RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ZNF292O60281 2723 aa13.93□□□□□ -0.18
CCM2-214ENST00000481194 KPRPQ5T749 579 aaPredicted RBP13.93□□□□□ -0.18
CCM2-214ENST00000481194 LINC00269Q8N2A0 174 aa13.93□□□□□ -0.18
CCM2-214ENST00000481194 EPG5Q9HCE0 2579 aa13.92□□□□□ -0.18
CCM2-214ENST00000481194 ANKRD17O75179 2603 aaKnown RBP13.92□□□□□ -0.18
CCM2-214ENST00000481194 A0A0J9YWU9 116 aa13.91□□□□□ -0.18
CCM2-214ENST00000481194 INAFM2P0DMQ5 153 aa13.91□□□□□ -0.18
CCM2-214ENST00000481194 ZFYVE26Q68DK2 2539 aa13.91□□□□□ -0.18
CCM2-214ENST00000481194 C12orf74Q32Q52 190 aa13.9□□□□□ -0.18
CCM2-214ENST00000481194 OCIAD2Q56VL3 154 aa13.9□□□□□ -0.18
CCM2-214ENST00000481194 HIST1H4AP62805 103 aaKnown RBP13.9□□□□□ -0.18
CCM2-214ENST00000481194 CHCHD10Q8WYQ3 142 aaPredicted RBP13.9□□□□□ -0.18
CCM2-214ENST00000481194 EDA2RQ9HAV5 297 aa13.9□□□□□ -0.18
CCM2-214ENST00000481194 UBE2D4Q9Y2X8 147 aa13.89□□□□□ -0.19
CCM2-214ENST00000481194 CHCHD7Q9BUK0 85 aa13.89□□□□□ -0.19
CCM2-214ENST00000481194 CDPF1Q6NVV7 123 aa13.89□□□□□ -0.19
CCM2-214ENST00000481194 LURAP1LQ8IV03 231 aa13.89□□□□□ -0.19
CCM2-214ENST00000481194 SONP18583 2426 aaKnown RBP13.89□□□□□ -0.19
CCM2-214ENST00000481194 PRM2P04554 102 aa13.89□□□□□ -0.19
CCM2-214ENST00000481194 MIAQ16674 131 aa13.88□□□□□ -0.19
CCM2-214ENST00000481194 TMEM223A0PJW6 202 aa13.88□□□□□ -0.19
CCM2-214ENST00000481194 CDK2AP2O75956 126 aa13.88□□□□□ -0.19
CCM2-214ENST00000481194 ZNF22P17026 224 aaPredicted RBP13.87□□□□□ -0.19
CCM2-214ENST00000481194 WNK1Q9H4A3 2382 aa13.87□□□□□ -0.19
CCM2-214ENST00000481194 RPL18AQ02543 176 aaKnown RBP13.87□□□□□ -0.19
CCM2-214ENST00000481194 GAGE2AQ6NT46 116 aa13.87□□□□□ -0.19
CCM2-214ENST00000481194 F8W1H4 67 aa13.86□□□□□ -0.19
CCM2-214ENST00000481194 CFC1BP0CG36 223 aa13.86□□□□□ -0.19
CCM2-214ENST00000481194 CFC1P0CG37 223 aa13.86□□□□□ -0.19
CCM2-214ENST00000481194 RBX1P62877 108 aa13.86□□□□□ -0.19
CCM2-214ENST00000481194 SND1-IT1Q9HBX3 110 aa13.86□□□□□ -0.19
CCM2-214ENST00000481194 FHL2Q14192 279 aa13.86□□□□□ -0.19
CCM2-214ENST00000481194 KRTAP1-1Q07627 177 aa13.85□□□□□ -0.19
CCM2-214ENST00000481194 NFE4Q86UQ8 179 aa13.85□□□□□ -0.19
CCM2-214ENST00000481194 MUSTN1Q8IVN3 82 aa13.85□□□□□ -0.19
CCM2-214ENST00000481194 USP9XQ93008 2570 aaPredicted RBP13.85□□□□□ -0.19
CCM2-214ENST00000481194 NUPR2A6NF83 97 aa13.85□□□□□ -0.19
CCM2-214ENST00000481194 NHLRC4P0CG21 123 aaPredicted RBP13.85□□□□□ -0.19
CCM2-214ENST00000481194 LOC100131303A0A0U1RQF7 123 aa13.84□□□□□ -0.19
CCM2-214ENST00000481194 K7EP34 96 aa13.84□□□□□ -0.19
CCM2-214ENST00000481194 PPDPFLQ8WWR9 84 aa13.84□□□□□ -0.19
CCM2-214ENST00000481194 NANOS2P60321 138 aaKnown RBP13.84□□□□□ -0.19
CCM2-214ENST00000481194 SPANXDQ9BXN6 97 aa13.83□□□□□ -0.19
CCM2-214ENST00000481194 C11orf72Q8NBR9 251 aa13.83□□□□□ -0.2
CCM2-214ENST00000481194 A0A1W2PPM0 123 aa13.83□□□□□ -0.2
CCM2-214ENST00000481194 UFSP1Q6NVU6 142 aa13.83□□□□□ -0.2
CCM2-214ENST00000481194 WFDC9Q8NEX5 89 aa13.83□□□□□ -0.2
CCM2-214ENST00000481194 USP9YO00507 2555 aaPredicted RBP13.82□□□□□ -0.2
CCM2-214ENST00000481194 CD164L2Q6UWJ8 174 aa13.82□□□□□ -0.2
CCM2-214ENST00000481194 CDKN2A-AS1Q9UH64 79 aa13.82□□□□□ -0.2
CCM2-214ENST00000481194 GAS8-AS1O95177 125 aa13.81□□□□□ -0.2
CCM2-214ENST00000481194 RETNQ9HD89 108 aa13.81□□□□□ -0.2
CCM2-214ENST00000481194 PRB2P02812 416 aaPredicted RBP13.8□□□□□ -0.2
CCM2-214ENST00000481194 A0A0J9YXY3 114 aa13.8□□□□□ -0.2
CCM2-214ENST00000481194 H0YGX0 51 aa13.8□□□□□ -0.2
CCM2-214ENST00000481194 TNRC18O15417 2968 aaPredicted RBP13.79□□□□□ -0.2
CCM2-214ENST00000481194 A4D1N5 150 aa13.79□□□□□ -0.2
CCM2-214ENST00000481194 IGIPA6NJ69 53 aa13.79□□□□□ -0.2
CCM2-214ENST00000481194 CSDC2Q9Y534 153 aaKnown RBP13.79□□□□□ -0.2
CCM2-214ENST00000481194 H3BQ85 93 aa13.79□□□□□ -0.2
CCM2-214ENST00000481194 UBE2BP63146 152 aa13.79□□□□□ -0.2
CCM2-214ENST00000481194 UBE2D1P51668 147 aa13.78□□□□□ -0.2
CCM2-214ENST00000481194 K7ERJ3 54 aa13.78□□□□□ -0.2
CCM2-214ENST00000481194 RBMY1FQ15415 496 aaKnown RBP13.78□□□□□ -0.2
CCM2-214ENST00000481194 CDC42SE2Q9NRR3 84 aa13.78□□□□□ -0.2
CCM2-214ENST00000481194 G3V4G9 280 aa13.78□□□□□ -0.2
CCM2-214ENST00000481194 IBA57-AS1B1ANH7 110 aa13.78□□□□□ -0.2
CCM2-214ENST00000481194 SPANXB1Q9NS25 103 aaPredicted RBP13.78□□□□□ -0.2
CCM2-214ENST00000481194 KIF25-AS1Q9Y6Z4 181 aa13.78□□□□□ -0.2
CCM2-214ENST00000481194 LINC00959A0A1B0GUT2 108 aa13.77□□□□□ -0.2
CCM2-214ENST00000481194 MIR7-3HGQ8N6C7 128 aa13.77□□□□□ -0.21
CCM2-214ENST00000481194 ABCA12Q86UK0 2595 aa13.76□□□□□ -0.21
CCM2-214ENST00000481194 K7EP13 123 aa13.76□□□□□ -0.21
CCM2-214ENST00000481194 Q8N976 141 aa13.76□□□□□ -0.21
CCM2-214ENST00000481194 TIMM17BO60830 172 aa13.76□□□□□ -0.21
CCM2-214ENST00000481194 URB1-AS1Q96HZ7 61 aa13.76□□□□□ -0.21
CCM2-214ENST00000481194 TTTY13Q9BZ97 58 aa13.75□□□□□ -0.21
CCM2-214ENST00000481194 POM121L12Q8N7R1 296 aa13.74□□□□□ -0.21
CCM2-214ENST00000481194 UBL5Q9BZL1 73 aa13.74□□□□□ -0.21
CCM2-214ENST00000481194 MYO9AB2RTY4 2548 aa13.74□□□□□ -0.21
CCM2-214ENST00000481194 IGLV2-18A0A075B6J9 118 aa13.74□□□□□ -0.21
CCM2-214ENST00000481194 A8MTW9 85 aa13.74□□□□□ -0.21
CCM2-214ENST00000481194 MUC7Q8TAX7 377 aa13.74□□□□□ -0.21
CCM2-214ENST00000481194 LINC00310P59036 64 aa13.73□□□□□ -0.21
CCM2-214ENST00000481194 ETDBQ3ZM63 59 aa13.73□□□□□ -0.21
CCM2-214ENST00000481194 TMEM126AQ9H061 195 aa13.73□□□□□ -0.21
CCM2-214ENST00000481194 LINC01546A6NGU7 62 aa13.73□□□□□ -0.21
CCM2-214ENST00000481194 Q6ZTC4 211 aa13.72□□□□□ -0.21
CCM2-214ENST00000481194 ETDCA0A1B0GVM5 59 aa13.72□□□□□ -0.21
CCM2-214ENST00000481194 ABCA2Q9BZC7 2435 aa13.72□□□□□ -0.21
CCM2-214ENST00000481194 FXYD2P54710 66 aa13.72□□□□□ -0.21
CCM2-214ENST00000481194 CARD19Q96LW7 228 aa13.71□□□□□ -0.21
CCM2-214ENST00000481194 SPANXCQ9NY87 97 aa13.71□□□□□ -0.21
CCM2-214ENST00000481194 HIGD2BQ4VC39 106 aa13.71□□□□□ -0.21
CCM2-214ENST00000481194 A0A0B4J2C4 111 aa13.71□□□□□ -0.22
CCM2-214ENST00000481194 A0A1B0GUV1 79 aa13.69□□□□□ -0.22
CCM2-214ENST00000481194 DAND5Q8N907 189 aa13.69□□□□□ -0.22
CCM2-214ENST00000481194 Q6ZSN1 163 aa13.69□□□□□ -0.22
CCM2-214ENST00000481194 DSCR8Q96T75 97 aa13.68□□□□□ -0.22
CCM2-214ENST00000481194 ORMDL1Q9P0S3 153 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms