RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 IFITM2Q01629 132 aa11.07□□□□□ -0.64
CDKN1A-207ENST00000478800 CFAP161Q6P656 301 aa11.07□□□□□ -0.64
CDKN1A-207ENST00000478800 TMEM18Q96B42 140 aa11.07□□□□□ -0.64
CDKN1A-207ENST00000478800 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
CDKN1A-207ENST00000478800 TRBV24-1A0A075B6N3 115 aa11.06□□□□□ -0.64
CDKN1A-207ENST00000478800 TNFRSF6BO95407 300 aa11.06□□□□□ -0.64
CDKN1A-207ENST00000478800 CHCHD10Q8WYQ3 142 aaPredicted RBP11.06□□□□□ -0.64
CDKN1A-207ENST00000478800 MRPL52Q86TS9 123 aaKnown RBP11.05□□□□□ -0.64
CDKN1A-207ENST00000478800 ORMDL3Q8N138 153 aa11.05□□□□□ -0.64
CDKN1A-207ENST00000478800 TMEM218A2RU14 115 aa11.04□□□□□ -0.64
CDKN1A-207ENST00000478800 SS18Q15532 418 aa11.04□□□□□ -0.64
CDKN1A-207ENST00000478800 Q5VSD8 79 aa11.04□□□□□ -0.64
CDKN1A-207ENST00000478800 Q6ZSA8 131 aa11.04□□□□□ -0.64
CDKN1A-207ENST00000478800 PHOX2AO14813 284 aa11.03□□□□□ -0.64
CDKN1A-207ENST00000478800 RPL32P62910 135 aaKnown RBP11.03□□□□□ -0.64
CDKN1A-207ENST00000478800 TMEM136Q6ZRR5 245 aa11.03□□□□□ -0.64
CDKN1A-207ENST00000478800 ZNF664Q8N3J9 261 aa11.03□□□□□ -0.64
CDKN1A-207ENST00000478800 SMIM2Q9BVW6 85 aa11.03□□□□□ -0.64
CDKN1A-207ENST00000478800 CDC42SE2Q9NRR3 84 aa11.03□□□□□ -0.64
CDKN1A-207ENST00000478800 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.02□□□□□ -0.65
CDKN1A-207ENST00000478800 NPYP01303 97 aa11.02□□□□□ -0.65
CDKN1A-207ENST00000478800 XCL1P47992 114 aa11.02□□□□□ -0.65
CDKN1A-207ENST00000478800 PRELID3AQ96N28 172 aa11.02□□□□□ -0.65
CDKN1A-207ENST00000478800 LINC00959A0A1B0GUT2 108 aa11.01□□□□□ -0.65
CDKN1A-207ENST00000478800 CCL25O15444 150 aa11.01□□□□□ -0.65
CDKN1A-207ENST00000478800 RAB5AP20339 215 aa11.01□□□□□ -0.65
CDKN1A-207ENST00000478800 COMMD7Q86VX2 200 aa11.01□□□□□ -0.65
CDKN1A-207ENST00000478800 C9orf163Q8N9P6 203 aa11.01□□□□□ -0.65
CDKN1A-207ENST00000478800 CSDC2Q9Y534 153 aaKnown RBP11.01□□□□□ -0.65
CDKN1A-207ENST00000478800 IMMP2LQ96T52 175 aa11□□□□□ -0.65
CDKN1A-207ENST00000478800 CHAC1Q9BUX1 264 aa11□□□□□ -0.65
CDKN1A-207ENST00000478800 CTDSP1Q9GZU7 261 aa11□□□□□ -0.65
CDKN1A-207ENST00000478800 UBE2D4Q9Y2X8 147 aa11□□□□□ -0.65
CDKN1A-207ENST00000478800 ADCYAP1P18509 176 aa10.99□□□□□ -0.65
CDKN1A-207ENST00000478800 CNBPP62633 177 aaKnown RBP10.99□□□□□ -0.65
CDKN1A-207ENST00000478800 SCXQ7RTU7 201 aa10.99□□□□□ -0.65
CDKN1A-207ENST00000478800 SEC11CQ9BY50 192 aa10.99□□□□□ -0.65
CDKN1A-207ENST00000478800 LAMTOR2Q9Y2Q5 125 aa10.99□□□□□ -0.65
CDKN1A-207ENST00000478800 FOXI1Q12951 378 aa10.98□□□□□ -0.65
CDKN1A-207ENST00000478800 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
CDKN1A-207ENST00000478800 TIMM21Q9BVV7 248 aa10.98□□□□□ -0.65
CDKN1A-207ENST00000478800 IGHV3-64A0A075B6Q5 118 aa10.97□□□□□ -0.65
CDKN1A-207ENST00000478800 C1orf196B1AJZ1 125 aa10.97□□□□□ -0.65
CDKN1A-207ENST00000478800 INAFM2P0DMQ5 153 aa10.97□□□□□ -0.65
CDKN1A-207ENST00000478800 S100PP25815 95 aa10.97□□□□□ -0.65
CDKN1A-207ENST00000478800 C15orf56Q8N910 161 aa10.97□□□□□ -0.65
CDKN1A-207ENST00000478800 MAP1LC3AQ9H492 121 aa10.97□□□□□ -0.65
CDKN1A-207ENST00000478800 TRAV13-1A0A0B4J241 112 aa10.96□□□□□ -0.65
CDKN1A-207ENST00000478800 PLA2G1BP04054 148 aaKnown RBP10.96□□□□□ -0.65
CDKN1A-207ENST00000478800 RNASE13Q5GAN3 156 aaKnown RBP10.96□□□□□ -0.65
CDKN1A-207ENST00000478800 CD164L2Q6UWJ8 174 aa10.96□□□□□ -0.65
CDKN1A-207ENST00000478800 CIRBP-AS1Q8TBR5 109 aa10.96□□□□□ -0.65
CDKN1A-207ENST00000478800 IGHV1-58A0A0C4DH39 117 aa10.95□□□□□ -0.66
CDKN1A-207ENST00000478800 LOC389332A0A1B0GUA5 103 aa10.95□□□□□ -0.66
CDKN1A-207ENST00000478800 RPL39P62891 51 aaKnown RBP10.95□□□□□ -0.66
CDKN1A-207ENST00000478800 Q6ZUT4 128 aa10.95□□□□□ -0.66
CDKN1A-207ENST00000478800 LINC00528Q8N1L1 170 aa10.95□□□□□ -0.66
CDKN1A-207ENST00000478800 DPH3Q96FX2 82 aa10.95□□□□□ -0.66
CDKN1A-207ENST00000478800 SPANXA1Q9NS26 97 aa10.95□□□□□ -0.66
CDKN1A-207ENST00000478800 HERC1Q15751 4861 aa10.95□□□□□ -0.66
CDKN1A-207ENST00000478800 GVQW2A0A096LPI5 108 aaPredicted RBP10.94□□□□□ -0.66
CDKN1A-207ENST00000478800 MALP21145 153 aa10.94□□□□□ -0.66
CDKN1A-207ENST00000478800 SDIM1Q6ZPB5 146 aa10.94□□□□□ -0.66
CDKN1A-207ENST00000478800 TRAV9-1A0A075B6T8 112 aa10.93□□□□□ -0.66
CDKN1A-207ENST00000478800 PRSS47A8MTI9 375 aa10.92□□□□□ -0.66
CDKN1A-207ENST00000478800 ZNF561-AS1K7EIQ3 104 aa10.92□□□□□ -0.66
CDKN1A-207ENST00000478800 COX7A2LO14548 114 aa10.92□□□□□ -0.66
CDKN1A-207ENST00000478800 SLPIP03973 132 aa10.92□□□□□ -0.66
CDKN1A-207ENST00000478800 IFI27P40305 119 aaPredicted RBP10.92□□□□□ -0.66
CDKN1A-207ENST00000478800 Q8N8P6 123 aa10.91□□□□□ -0.66
CDKN1A-207ENST00000478800 MRPS36P82909 103 aaKnown RBP10.9□□□□□ -0.66
CDKN1A-207ENST00000478800 RHEBQ15382 184 aa10.9□□□□□ -0.66
CDKN1A-207ENST00000478800 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.9□□□□□ -0.66
CDKN1A-207ENST00000478800 IFITM10A6NMD0 228 aa10.89□□□□□ -0.67
CDKN1A-207ENST00000478800 ORMDL2Q53FV1 153 aa10.89□□□□□ -0.67
CDKN1A-207ENST00000478800 NXT2Q9NPJ8 142 aaKnown RBP10.89□□□□□ -0.67
CDKN1A-207ENST00000478800 RPS10P5Q9NQ39 176 aa10.89□□□□□ -0.67
CDKN1A-207ENST00000478800 PKIGQ9Y2B9 76 aa10.89□□□□□ -0.67
CDKN1A-207ENST00000478800 K7EMI3 77 aa10.88□□□□□ -0.67
CDKN1A-207ENST00000478800 APOMO95445 188 aa10.88□□□□□ -0.67
CDKN1A-207ENST00000478800 OPRPNQ99935 248 aaPredicted RBP10.88□□□□□ -0.67
CDKN1A-207ENST00000478800 CYSLTR1Q9Y271 337 aa10.88□□□□□ -0.67
CDKN1A-207ENST00000478800 CARHSP1Q9Y2V2 147 aaKnown RBP10.88□□□□□ -0.67
CDKN1A-207ENST00000478800 G0S2P27469 103 aa10.87□□□□□ -0.67
CDKN1A-207ENST00000478800 COX6A2Q02221 97 aa10.87□□□□□ -0.67
CDKN1A-207ENST00000478800 KIAA1644Q3SXP7 199 aa10.87□□□□□ -0.67
CDKN1A-207ENST00000478800 COX19Q49B96 90 aa10.87□□□□□ -0.67
CDKN1A-207ENST00000478800 C10orf91Q5T1B1 145 aa10.87□□□□□ -0.67
CDKN1A-207ENST00000478800 Q6ZN92 141 aa10.87□□□□□ -0.67
CDKN1A-207ENST00000478800 C5orf38Q86SI9 138 aa10.87□□□□□ -0.67
CDKN1A-207ENST00000478800 CARD19Q96LW7 228 aa10.87□□□□□ -0.67
CDKN1A-207ENST00000478800 PYGO1Q9Y3Y4 419 aa10.87□□□□□ -0.67
CDKN1A-207ENST00000478800 SYCNQ0VAF6 134 aa10.86□□□□□ -0.67
CDKN1A-207ENST00000478800 NDUFA5Q16718 116 aa10.86□□□□□ -0.67
CDKN1A-207ENST00000478800 C2orf66Q6UXQ4 117 aa10.86□□□□□ -0.67
CDKN1A-207ENST00000478800 LINC00526Q96FQ7 95 aa10.86□□□□□ -0.67
CDKN1A-207ENST00000478800 TMEM141Q96I45 108 aa10.86□□□□□ -0.67
CDKN1A-207ENST00000478800 GNB1LQ9BYB4 327 aa10.86□□□□□ -0.67
CDKN1A-207ENST00000478800 PANO1I0J062 215 aa10.85□□□□□ -0.67
CDKN1A-207ENST00000478800 CHTF8P0CG12 524 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms