RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	LINC01556	Q5JQF7	62 aa		10.39	□□□□□ -0.75
HDLBP-238	ENST00000479894	SMIM2	Q9BVW6	85 aa		10.39	□□□□□ -0.75
HDLBP-238	ENST00000479894	RNF213	Q63HN8	5207 aa		10.38	□□□□□ -0.75
HDLBP-238	ENST00000479894	TMEM262	E9PQX1	116 aa		10.38	□□□□□ -0.75
HDLBP-238	ENST00000479894	NPY	P01303	97 aa		10.38	□□□□□ -0.75
HDLBP-238	ENST00000479894	GAS8-AS1	O95177	125 aa		10.37	□□□□□ -0.75
HDLBP-238	ENST00000479894		Q6ZSA8	131 aa		10.37	□□□□□ -0.75
HDLBP-238	ENST00000479894	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.37	□□□□□ -0.75
HDLBP-238	ENST00000479894	LRCOL1	A6NCL2	159 aa		10.36	□□□□□ -0.75
HDLBP-238	ENST00000479894	RAB5B	P61020	215 aa		10.36	□□□□□ -0.75
HDLBP-238	ENST00000479894	KIAA1644	Q3SXP7	199 aa		10.36	□□□□□ -0.75
HDLBP-238	ENST00000479894	ORMDL2	Q53FV1	153 aa		10.36	□□□□□ -0.75
HDLBP-238	ENST00000479894		Q8N8P6	123 aa		10.36	□□□□□ -0.75
HDLBP-238	ENST00000479894	PRSS3P2	Q8NHM4	247 aa		10.36	□□□□□ -0.75
HDLBP-238	ENST00000479894	LINC01549	A6NIU2	74 aa		10.35	□□□□□ -0.75
HDLBP-238	ENST00000479894	COLCA2	A8K830	154 aa		10.35	□□□□□ -0.75
HDLBP-238	ENST00000479894	TSHB	P01222	138 aa		10.35	□□□□□ -0.75
HDLBP-238	ENST00000479894	AMMECR1L	Q6DCA0	310 aa		10.35	□□□□□ -0.75
HDLBP-238	ENST00000479894	NTM-AS1	Q6ZSK4	140 aa		10.35	□□□□□ -0.75
HDLBP-238	ENST00000479894	NIT1	Q86X76	327 aa		10.35	□□□□□ -0.75
HDLBP-238	ENST00000479894	WFDC10B	Q8IUB3	73 aa		10.35	□□□□□ -0.75
HDLBP-238	ENST00000479894		A0A1B0GUV1	79 aa		10.34	□□□□□ -0.75
HDLBP-238	ENST00000479894	ZNF25	P17030	456 aa	Predicted RBP	10.34	□□□□□ -0.75
HDLBP-238	ENST00000479894		Q8N814	137 aa		10.34	□□□□□ -0.75
HDLBP-238	ENST00000479894	TMEM101	Q96IK0	257 aa		10.34	□□□□□ -0.75
HDLBP-238	ENST00000479894	LOC389332	A0A1B0GUA5	103 aa		10.33	□□□□□ -0.76
HDLBP-238	ENST00000479894	LAGE3	Q14657	143 aa		10.33	□□□□□ -0.76
HDLBP-238	ENST00000479894	ESD	P10768	282 aa		10.32	□□□□□ -0.76
HDLBP-238	ENST00000479894	KRTAP10-4	P60372	401 aa	Predicted RBP	10.32	□□□□□ -0.76
HDLBP-238	ENST00000479894	DGAT2L7P	Q6IED9	249 aa		10.32	□□□□□ -0.76
HDLBP-238	ENST00000479894	FA2H	Q7L5A8	372 aa		10.32	□□□□□ -0.76
HDLBP-238	ENST00000479894	TRAV8-3	A0A0A6YYJ7	113 aa		10.31	□□□□□ -0.76
HDLBP-238	ENST00000479894	PSCA	O43653	123 aa		10.31	□□□□□ -0.76
HDLBP-238	ENST00000479894		Q0VG73	95 aa		10.31	□□□□□ -0.76
HDLBP-238	ENST00000479894	GAGE6	Q13070	117 aa		10.31	□□□□□ -0.76
HDLBP-238	ENST00000479894	RMI2	Q96E14	147 aa		10.31	□□□□□ -0.76
HDLBP-238	ENST00000479894	SCO1	O75880	301 aa		10.3	□□□□□ -0.76
HDLBP-238	ENST00000479894	IGHV3-30	P01768	117 aa		10.3	□□□□□ -0.76
HDLBP-238	ENST00000479894	IGHV3-33	P01772	117 aa		10.3	□□□□□ -0.76
HDLBP-238	ENST00000479894	TRGC2	P03986	189 aa		10.3	□□□□□ -0.76
HDLBP-238	ENST00000479894	IGHV3-30-3	P0DP02	117 aa		10.3	□□□□□ -0.76
HDLBP-238	ENST00000479894	IGHV3-30-5	P0DP03	117 aa		10.3	□□□□□ -0.76
HDLBP-238	ENST00000479894	MRPL52	Q86TS9	123 aa	Known RBP	10.3	□□□□□ -0.76
HDLBP-238	ENST00000479894	C20orf203	Q8NBC4	194 aa		10.3	□□□□□ -0.76
HDLBP-238	ENST00000479894	TIMM21	Q9BVV7	248 aa		10.3	□□□□□ -0.76
HDLBP-238	ENST00000479894	CSDC2	Q9Y534	153 aa	Known RBP	10.3	□□□□□ -0.76
HDLBP-238	ENST00000479894	COX11	Q9Y6N1	276 aa		10.3	□□□□□ -0.76
HDLBP-238	ENST00000479894	LRP2	P98164	4655 aa		10.29	□□□□□ -0.76
HDLBP-238	ENST00000479894	IBA57-AS1	B1ANH7	110 aa		10.29	□□□□□ -0.76
HDLBP-238	ENST00000479894	CRP	P02741	224 aa		10.29	□□□□□ -0.76
HDLBP-238	ENST00000479894	FGF6	P10767	208 aa		10.29	□□□□□ -0.76
HDLBP-238	ENST00000479894	IFI27	P40305	119 aa	Predicted RBP	10.29	□□□□□ -0.76
HDLBP-238	ENST00000479894	RBX1	P62877	108 aa		10.29	□□□□□ -0.76
HDLBP-238	ENST00000479894	RNASEK	Q6P5S7	137 aa	Known RBP	10.29	□□□□□ -0.76
HDLBP-238	ENST00000479894	OR5A1	Q8NGJ0	315 aa		10.29	□□□□□ -0.76
HDLBP-238	ENST00000479894	SPANXA1	Q9NS26	97 aa		10.29	□□□□□ -0.76
HDLBP-238	ENST00000479894	ANG	P03950	147 aa	Known RBP	10.28	□□□□□ -0.76
HDLBP-238	ENST00000479894	PAPPA-AS1	Q5QFB9	102 aa		10.28	□□□□□ -0.76
HDLBP-238	ENST00000479894	TM2D2	Q9BX73	214 aa		10.28	□□□□□ -0.76
HDLBP-238	ENST00000479894	AP5S1	Q9NUS5	200 aa		10.28	□□□□□ -0.76
HDLBP-238	ENST00000479894	CYSLTR1	Q9Y271	337 aa		10.28	□□□□□ -0.76
HDLBP-238	ENST00000479894	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.27	□□□□□ -0.77
HDLBP-238	ENST00000479894	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.27	□□□□□ -0.77
HDLBP-238	ENST00000479894	LINC01546	A6NGU7	62 aa		10.27	□□□□□ -0.77
HDLBP-238	ENST00000479894	NPS	P0C0P6	89 aa		10.27	□□□□□ -0.77
HDLBP-238	ENST00000479894	LINC00614	P0C842	121 aa		10.27	□□□□□ -0.77
HDLBP-238	ENST00000479894	MPV17L2	Q567V2	206 aa		10.27	□□□□□ -0.77
HDLBP-238	ENST00000479894	C18orf32	Q8TCD1	76 aa		10.27	□□□□□ -0.77
HDLBP-238	ENST00000479894	PKHD1L1	Q86WI1	4243 aa		10.26	□□□□□ -0.77
HDLBP-238	ENST00000479894	MIA	Q16674	131 aa		10.26	□□□□□ -0.77
HDLBP-238	ENST00000479894	BAGE3	Q86Y29	109 aa		10.26	□□□□□ -0.77
HDLBP-238	ENST00000479894	CHCHD1	Q96BP2	118 aa	Known RBP	10.26	□□□□□ -0.77
HDLBP-238	ENST00000479894	KLK12	Q9UKR0	248 aa		10.26	□□□□□ -0.77
HDLBP-238	ENST00000479894	TRAV8-4	A0A0B4J246	113 aa		10.25	□□□□□ -0.77
HDLBP-238	ENST00000479894	CCL25	O15444	150 aa		10.25	□□□□□ -0.77
HDLBP-238	ENST00000479894	SCX	Q7RTU7	201 aa		10.25	□□□□□ -0.77
HDLBP-238	ENST00000479894	PYGO1	Q9Y3Y4	419 aa		10.25	□□□□□ -0.77
HDLBP-238	ENST00000479894	C2orf66	Q6UXQ4	117 aa		10.24	□□□□□ -0.77
HDLBP-238	ENST00000479894		Q8N976	141 aa		10.24	□□□□□ -0.77
HDLBP-238	ENST00000479894	UBE2W	Q96B02	151 aa		10.24	□□□□□ -0.77
HDLBP-238	ENST00000479894	REG3A	Q06141	175 aa		10.23	□□□□□ -0.77
HDLBP-238	ENST00000479894		Q6ZN92	141 aa		10.23	□□□□□ -0.77
HDLBP-238	ENST00000479894	LINC00269	Q8N2A0	174 aa		10.23	□□□□□ -0.77
HDLBP-238	ENST00000479894	ZNF664	Q8N3J9	261 aa		10.23	□□□□□ -0.77
HDLBP-238	ENST00000479894	PRR34	Q9NV39	138 aa		10.23	□□□□□ -0.77
HDLBP-238	ENST00000479894	UBE2D4	Q9Y2X8	147 aa		10.23	□□□□□ -0.77
HDLBP-238	ENST00000479894	C1orf196	B1AJZ1	125 aa		10.22	□□□□□ -0.77
HDLBP-238	ENST00000479894	MRPS36	P82909	103 aa	Known RBP	10.22	□□□□□ -0.77
HDLBP-238	ENST00000479894	TMEM141	Q96I45	108 aa		10.22	□□□□□ -0.77
HDLBP-238	ENST00000479894	C1orf43	Q9BWL3	253 aa		10.22	□□□□□ -0.77
HDLBP-238	ENST00000479894	CDC42SE2	Q9NRR3	84 aa		10.22	□□□□□ -0.77
HDLBP-238	ENST00000479894	TOMM6	Q96B49	74 aa		10.21	□□□□□ -0.77
HDLBP-238	ENST00000479894	IGLV4-60	A0A075B6I1	120 aa		10.2	□□□□□ -0.78
HDLBP-238	ENST00000479894	HSBP1	O75506	76 aa		10.2	□□□□□ -0.78
HDLBP-238	ENST00000479894	HBD	P02042	147 aa		10.2	□□□□□ -0.78
HDLBP-238	ENST00000479894	SS18	Q15532	418 aa		10.2	□□□□□ -0.78
HDLBP-238	ENST00000479894	ERAS	Q7Z444	233 aa		10.2	□□□□□ -0.78
HDLBP-238	ENST00000479894	SCGB3A1	Q96QR1	104 aa		10.2	□□□□□ -0.78
HDLBP-238	ENST00000479894	TIMM17A	Q99595	171 aa		10.2	□□□□□ -0.78
HDLBP-238	ENST00000479894	CHAC1	Q9BUX1	264 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms