RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 MRAP2Q96G30 205 aa11.8□□□□□ -0.52
ABCF3-214ENST00000480562 IGHV1-58A0A0C4DH39 117 aa11.79□□□□□ -0.52
ABCF3-214ENST00000480562 A0A1B0GUT8 65 aa11.79□□□□□ -0.52
ABCF3-214ENST00000480562 HIGD1CA8MV81 97 aa11.79□□□□□ -0.52
ABCF3-214ENST00000480562 TMEM191AQ9H0A3 160 aa11.79□□□□□ -0.52
ABCF3-214ENST00000480562 POLR2KP53803 58 aaKnown RBP11.78□□□□□ -0.52
ABCF3-214ENST00000480562 SS18Q15532 418 aa11.78□□□□□ -0.52
ABCF3-214ENST00000480562 TSKUQ8WUA8 353 aa11.78□□□□□ -0.52
ABCF3-214ENST00000480562 CARD19Q96LW7 228 aa11.78□□□□□ -0.52
ABCF3-214ENST00000480562 SMIM7Q9BQ49 75 aa11.78□□□□□ -0.52
ABCF3-214ENST00000480562 CDC42SE2Q9NRR3 84 aa11.78□□□□□ -0.52
ABCF3-214ENST00000480562 RAB4AP20338 218 aa11.77□□□□□ -0.53
ABCF3-214ENST00000480562 LINC01551Q86U37 167 aa11.77□□□□□ -0.53
ABCF3-214ENST00000480562 AMN1Q8IY45 258 aa11.77□□□□□ -0.53
ABCF3-214ENST00000480562 CD164L2Q6UWJ8 174 aa11.76□□□□□ -0.53
ABCF3-214ENST00000480562 MRPL52Q86TS9 123 aaKnown RBP11.76□□□□□ -0.53
ABCF3-214ENST00000480562 AKAP14Q86UN6 197 aa11.76□□□□□ -0.53
ABCF3-214ENST00000480562 ZNF664Q8N3J9 261 aa11.76□□□□□ -0.53
ABCF3-214ENST00000480562 EIF5A2Q9GZV4 153 aaKnown RBP11.76□□□□□ -0.53
ABCF3-214ENST00000480562 TRBV27A0A0K0K1C4 114 aa11.75□□□□□ -0.53
ABCF3-214ENST00000480562 C7orf77A4D0Y5 90 aa11.75□□□□□ -0.53
ABCF3-214ENST00000480562 SMKR1H3BMG3 65 aa11.75□□□□□ -0.53
ABCF3-214ENST00000480562 ODF1Q14990 250 aa11.75□□□□□ -0.53
ABCF3-214ENST00000480562 LINC00474Q9P2X8 69 aa11.75□□□□□ -0.53
ABCF3-214ENST00000480562 ZNF561-AS1K7EIQ3 104 aa11.74□□□□□ -0.53
ABCF3-214ENST00000480562 SYCNQ0VAF6 134 aa11.74□□□□□ -0.53
ABCF3-214ENST00000480562 LINC01600Q96MT4 127 aa11.74□□□□□ -0.53
ABCF3-214ENST00000480562 OSTCQ9NRP0 149 aa11.74□□□□□ -0.53
ABCF3-214ENST00000480562 LRP2P98164 4655 aa11.73□□□□□ -0.53
ABCF3-214ENST00000480562 hCG_2014768A0A024R1R8 64 aa11.73□□□□□ -0.53
ABCF3-214ENST00000480562 ZNF727A8MUV8 499 aa11.73□□□□□ -0.53
ABCF3-214ENST00000480562 FAM210AQ96ND0 272 aa11.73□□□□□ -0.53
ABCF3-214ENST00000480562 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
ABCF3-214ENST00000480562 VCYO14598 125 aa11.72□□□□□ -0.53
ABCF3-214ENST00000480562 FCER1GP30273 86 aa11.72□□□□□ -0.53
ABCF3-214ENST00000480562 RNASE13Q5GAN3 156 aaKnown RBP11.72□□□□□ -0.53
ABCF3-214ENST00000480562 SRP19P09132 144 aaKnown RBP11.71□□□□□ -0.53
ABCF3-214ENST00000480562 CAMPP49913 170 aa11.71□□□□□ -0.53
ABCF3-214ENST00000480562 RIGQ13278 110 aa11.71□□□□□ -0.53
ABCF3-214ENST00000480562 NUP35Q8NFH5 326 aa11.71□□□□□ -0.53
ABCF3-214ENST00000480562 V9GYV3 84 aa11.71□□□□□ -0.53
ABCF3-214ENST00000480562 IGLV4-69A0A075B6H9 119 aa11.7□□□□□ -0.54
ABCF3-214ENST00000480562 GAGE2BQ13066 116 aa11.7□□□□□ -0.54
ABCF3-214ENST00000480562 NRACQ8N912 160 aa11.7□□□□□ -0.54
ABCF3-214ENST00000480562 COX7A2LO14548 114 aa11.69□□□□□ -0.54
ABCF3-214ENST00000480562 MALP21145 153 aa11.69□□□□□ -0.54
ABCF3-214ENST00000480562 PTTG1IPP53801 180 aa11.69□□□□□ -0.54
ABCF3-214ENST00000480562 SUMO2P61956 95 aaKnown RBP11.69□□□□□ -0.54
ABCF3-214ENST00000480562 UBE2D4Q9Y2X8 147 aa11.69□□□□□ -0.54
ABCF3-214ENST00000480562 TRAV13-1A0A0B4J241 112 aa11.68□□□□□ -0.54
ABCF3-214ENST00000480562 C1orf196B1AJZ1 125 aa11.68□□□□□ -0.54
ABCF3-214ENST00000480562 SPINK6Q6UWN8 80 aa11.68□□□□□ -0.54
ABCF3-214ENST00000480562 A0A0J9YXV3 536 aa11.67□□□□□ -0.54
ABCF3-214ENST00000480562 LOC107984640A0A0U1RRK4 108 aa11.67□□□□□ -0.54
ABCF3-214ENST00000480562 SRSF9Q13242 221 aaKnown RBP eCLIP11.67□□□□□ -0.54
ABCF3-214ENST00000480562 Q6ZRP5 223 aa11.67□□□□□ -0.54
ABCF3-214ENST00000480562 ISOC2Q96AB3 205 aa11.67□□□□□ -0.54
ABCF3-214ENST00000480562 CSDC2Q9Y534 153 aaKnown RBP11.67□□□□□ -0.54
ABCF3-214ENST00000480562 PPP1R17O96001 155 aa11.66□□□□□ -0.54
ABCF3-214ENST00000480562 MRPL51Q4U2R6 128 aaKnown RBP11.66□□□□□ -0.54
ABCF3-214ENST00000480562 REG3GQ6UW15 175 aa11.66□□□□□ -0.54
ABCF3-214ENST00000480562 Q6ZUT4 128 aa11.66□□□□□ -0.54
ABCF3-214ENST00000480562 C5orf38Q86SI9 138 aa11.66□□□□□ -0.54
ABCF3-214ENST00000480562 CAMK2N2Q96S95 79 aa11.66□□□□□ -0.54
ABCF3-214ENST00000480562 KIR2DL4Q99706 377 aa11.66□□□□□ -0.54
ABCF3-214ENST00000480562 A0A1W2PNN7 141 aa11.65□□□□□ -0.54
ABCF3-214ENST00000480562 KRTAP10-8P60410 259 aa11.65□□□□□ -0.54
ABCF3-214ENST00000480562 SMAGPQ0VAQ4 97 aa11.65□□□□□ -0.54
ABCF3-214ENST00000480562 TMEM241Q24JQ0 296 aa11.65□□□□□ -0.54
ABCF3-214ENST00000480562 NAT8BQ9UHF3 227 aa11.65□□□□□ -0.54
ABCF3-214ENST00000480562 RPL23P62829 140 aaKnown RBP11.64□□□□□ -0.55
ABCF3-214ENST00000480562 FAM104BQ5XKR9 115 aa11.64□□□□□ -0.55
ABCF3-214ENST00000480562 PPP1R2P9O14990 202 aa11.63□□□□□ -0.55
ABCF3-214ENST00000480562 APOMO95445 188 aa11.63□□□□□ -0.55
ABCF3-214ENST00000480562 ADIRFQ15847 76 aa11.63□□□□□ -0.55
ABCF3-214ENST00000480562 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.62□□□□□ -0.55
ABCF3-214ENST00000480562 C2orf48Q96LS8 159 aa11.62□□□□□ -0.55
ABCF3-214ENST00000480562 OPRPNQ99935 248 aaPredicted RBP11.62□□□□□ -0.55
ABCF3-214ENST00000480562 TIMM21Q9BVV7 248 aa11.62□□□□□ -0.55
ABCF3-214ENST00000480562 C9JQL5 133 aa11.61□□□□□ -0.55
ABCF3-214ENST00000480562 RPL39P62891 51 aaKnown RBP11.61□□□□□ -0.55
ABCF3-214ENST00000480562 RPL18AQ02543 176 aaKnown RBP11.61□□□□□ -0.55
ABCF3-214ENST00000480562 FAM74A3Q4VXF1 159 aa11.61□□□□□ -0.55
ABCF3-214ENST00000480562 C9orf116Q5BN46 136 aaPredicted RBP11.61□□□□□ -0.55
ABCF3-214ENST00000480562 TMEM18Q96B42 140 aa11.61□□□□□ -0.55
ABCF3-214ENST00000480562 SMIM27A0A1W2PRY6 76 aa11.6□□□□□ -0.55
ABCF3-214ENST00000480562 CKS2P33552 79 aa11.6□□□□□ -0.55
ABCF3-214ENST00000480562 SPAG11BQ08648 103 aa11.6□□□□□ -0.55
ABCF3-214ENST00000480562 C20orf78Q9BR46 151 aa11.6□□□□□ -0.55
ABCF3-214ENST00000480562 FAM104AQ969W3 186 aa11.59□□□□□ -0.55
ABCF3-214ENST00000480562 NAT8Q9UHE5 227 aa11.59□□□□□ -0.55
ABCF3-214ENST00000480562 PSORS1C2Q9UIG4 136 aa11.59□□□□□ -0.55
ABCF3-214ENST00000480562 RNF213Q63HN8 5207 aa11.58□□□□□ -0.56
ABCF3-214ENST00000480562 TRBV24-1A0A075B6N3 115 aa11.58□□□□□ -0.56
ABCF3-214ENST00000480562 LINC00862A6NCI5 91 aa11.58□□□□□ -0.56
ABCF3-214ENST00000480562 TNFRSF6BO95407 300 aa11.58□□□□□ -0.56
ABCF3-214ENST00000480562 MT-ND6P03923 174 aa11.57□□□□□ -0.56
ABCF3-214ENST00000480562 RPL32P62910 135 aaKnown RBP11.57□□□□□ -0.56
ABCF3-214ENST00000480562 SRSF3P84103 164 aaKnown RBP11.57□□□□□ -0.56
ABCF3-214ENST00000480562 PHF5AQ7RTV0 110 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms