RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 OR5A1Q8NGJ0 315 aa5.69□□□□□ -1.5
GTF3C2-210ENST00000480989 RNASE7Q9H1E1 156 aaKnown RBP5.69□□□□□ -1.5
GTF3C2-210ENST00000480989 CBY1Q9Y3M2 126 aa5.69□□□□□ -1.5
GTF3C2-210ENST00000480989 SDHAF1A6NFY7 115 aa5.68□□□□□ -1.5
GTF3C2-210ENST00000480989 TSHBP01222 138 aa5.68□□□□□ -1.5
GTF3C2-210ENST00000480989 GNG4P50150 75 aa5.68□□□□□ -1.5
GTF3C2-210ENST00000480989 PTTG1IPP53801 180 aa5.68□□□□□ -1.5
GTF3C2-210ENST00000480989 REG3GQ6UW15 175 aa5.68□□□□□ -1.5
GTF3C2-210ENST00000480989 Q6ZRP5 223 aa5.68□□□□□ -1.5
GTF3C2-210ENST00000480989 KRTAP11-1Q8IUC1 163 aa5.68□□□□□ -1.5
GTF3C2-210ENST00000480989 SMIM12Q96EX1 92 aa5.68□□□□□ -1.5
GTF3C2-210ENST00000480989 CARD19Q96LW7 228 aa5.68□□□□□ -1.5
GTF3C2-210ENST00000480989 NCR2O95944 276 aa5.67□□□□□ -1.5
GTF3C2-210ENST00000480989 APCSP02743 223 aa5.67□□□□□ -1.5
GTF3C2-210ENST00000480989 MEF2BQ02080 365 aaPredicted RBP5.67□□□□□ -1.5
GTF3C2-210ENST00000480989 TWIST1Q15672 202 aa5.67□□□□□ -1.5
GTF3C2-210ENST00000480989 AMMECR1LQ6DCA0 310 aa5.67□□□□□ -1.5
GTF3C2-210ENST00000480989 IGHV1-58A0A0C4DH39 117 aa5.66□□□□□ -1.5
GTF3C2-210ENST00000480989 H7C423 109 aa5.66□□□□□ -1.5
GTF3C2-210ENST00000480989 BCL2P10415 239 aa5.66□□□□□ -1.5
GTF3C2-210ENST00000480989 EIF5AP63241 154 aaKnown RBP5.66□□□□□ -1.5
GTF3C2-210ENST00000480989 SYCNQ0VAF6 134 aa5.66□□□□□ -1.5
GTF3C2-210ENST00000480989 OCC1Q8TAD7 63 aa5.66□□□□□ -1.5
GTF3C2-210ENST00000480989 RPP21Q9H633 154 aaKnown RBP5.66□□□□□ -1.5
GTF3C2-210ENST00000480989 CDC42SE2Q9NRR3 84 aa5.66□□□□□ -1.5
GTF3C2-210ENST00000480989 MED9Q9NWA0 146 aa5.66□□□□□ -1.5
GTF3C2-210ENST00000480989 TMEM242Q9NWH2 141 aa5.66□□□□□ -1.5
GTF3C2-210ENST00000480989 PSORS1C2Q9UIG4 136 aa5.66□□□□□ -1.5
GTF3C2-210ENST00000480989 IGLV4-69A0A075B6H9 119 aa5.65□□□□□ -1.5
GTF3C2-210ENST00000480989 TRBV6-5A0A0K0K1A5 114 aa5.65□□□□□ -1.5
GTF3C2-210ENST00000480989 KANTRA0A1W2PQU2 76 aa5.65□□□□□ -1.5
GTF3C2-210ENST00000480989 XKRY2A2RUG3 117 aa5.65□□□□□ -1.5
GTF3C2-210ENST00000480989 HSBP1L1C9JCN9 74 aa5.65□□□□□ -1.5
GTF3C2-210ENST00000480989 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.65□□□□□ -1.5
GTF3C2-210ENST00000480989 ZNF25P17030 456 aaPredicted RBP5.65□□□□□ -1.5
GTF3C2-210ENST00000480989 GAGE2BQ13066 116 aa5.65□□□□□ -1.5
GTF3C2-210ENST00000480989 PHF5AQ7RTV0 110 aaKnown RBP5.65□□□□□ -1.5
GTF3C2-210ENST00000480989 NUP35Q8NFH5 326 aa5.65□□□□□ -1.5
GTF3C2-210ENST00000480989 LINC00474Q9P2X8 69 aa5.65□□□□□ -1.5
GTF3C2-210ENST00000480989 PDE6DO43924 150 aa5.64□□□□□ -1.51
GTF3C2-210ENST00000480989 CAMPP49913 170 aa5.64□□□□□ -1.51
GTF3C2-210ENST00000480989 POLR2KP53803 58 aaKnown RBP5.64□□□□□ -1.51
GTF3C2-210ENST00000480989 C9orf116Q5BN46 136 aaPredicted RBP5.64□□□□□ -1.51
GTF3C2-210ENST00000480989 CD164L2Q6UWJ8 174 aa5.64□□□□□ -1.51
GTF3C2-210ENST00000480989 MRPL52Q86TS9 123 aaKnown RBP5.64□□□□□ -1.51
GTF3C2-210ENST00000480989 PRR26Q8N8Z3 221 aa5.64□□□□□ -1.51
GTF3C2-210ENST00000480989 H3BS24 57 aa5.63□□□□□ -1.51
GTF3C2-210ENST00000480989 I3L3M4 83 aa5.63□□□□□ -1.51
GTF3C2-210ENST00000480989 RNASE13Q5GAN3 156 aaKnown RBP5.63□□□□□ -1.51
GTF3C2-210ENST00000480989 KRTAP7-1Q8IUC3 87 aa5.63□□□□□ -1.51
GTF3C2-210ENST00000480989 FAM104AQ969W3 186 aa5.63□□□□□ -1.51
GTF3C2-210ENST00000480989 LOC107984640A0A0U1RRK4 108 aa5.62□□□□□ -1.51
GTF3C2-210ENST00000480989 KRTAP1-4P0C5Y4 121 aa5.62□□□□□ -1.51
GTF3C2-210ENST00000480989 S100A1P23297 94 aa5.62□□□□□ -1.51
GTF3C2-210ENST00000480989 EIF5AL1Q6IS14 154 aaKnown RBP5.62□□□□□ -1.51
GTF3C2-210ENST00000480989 ZNF664Q8N3J9 261 aa5.62□□□□□ -1.51
GTF3C2-210ENST00000480989 OPRPNQ99935 248 aaPredicted RBP5.62□□□□□ -1.51
GTF3C2-210ENST00000480989 TRBV27A0A0K0K1C4 114 aa5.61□□□□□ -1.51
GTF3C2-210ENST00000480989 FAM168BA1KXE4 195 aa5.61□□□□□ -1.51
GTF3C2-210ENST00000480989 SMKR1H3BMG3 65 aa5.61□□□□□ -1.51
GTF3C2-210ENST00000480989 PMCHP20382 165 aa5.61□□□□□ -1.51
GTF3C2-210ENST00000480989 C1orf137Q5JT78 98 aa5.61□□□□□ -1.51
GTF3C2-210ENST00000480989 TCTE3Q8IZS6 198 aa5.61□□□□□ -1.51
GTF3C2-210ENST00000480989 MRAP2Q96G30 205 aa5.61□□□□□ -1.51
GTF3C2-210ENST00000480989 BTF3L4Q96K17 158 aa5.61□□□□□ -1.51
GTF3C2-210ENST00000480989 BIN3Q9NQY0 253 aa5.61□□□□□ -1.51
GTF3C2-210ENST00000480989 UBE2D4Q9Y2X8 147 aa5.61□□□□□ -1.51
GTF3C2-210ENST00000480989 C7orf77A4D0Y5 90 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 APOMO95445 188 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 RAB4AP20338 218 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 PCP4P48539 62 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 SS18Q15532 418 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 C10orf25Q5T742 122 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 Q6ZUT4 128 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 FAM231DQ6ZW35 169 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 C5orf38Q86SI9 138 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 AKAP14Q86UN6 197 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 AMN1Q8IY45 258 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 NRACQ8N912 160 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 TMEM101Q96IK0 257 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 ST20Q9HBF5 79 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 FAT4Q6V0I7 4981 aa5.6□□□□□ -1.51
GTF3C2-210ENST00000480989 TEX46H3BTG2 121 aa5.59□□□□□ -1.51
GTF3C2-210ENST00000480989 GATCO43716 136 aaKnown RBP5.59□□□□□ -1.51
GTF3C2-210ENST00000480989 MT-ND6P03923 174 aa5.59□□□□□ -1.51
GTF3C2-210ENST00000480989 IGLV7-43P04211 117 aa5.59□□□□□ -1.51
GTF3C2-210ENST00000480989 RPL18AQ02543 176 aaKnown RBP5.59□□□□□ -1.51
GTF3C2-210ENST00000480989 TEX261Q6UWH6 196 aa5.59□□□□□ -1.51
GTF3C2-210ENST00000480989 CAMK2N2Q96S95 79 aa5.59□□□□□ -1.51
GTF3C2-210ENST00000480989 TMEM191AQ9H0A3 160 aa5.59□□□□□ -1.51
GTF3C2-210ENST00000480989 TRAV13-1A0A0B4J241 112 aa5.58□□□□□ -1.52
GTF3C2-210ENST00000480989 H0Y9J4 135 aa5.58□□□□□ -1.52
GTF3C2-210ENST00000480989 COX7A2LO14548 114 aa5.58□□□□□ -1.52
GTF3C2-210ENST00000480989 C2orf48Q96LS8 159 aa5.58□□□□□ -1.52
GTF3C2-210ENST00000480989 PKIGQ9Y2B9 76 aa5.58□□□□□ -1.52
GTF3C2-210ENST00000480989 CSDC2Q9Y534 153 aaKnown RBP5.58□□□□□ -1.52
GTF3C2-210ENST00000480989 HIGD1CA8MV81 97 aa5.57□□□□□ -1.52
GTF3C2-210ENST00000480989 C1orf196B1AJZ1 125 aa5.57□□□□□ -1.52
GTF3C2-210ENST00000480989 S100A12P80511 92 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms