RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 HBDP02042 147 aa5.59□□□□□ -1.51
HDAC6-221ENST00000477561 BTF3P20290 206 aaKnown RBP5.59□□□□□ -1.51
HDAC6-221ENST00000477561 POLR2KP53803 58 aaKnown RBP5.59□□□□□ -1.51
HDAC6-221ENST00000477561 TIRAPP58753 221 aa5.59□□□□□ -1.51
HDAC6-221ENST00000477561 LELP1Q5T871 98 aa5.59□□□□□ -1.51
HDAC6-221ENST00000477561 FAM19A2Q8N3H0 131 aa5.59□□□□□ -1.51
HDAC6-221ENST00000477561 TMEM70Q9BUB7 260 aa5.59□□□□□ -1.51
HDAC6-221ENST00000477561 HSPB8Q9UJY1 196 aa5.59□□□□□ -1.51
HDAC6-221ENST00000477561 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
HDAC6-221ENST00000477561 RYR1P21817 5038 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 TRBV27A0A0K0K1C4 114 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 LINC01549A6NIU2 74 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 I3L3M4 83 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 LEPROTL1O95214 131 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 LINC00694P0DN24 101 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 FCER1GP30273 86 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 RPL36AP83881 106 aaKnown RBP5.58□□□□□ -1.52
HDAC6-221ENST00000477561 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 Q8N3U1 123 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 NEXN-AS1Q8NBZ9 246 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 RPL36ALQ969Q0 106 aaKnown RBP5.58□□□□□ -1.52
HDAC6-221ENST00000477561 Q9HAA7 133 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 HSPG2P98160 4391 aa5.58□□□□□ -1.52
HDAC6-221ENST00000477561 TRBV7-3A0A075B6L6 115 aa5.57□□□□□ -1.52
HDAC6-221ENST00000477561 PMCHL1Q16048 86 aa5.57□□□□□ -1.52
HDAC6-221ENST00000477561 LINC01556Q5JQF7 62 aa5.57□□□□□ -1.52
HDAC6-221ENST00000477561 C10orf126Q8N4M7 172 aa5.57□□□□□ -1.52
HDAC6-221ENST00000477561 A0A087WTM6 91 aa5.56□□□□□ -1.52
HDAC6-221ENST00000477561 IBA57-AS1B1ANH7 110 aa5.56□□□□□ -1.52
HDAC6-221ENST00000477561 K7EP13 123 aa5.56□□□□□ -1.52
HDAC6-221ENST00000477561 EREGO14944 169 aa5.56□□□□□ -1.52
HDAC6-221ENST00000477561 ATP5LO75964 103 aa5.56□□□□□ -1.52
HDAC6-221ENST00000477561 SMIM6P0DI80 62 aa5.56□□□□□ -1.52
HDAC6-221ENST00000477561 KRTDAPP60985 99 aa5.56□□□□□ -1.52
HDAC6-221ENST00000477561 DAZ4Q86SG3 579 aaKnown RBP5.56□□□□□ -1.52
HDAC6-221ENST00000477561 MAP1LC3CQ9BXW4 147 aa5.56□□□□□ -1.52
HDAC6-221ENST00000477561 DAZ3Q9NR90 486 aaKnown RBP5.56□□□□□ -1.52
HDAC6-221ENST00000477561 C20orf202A1L168 122 aa5.55□□□□□ -1.52
HDAC6-221ENST00000477561 PSCAO43653 123 aa5.55□□□□□ -1.52
HDAC6-221ENST00000477561 COTL1Q14019 142 aa5.55□□□□□ -1.52
HDAC6-221ENST00000477561 JOSD1Q15040 202 aaPredicted RBP5.55□□□□□ -1.52
HDAC6-221ENST00000477561 CYSLTR1Q9Y271 337 aa5.55□□□□□ -1.52
HDAC6-221ENST00000477561 A0A096LNJ9 63 aa5.54□□□□□ -1.52
HDAC6-221ENST00000477561 SCGB1D1O95968 90 aa5.54□□□□□ -1.52
HDAC6-221ENST00000477561 TSHBP01222 138 aa5.54□□□□□ -1.52
HDAC6-221ENST00000477561 C3orf79P0CE67 100 aa5.54□□□□□ -1.52
HDAC6-221ENST00000477561 UBE2D3P61077 147 aa5.54□□□□□ -1.52
HDAC6-221ENST00000477561 UBE2D2P62837 147 aa5.54□□□□□ -1.52
HDAC6-221ENST00000477561 TMEM97Q5BJF2 176 aa5.54□□□□□ -1.52
HDAC6-221ENST00000477561 PET117Q6UWS5 81 aa5.54□□□□□ -1.52
HDAC6-221ENST00000477561 C2orf66Q6UXQ4 117 aa5.54□□□□□ -1.52
HDAC6-221ENST00000477561 TOMM6Q96B49 74 aa5.54□□□□□ -1.52
HDAC6-221ENST00000477561 IFI27L1Q96BM0 104 aa5.54□□□□□ -1.52
HDAC6-221ENST00000477561 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.53□□□□□ -1.52
HDAC6-221ENST00000477561 SYS1-DBNDD2H3BUS1 97 aa5.53□□□□□ -1.52
HDAC6-221ENST00000477561 GHRHP01286 108 aa5.53□□□□□ -1.52
HDAC6-221ENST00000477561 SMAGPQ0VAQ4 97 aa5.53□□□□□ -1.52
HDAC6-221ENST00000477561 PYY3Q5JQD4 70 aa5.53□□□□□ -1.52
HDAC6-221ENST00000477561 TMEM141Q96I45 108 aa5.53□□□□□ -1.52
HDAC6-221ENST00000477561 SCGB3A1Q96QR1 104 aa5.53□□□□□ -1.52
HDAC6-221ENST00000477561 TMEM262E9PQX1 116 aa5.52□□□□□ -1.53
HDAC6-221ENST00000477561 Q6ZN92 141 aa5.52□□□□□ -1.53
HDAC6-221ENST00000477561 ERASQ7Z444 233 aa5.52□□□□□ -1.53
HDAC6-221ENST00000477561 LINC00518Q8N0U6 118 aa5.52□□□□□ -1.53
HDAC6-221ENST00000477561 C20orf203Q8NBC4 194 aa5.52□□□□□ -1.53
HDAC6-221ENST00000477561 TIMM17AQ99595 171 aa5.52□□□□□ -1.53
HDAC6-221ENST00000477561 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
HDAC6-221ENST00000477561 KLK12Q9UKR0 248 aa5.52□□□□□ -1.53
HDAC6-221ENST00000477561 A0A087WX48 190 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 TRBV6-8A0A0A6YYG3 113 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 LRCOL1A6NCL2 159 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 LECT2O14960 151 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 CDK2AP2O75956 126 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 PRSS1P07477 247 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 NPSP0C0P6 89 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 S100A12P80511 92 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 PAPPA-AS1Q5QFB9 102 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 LINC00173Q6ZV60 143 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 MAPKAPK5-AS1Q8N8E1 139 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 DEFB104AQ8WTQ1 72 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 UBE2WQ96B02 151 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 C12orf57Q99622 126 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 CHCHD7Q9BUK0 85 aa5.51□□□□□ -1.53
HDAC6-221ENST00000477561 TRBV25-1A0A075B6N4 114 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 TRAV8-3A0A0A6YYJ7 113 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 TRAV12-1A0A0B4J245 112 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 H0Y8G0 127 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 H7C423 109 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 UBE2L6O14933 153 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 KRTAP10-1P60331 282 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 WFDC2Q14508 124 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 LINC01545Q5VT33 79 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 NTM-AS1Q6ZSK4 140 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 CHCHD5Q9BSY4 110 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 TMEM243Q9BU79 118 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 TM2D2Q9BX73 214 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 SPANXA1Q9NS26 97 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 PYGO1Q9Y3Y4 419 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 ABCA13Q86UQ4 5058 aa5.5□□□□□ -1.53
HDAC6-221ENST00000477561 DNAH8Q96JB1 4490 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms