RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 DGAT2L7PQ6IED9 249 aa12.42□□□□□ -0.42
AGRN-208ENST00000479707 SLC7A5P1Q8MH63 180 aa12.42□□□□□ -0.42
AGRN-208ENST00000479707 SVBPQ8N300 66 aa12.42□□□□□ -0.42
AGRN-208ENST00000479707 MRPL52Q86TS9 123 aaKnown RBP12.41□□□□□ -0.42
AGRN-208ENST00000479707 NTN5Q8WTR8 489 aaPredicted RBP12.41□□□□□ -0.42
AGRN-208ENST00000479707 MAP1LC3AQ9H492 121 aa12.41□□□□□ -0.42
AGRN-208ENST00000479707 USP17L23D6RBM5 183 aa12.4□□□□□ -0.42
AGRN-208ENST00000479707 RAB5AP20339 215 aa12.4□□□□□ -0.42
AGRN-208ENST00000479707 TMEM18Q96B42 140 aa12.4□□□□□ -0.42
AGRN-208ENST00000479707 CDC42SE2Q9NRR3 84 aa12.4□□□□□ -0.42
AGRN-208ENST00000479707 LAMTOR2Q9Y2Q5 125 aa12.4□□□□□ -0.42
AGRN-208ENST00000479707 UBE2D4Q9Y2X8 147 aa12.4□□□□□ -0.42
AGRN-208ENST00000479707 GCSHP23434 173 aa12.39□□□□□ -0.43
AGRN-208ENST00000479707 KRTAP10-1P60331 282 aa12.39□□□□□ -0.43
AGRN-208ENST00000479707 RPL39P62891 51 aaKnown RBP12.39□□□□□ -0.43
AGRN-208ENST00000479707 ZNF664Q8N3J9 261 aa12.39□□□□□ -0.43
AGRN-208ENST00000479707 GNB1LQ9BYB4 327 aa12.39□□□□□ -0.43
AGRN-208ENST00000479707 TGIF2-C20orf24A0A0A6YYL0 155 aa12.38□□□□□ -0.43
AGRN-208ENST00000479707 GAGE12HA6NDE8 117 aa12.38□□□□□ -0.43
AGRN-208ENST00000479707 PRSS47A8MTI9 375 aa12.38□□□□□ -0.43
AGRN-208ENST00000479707 RNASE13Q5GAN3 156 aaKnown RBP12.38□□□□□ -0.43
AGRN-208ENST00000479707 SMAGPQ0VAQ4 97 aa12.37□□□□□ -0.43
AGRN-208ENST00000479707 CHCHD10Q8WYQ3 142 aaPredicted RBP12.37□□□□□ -0.43
AGRN-208ENST00000479707 LINC00959A0A1B0GUT2 108 aa12.36□□□□□ -0.43
AGRN-208ENST00000479707 Q8N8P6 123 aa12.36□□□□□ -0.43
AGRN-208ENST00000479707 FABP9Q0Z7S8 132 aa12.35□□□□□ -0.43
AGRN-208ENST00000479707 COX19Q49B96 90 aa12.35□□□□□ -0.43
AGRN-208ENST00000479707 C14orf177Q52M58 125 aa12.35□□□□□ -0.43
AGRN-208ENST00000479707 MRPL18Q9H0U6 180 aaKnown RBP12.35□□□□□ -0.43
AGRN-208ENST00000479707 CSDC2Q9Y534 153 aaKnown RBP12.35□□□□□ -0.43
AGRN-208ENST00000479707 PRSS1P07477 247 aa12.34□□□□□ -0.43
AGRN-208ENST00000479707 IFI27P40305 119 aaPredicted RBP12.34□□□□□ -0.43
AGRN-208ENST00000479707 XCL1P47992 114 aa12.34□□□□□ -0.43
AGRN-208ENST00000479707 LINC01620Q4KN68 170 aa12.34□□□□□ -0.43
AGRN-208ENST00000479707 Q6ZUT4 128 aa12.34□□□□□ -0.43
AGRN-208ENST00000479707 TIMM21Q9BVV7 248 aa12.34□□□□□ -0.43
AGRN-208ENST00000479707 RYR1P21817 5038 aa12.34□□□□□ -0.43
AGRN-208ENST00000479707 CCL25O15444 150 aa12.33□□□□□ -0.44
AGRN-208ENST00000479707 SS18Q15532 418 aa12.33□□□□□ -0.44
AGRN-208ENST00000479707 OPRPNQ99935 248 aaPredicted RBP12.33□□□□□ -0.44
AGRN-208ENST00000479707 CDK2AP2O75956 126 aa12.32□□□□□ -0.44
AGRN-208ENST00000479707 MT-ND6P03923 174 aa12.32□□□□□ -0.44
AGRN-208ENST00000479707 HERC2O95714 4834 aa12.31□□□□□ -0.44
AGRN-208ENST00000479707 TRAV13-1A0A0B4J241 112 aa12.31□□□□□ -0.44
AGRN-208ENST00000479707 FOXI1Q12951 378 aa12.31□□□□□ -0.44
AGRN-208ENST00000479707 ALKBH7Q9BT30 221 aaPredicted RBP12.31□□□□□ -0.44
AGRN-208ENST00000479707 NXT2Q9NPJ8 142 aaKnown RBP12.31□□□□□ -0.44
AGRN-208ENST00000479707 TRAPPC1Q9Y5R8 145 aa12.31□□□□□ -0.44
AGRN-208ENST00000479707 hDV102S1A0JD36 115 aa12.3□□□□□ -0.44
AGRN-208ENST00000479707 FAM104AQ969W3 186 aa12.3□□□□□ -0.44
AGRN-208ENST00000479707 SPANXA1Q9NS26 97 aa12.3□□□□□ -0.44
AGRN-208ENST00000479707 APOBP04114 4563 aaKnown RBP12.29□□□□□ -0.44
AGRN-208ENST00000479707 ORMDL2Q53FV1 153 aa12.29□□□□□ -0.44
AGRN-208ENST00000479707 PRSS3P2Q8NHM4 247 aa12.29□□□□□ -0.44
AGRN-208ENST00000479707 HAMPP81172 84 aa12.28□□□□□ -0.44
AGRN-208ENST00000479707 C2orf66Q6UXQ4 117 aa12.28□□□□□ -0.44
AGRN-208ENST00000479707 C15orf56Q8N910 161 aa12.28□□□□□ -0.44
AGRN-208ENST00000479707 C1orf196B1AJZ1 125 aa12.27□□□□□ -0.45
AGRN-208ENST00000479707 HIGD2BQ4VC39 106 aa12.27□□□□□ -0.45
AGRN-208ENST00000479707 CFAP161Q6P656 301 aa12.27□□□□□ -0.45
AGRN-208ENST00000479707 CD164L2Q6UWJ8 174 aa12.27□□□□□ -0.45
AGRN-208ENST00000479707 CBLN2Q8IUK8 224 aa12.27□□□□□ -0.45
AGRN-208ENST00000479707 FAM30AQ9NZY2 134 aa12.27□□□□□ -0.45
AGRN-208ENST00000479707 CYSLTR1Q9Y271 337 aa12.27□□□□□ -0.45
AGRN-208ENST00000479707 K7EMI3 77 aa12.26□□□□□ -0.45
AGRN-208ENST00000479707 XGP55808 180 aa12.26□□□□□ -0.45
AGRN-208ENST00000479707 MRPS36P82909 103 aaKnown RBP12.26□□□□□ -0.45
AGRN-208ENST00000479707 YPEL4Q96NS1 127 aa12.25□□□□□ -0.45
AGRN-208ENST00000479707 AP5S1Q9NUS5 200 aa12.25□□□□□ -0.45
AGRN-208ENST00000479707 PYGO1Q9Y3Y4 419 aa12.25□□□□□ -0.45
AGRN-208ENST00000479707 IGLV4-3A0A075B6K6 122 aa12.24□□□□□ -0.45
AGRN-208ENST00000479707 IFITM10A6NMD0 228 aa12.24□□□□□ -0.45
AGRN-208ENST00000479707 KRTAP17-1Q9BYP8 105 aa12.24□□□□□ -0.45
AGRN-208ENST00000479707 SMCO4Q9NRQ5 59 aa12.24□□□□□ -0.45
AGRN-208ENST00000479707 SLPIP03973 132 aa12.23□□□□□ -0.45
AGRN-208ENST00000479707 ZC2HC1BQ5TFG8 222 aa12.23□□□□□ -0.45
AGRN-208ENST00000479707 TMEM141Q96I45 108 aa12.23□□□□□ -0.45
AGRN-208ENST00000479707 DNAH8Q96JB1 4490 aa12.23□□□□□ -0.45
AGRN-208ENST00000479707 HSPG2P98160 4391 aa12.23□□□□□ -0.45
AGRN-208ENST00000479707 FA2HQ7L5A8 372 aa12.22□□□□□ -0.45
AGRN-208ENST00000479707 C5orf38Q86SI9 138 aa12.22□□□□□ -0.45
AGRN-208ENST00000479707 IGHV1-58A0A0C4DH39 117 aa12.21□□□□□ -0.45
AGRN-208ENST00000479707 MALP21145 153 aa12.21□□□□□ -0.45
AGRN-208ENST00000479707 C9orf163Q8N9P6 203 aa12.21□□□□□ -0.45
AGRN-208ENST00000479707 LINC00526Q96FQ7 95 aa12.21□□□□□ -0.45
AGRN-208ENST00000479707 COX7A2LO14548 114 aa12.2□□□□□ -0.46
AGRN-208ENST00000479707 G0S2P27469 103 aa12.2□□□□□ -0.46
AGRN-208ENST00000479707 TEX43Q6ZNM6 134 aa12.2□□□□□ -0.46
AGRN-208ENST00000479707 TOMM6Q96B49 74 aa12.2□□□□□ -0.46
AGRN-208ENST00000479707 GVQW2A0A096LPI5 108 aaPredicted RBP12.19□□□□□ -0.46
AGRN-208ENST00000479707 IGIPA6NJ69 53 aa12.19□□□□□ -0.46
AGRN-208ENST00000479707 CNBPP62633 177 aaKnown RBP12.19□□□□□ -0.46
AGRN-208ENST00000479707 Q6ZN92 141 aa12.19□□□□□ -0.46
AGRN-208ENST00000479707 C18orf32Q8TCD1 76 aa12.19□□□□□ -0.46
AGRN-208ENST00000479707 VCX2Q9H322 139 aa12.19□□□□□ -0.46
AGRN-208ENST00000479707 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.18□□□□□ -0.46
AGRN-208ENST00000479707 LINC01546A6NGU7 62 aa12.18□□□□□ -0.46
AGRN-208ENST00000479707 SMR3BP02814 79 aaPredicted RBP12.18□□□□□ -0.46
AGRN-208ENST00000479707 SCGB3A1Q96QR1 104 aa12.18□□□□□ -0.46
AGRN-208ENST00000479707 Q6ZSA8 131 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms