa10.26□□□□□ -0.77
CCM2-215ENST00000482714 IGKV2D-24A0A075B6R9 120 aa10.25□□□□□ -0.77
CCM2-215ENST00000482714 A0A096LNJ9 63 aa10.25□□□□□ -0.77
CCM2-215ENST00000482714 LINC00959A0A1B0GUT2 108 aa10.25□□□□□ -0.77
CCM2-215ENST00000482714 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.25□□□□□ -0.77
CCM2-215ENST00000482714 SERF1AO75920 110 aa10.25□□□□□ -0.77
CCM2-215ENST00000482714 PDZD11Q5EBL8 140 aa10.25□□□□□ -0.77
CCM2-215ENST00000482714 TEX43Q6ZNM6 134 aa10.25□□□□□ -0.77
CCM2-215ENST00000482714 AMELXQ99217 191 aa10.25□□□□□ -0.77
CCM2-215ENST00000482714 Q6ZUT4 128 aa10.24□□□□□ -0.77
CCM2-215ENST00000482714 DNAH10Q8IVF4 4471 aa10.24□□□□□ -0.77
CCM2-215ENST00000482714 PSCAO43653 123 aa10.23□□□□□ -0.77
CCM2-215ENST00000482714 C2orf88Q9BSF0 95 aa10.23□□□□□ -0.77
CCM2-215ENST00000482714 DNAH17Q9UFH2 4485 aa10.23□□□□□ -0.77
CCM2-215ENST00000482714 RTL8CO15255 209 aa10.23□□□□□ -0.77
CCM2-215ENST00000482714 LINC00310P59036 64 aa10.23□□□□□ -0.77
CCM2-215ENST00000482714 OPRPNQ99935 248 aaPredicted RBP10.23□□□□□ -0.77
CCM2-215ENST00000482714 SEC11AP67812 179 aa10.22□□□□□ -0.77
CCM2-215ENST00000482714 KRTAP26-1Q6PEX3 210 aa10.22□□□□□ -0.77
CCM2-215ENST00000482714 CLPSL2Q6UWE3 100 aa10.22□□□□□ -0.77
CCM2-215ENST00000482714 PACRGQ96M98 296 aaPredicted RBP10.22□□□□□ -0.77
CCM2-215ENST00000482714 IGKV3OR2-268A0A0C4DH90 116 aa10.21□□□□□ -0.78
CCM2-215ENST00000482714 NUPR1O60356 82 aa10.21□□□□□ -0.78
CCM2-215ENST00000482714 NDUFA6P56556 154 aa10.21□□□□□ -0.78
CCM2-215ENST00000482714 PMCHL1Q16048 86 aa10.21□□□□□ -0.78
CCM2-215ENST00000482714 CD164L2Q6UWJ8 174 aa10.21□□□□□ -0.78
CCM2-215ENST00000482714 FAM19A3Q7Z5A8 133 aa10.21□□□□□ -0.78
CCM2-215ENST00000482714 CHCHD10Q8WYQ3 142 aaPredicted RBP10.21□□□□□ -0.78
CCM2-215ENST00000482714 BIRC6Q9NR09 4857 aa10.2□□□□□ -0.78
CCM2-215ENST00000482714 TRAV13-1A0A0B4J241 112 aa10.2□□□□□ -0.78
CCM2-215ENST00000482714 IFITM10A6NMD0 228 aa10.2□□□□□ -0.78
CCM2-215ENST00000482714 LEPROTL1O95214 131 aa10.2□□□□□ -0.78
CCM2-215ENST00000482714 PMVKQ15126 192 aa10.2□□□□□ -0.78
CCM2-215ENST00000482714 FAM19A2Q8N3H0 131 aa10.2□□□□□ -0.78
CCM2-215ENST00000482714 HSPB8Q9UJY1 196 aa10.2□□□□□ -0.78
CCM2-215ENST00000482714 FRAS1Q86XX4 4008 aa10.19□□□□□ -0.78
CCM2-215ENST00000482714 IGLV10-54A0A075B6I4 117 aa10.19□□□□□ -0.78
CCM2-215ENST00000482714 RNASE13Q5GAN3 156 aaKnown RBP10.19□□□□□ -0.78
CCM2-215ENST00000482714 UBE2D1P51668 147 aa10.18□□□□□ -0.78
CCM2-215ENST00000482714 LINC00173Q6ZV60 143 aa10.18□□□□□ -0.78
CCM2-215ENST00000482714 BAALCQ8WXS3 180 aa10.18□□□□□ -0.78
CCM2-215ENST00000482714 IFI27L1Q96BM0 104 aa10.18□□□□□ -0.78
CCM2-215ENST00000482714 CST9LQ9H4G1 147 aa10.18□□□□□ -0.78
CCM2-215ENST00000482714 EREGO14944 169 aa10.17□□□□□ -0.78
CCM2-215ENST00000482714 S100A6P06703 90 aa10.17□□□□□ -0.78
CCM2-215ENST00000482714 PRSS1P07477 247 aa10.17□□□□□ -0.78
CCM2-215ENST00000482714 CFAP161Q6P656 301 aa10.17□□□□□ -0.78
CCM2-215ENST00000482714 LRCOL1A6NCL2 159 aa10.17□□□□□ -0.78
CCM2-215ENST00000482714 GAGE12HA6NDE8 117 aa10.17□□□□□ -0.78
CCM2-215ENST00000482714 PRSS29PA6NIE9 313 aa10.17□□□□□ -0.78
CCM2-215ENST00000482714 LINC00242Q5T6M2 205 aa10.17□□□□□ -0.78
CCM2-215ENST00000482714 MAPKAPK5-AS1Q8N8E1 139 aa10.17□□□□□ -0.78
CCM2-215ENST00000482714 TRAV12-1A0A0B4J245 112 aa10.16□□□□□ -0.78
CCM2-215ENST00000482714 IGHV3OR16-9A0A0B4J2B5 98 aa10.16□□□□□ -0.78
CCM2-215ENST00000482714 XCL1P47992 114 aa10.16□□□□□ -0.78
CCM2-215ENST00000482714 HERVK_113P63121 156 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 524.1 ms