RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 IGHV1-58A0A0C4DH39 117 aa7.12□□□□□ -1.27
HDLBP-236ENST00000477477 LINC00959A0A1B0GUT2 108 aa7.12□□□□□ -1.27
HDLBP-236ENST00000477477 CCL25O15444 150 aa7.12□□□□□ -1.27
HDLBP-236ENST00000477477 TSHBP01222 138 aa7.12□□□□□ -1.27
HDLBP-236ENST00000477477 ESDP10768 282 aa7.12□□□□□ -1.27
HDLBP-236ENST00000477477 CT83Q5H943 113 aa7.12□□□□□ -1.27
HDLBP-236ENST00000477477 TMEM101Q96IK0 257 aa7.12□□□□□ -1.27
HDLBP-236ENST00000477477 TMEM242Q9NWH2 141 aa7.12□□□□□ -1.27
HDLBP-236ENST00000477477 TNXBP22105 4242 aa7.12□□□□□ -1.27
HDLBP-236ENST00000477477 GAS8-AS1O95177 125 aa7.11□□□□□ -1.27
HDLBP-236ENST00000477477 LYPD6BQ8NI32 183 aa7.11□□□□□ -1.27
HDLBP-236ENST00000477477 BORCS7Q96B45 105 aa7.11□□□□□ -1.27
HDLBP-236ENST00000477477 MRAP2Q96G30 205 aa7.11□□□□□ -1.27
HDLBP-236ENST00000477477 CARD19Q96LW7 228 aa7.11□□□□□ -1.27
HDLBP-236ENST00000477477 LINC00474Q9P2X8 69 aa7.11□□□□□ -1.27
HDLBP-236ENST00000477477 PKIGQ9Y2B9 76 aa7.11□□□□□ -1.27
HDLBP-236ENST00000477477 BLOC1S1P78537 153 aa7.1□□□□□ -1.27
HDLBP-236ENST00000477477 MRPL52Q86TS9 123 aaKnown RBP7.1□□□□□ -1.27
HDLBP-236ENST00000477477 LINC00526Q96FQ7 95 aa7.1□□□□□ -1.27
HDLBP-236ENST00000477477 LINC01600Q96MT4 127 aa7.1□□□□□ -1.27
HDLBP-236ENST00000477477 ST20Q9HBF5 79 aa7.1□□□□□ -1.27
HDLBP-236ENST00000477477 TRBV27A0A0K0K1C4 114 aa7.09□□□□□ -1.27
HDLBP-236ENST00000477477 A0A1B0GUT8 65 aa7.09□□□□□ -1.27
HDLBP-236ENST00000477477 HIGD1CA8MV81 97 aa7.09□□□□□ -1.27
HDLBP-236ENST00000477477 CEBPGP53567 150 aa7.09□□□□□ -1.27
HDLBP-236ENST00000477477 POLR2KP53803 58 aaKnown RBP7.09□□□□□ -1.27
HDLBP-236ENST00000477477 SS18Q15532 418 aa7.09□□□□□ -1.27
HDLBP-236ENST00000477477 CD164L2Q6UWJ8 174 aa7.09□□□□□ -1.27
HDLBP-236ENST00000477477 ALKAL2Q6UX46 152 aa7.09□□□□□ -1.27
HDLBP-236ENST00000477477 TSKUQ8WUA8 353 aa7.09□□□□□ -1.27
HDLBP-236ENST00000477477 TMEM191AQ9H0A3 160 aa7.09□□□□□ -1.27
HDLBP-236ENST00000477477 CDC42SE2Q9NRR3 84 aa7.09□□□□□ -1.27
HDLBP-236ENST00000477477 C7orf77A4D0Y5 90 aa7.08□□□□□ -1.28
HDLBP-236ENST00000477477 RAB4AP20338 218 aa7.08□□□□□ -1.28
HDLBP-236ENST00000477477 LINC01551Q86U37 167 aa7.08□□□□□ -1.28
HDLBP-236ENST00000477477 LINC00862A6NCI5 91 aa7.07□□□□□ -1.28
HDLBP-236ENST00000477477 ZNF561-AS1K7EIQ3 104 aa7.07□□□□□ -1.28
HDLBP-236ENST00000477477 SYCNQ0VAF6 134 aa7.07□□□□□ -1.28
HDLBP-236ENST00000477477 SPINK6Q6UWN8 80 aa7.07□□□□□ -1.28
HDLBP-236ENST00000477477 AMN1Q8IY45 258 aa7.07□□□□□ -1.28
HDLBP-236ENST00000477477 ZNF664Q8N3J9 261 aa7.07□□□□□ -1.28
HDLBP-236ENST00000477477 SMIM7Q9BQ49 75 aa7.07□□□□□ -1.28
HDLBP-236ENST00000477477 A0A0J9YXV3 536 aa7.06□□□□□ -1.28
HDLBP-236ENST00000477477 CAMPP49913 170 aa7.06□□□□□ -1.28
HDLBP-236ENST00000477477 PTTG1IPP53801 180 aa7.06□□□□□ -1.28
HDLBP-236ENST00000477477 OSTCQ9NRP0 149 aa7.06□□□□□ -1.28
HDLBP-236ENST00000477477 SMKR1H3BMG3 65 aa7.05□□□□□ -1.28
HDLBP-236ENST00000477477 FCER1GP30273 86 aa7.05□□□□□ -1.28
HDLBP-236ENST00000477477 ODF1Q14990 250 aa7.05□□□□□ -1.28
HDLBP-236ENST00000477477 REG3GQ6UW15 175 aa7.05□□□□□ -1.28
HDLBP-236ENST00000477477 Q6ZRP5 223 aa7.05□□□□□ -1.28
HDLBP-236ENST00000477477 ISOC2Q96AB3 205 aa7.05□□□□□ -1.28
HDLBP-236ENST00000477477 EIF5A2Q9GZV4 153 aaKnown RBP7.05□□□□□ -1.28
HDLBP-236ENST00000477477 CSDC2Q9Y534 153 aaKnown RBP7.05□□□□□ -1.28
HDLBP-236ENST00000477477 IGLV4-69A0A075B6H9 119 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 LOC107984640A0A0U1RRK4 108 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 ZNF727A8MUV8 499 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 C1orf196B1AJZ1 125 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 COX7A2LO14548 114 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 VCYO14598 125 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 MALP21145 153 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 KRTAP10-8P60410 259 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 RAB14P61106 215 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 SUMO2P61956 95 aaKnown RBP7.04□□□□□ -1.28
HDLBP-236ENST00000477477 SRSF9Q13242 221 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDLBP-236ENST00000477477 RIGQ13278 110 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 NRACQ8N912 160 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 UBE2D4Q9Y2X8 147 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 V9GYV3 84 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 RNF213Q63HN8 5207 aa7.04□□□□□ -1.28
HDLBP-236ENST00000477477 SNAPINO95295 136 aa7.03□□□□□ -1.28
HDLBP-236ENST00000477477 PPP1R17O96001 155 aa7.03□□□□□ -1.28
HDLBP-236ENST00000477477 SMAGPQ0VAQ4 97 aa7.03□□□□□ -1.28
HDLBP-236ENST00000477477 GAGE2BQ13066 116 aa7.03□□□□□ -1.28
HDLBP-236ENST00000477477 RNASE13Q5GAN3 156 aaKnown RBP7.03□□□□□ -1.28
HDLBP-236ENST00000477477 LINC00518Q8N0U6 118 aa7.03□□□□□ -1.28
HDLBP-236ENST00000477477 NUP35Q8NFH5 326 aa7.03□□□□□ -1.28
HDLBP-236ENST00000477477 KIR2DL4Q99706 377 aa7.03□□□□□ -1.28
HDLBP-236ENST00000477477 TRAV13-1A0A0B4J241 112 aa7.02□□□□□ -1.29
HDLBP-236ENST00000477477 A0A1W2PNN7 141 aa7.02□□□□□ -1.29
HDLBP-236ENST00000477477 APOMO95445 188 aa7.02□□□□□ -1.29
HDLBP-236ENST00000477477 SRP19P09132 144 aaKnown RBP7.02□□□□□ -1.29
HDLBP-236ENST00000477477 Q6ZUT4 128 aa7.02□□□□□ -1.29
HDLBP-236ENST00000477477 C2orf48Q96LS8 159 aa7.02□□□□□ -1.29
HDLBP-236ENST00000477477 CAMK2N2Q96S95 79 aa7.02□□□□□ -1.29
HDLBP-236ENST00000477477 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.01□□□□□ -1.29
HDLBP-236ENST00000477477 PPP1R2P9O14990 202 aa7.01□□□□□ -1.29
HDLBP-236ENST00000477477 TIMM21Q9BVV7 248 aa7.01□□□□□ -1.29
HDLBP-236ENST00000477477 NAT8BQ9UHF3 227 aa7.01□□□□□ -1.29
HDLBP-236ENST00000477477 SPAG11BQ08648 103 aa7□□□□□ -1.29
HDLBP-236ENST00000477477 MRPL51Q4U2R6 128 aaKnown RBP7□□□□□ -1.29
HDLBP-236ENST00000477477 C9orf116Q5BN46 136 aaPredicted RBP7□□□□□ -1.29
HDLBP-236ENST00000477477 CLLU1Q5K131 121 aa7□□□□□ -1.29
HDLBP-236ENST00000477477 FAM104BQ5XKR9 115 aa7□□□□□ -1.29
HDLBP-236ENST00000477477 C5orf38Q86SI9 138 aa7□□□□□ -1.29
HDLBP-236ENST00000477477 TMEM18Q96B42 140 aa7□□□□□ -1.29
HDLBP-236ENST00000477477 RPL23P62829 140 aaKnown RBP6.99□□□□□ -1.29
HDLBP-236ENST00000477477 RPL18AQ02543 176 aaKnown RBP6.99□□□□□ -1.29
HDLBP-236ENST00000477477 TMEM241Q24JQ0 296 aa6.99□□□□□ -1.29
HDLBP-236ENST00000477477 C20orf78Q9BR46 151 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms