RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 FAM110AQ9BQ89 295 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 IGHV4-4A0A075B6R2 117 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 TRBV27A0A0K0K1C4 114 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 GAGE2BQ13066 116 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 GAGE2EQ4V326 116 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 S100A7L2Q5SY68 101 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 PSMG3-AS1Q96PY0 264 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 GAGE2DQ9UEU5 116 aa8.13□□□□□ -1.11
COL27A1-204ENST00000477421 ASH1LQ9NR48 2969 aaKnown RBP8.13□□□□□ -1.11
COL27A1-204ENST00000477421 ZNF561-AS1K7EIQ3 104 aa8.12□□□□□ -1.11
COL27A1-204ENST00000477421 SCGB1A1P11684 91 aa8.12□□□□□ -1.11
COL27A1-204ENST00000477421 PPDPFLQ8WWR9 84 aa8.12□□□□□ -1.11
COL27A1-204ENST00000477421 TM2D2Q9BX73 214 aa8.12□□□□□ -1.11
COL27A1-204ENST00000477421 SOCS3O14543 225 aa8.12□□□□□ -1.11
COL27A1-204ENST00000477421 ZNF22P17026 224 aaPredicted RBP8.12□□□□□ -1.11
COL27A1-204ENST00000477421 COX8CQ7Z4L0 72 aa8.12□□□□□ -1.11
COL27A1-204ENST00000477421 TEP1Q99973 2627 aaKnown RBP8.12□□□□□ -1.11
COL27A1-204ENST00000477421 BRI3O95415 125 aa8.12□□□□□ -1.11
COL27A1-204ENST00000477421 DEFB121Q5J5C9 76 aa8.11□□□□□ -1.11
COL27A1-204ENST00000477421 CFAP126Q5VTH2 177 aa8.11□□□□□ -1.11
COL27A1-204ENST00000477421 NDUFA11Q86Y39 141 aa8.11□□□□□ -1.11
COL27A1-204ENST00000477421 CARD19Q96LW7 228 aa8.11□□□□□ -1.11
COL27A1-204ENST00000477421 ANAPC13Q9BS18 74 aa8.11□□□□□ -1.11
COL27A1-204ENST00000477421 C3orf56Q8N813 242 aa8.11□□□□□ -1.11
COL27A1-204ENST00000477421 LINC01006Q8NI28 216 aa8.11□□□□□ -1.11
COL27A1-204ENST00000477421 VSIG2Q96IQ7 327 aa8.11□□□□□ -1.11
COL27A1-204ENST00000477421 TSHBP01222 138 aa8.1□□□□□ -1.11
COL27A1-204ENST00000477421 HERV-K104P63124 156 aa8.1□□□□□ -1.11
COL27A1-204ENST00000477421 MAST4O15021 2626 aa8.1□□□□□ -1.11
COL27A1-204ENST00000477421 ODF3Q96PU9 254 aa8.1□□□□□ -1.11
COL27A1-204ENST00000477421 IGLV2-18A0A075B6J9 118 aa8.1□□□□□ -1.11
COL27A1-204ENST00000477421 LINC00482Q8N8I6 264 aa8.1□□□□□ -1.11
COL27A1-204ENST00000477421 CLEC2BQ92478 149 aa8.1□□□□□ -1.11
COL27A1-204ENST00000477421 IGHV1-58A0A0C4DH39 117 aa8.09□□□□□ -1.11
COL27A1-204ENST00000477421 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
COL27A1-204ENST00000477421 CRIP2P52943 208 aaPredicted RBP8.09□□□□□ -1.11
COL27A1-204ENST00000477421 TMEM263Q8WUH6 116 aaKnown RBP8.09□□□□□ -1.11
COL27A1-204ENST00000477421 UBE2WQ96B02 151 aa8.09□□□□□ -1.11
COL27A1-204ENST00000477421 C9orf85Q96MD7 179 aa8.09□□□□□ -1.11
COL27A1-204ENST00000477421 ZNF580Q9UK33 172 aa8.09□□□□□ -1.11
COL27A1-204ENST00000477421 SLC25A29Q8N8R3 303 aa8.09□□□□□ -1.11
COL27A1-204ENST00000477421 C16orf74Q96GX8 76 aa8.09□□□□□ -1.11
COL27A1-204ENST00000477421 ATP6V0E2Q8NHE4 81 aa8.09□□□□□ -1.11
COL27A1-204ENST00000477421 DNAJC30Q96LL9 226 aa8.09□□□□□ -1.11
COL27A1-204ENST00000477421 TEX15Q9BXT5 2789 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 RS1O15537 224 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 NDUFA7O95182 113 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 TCL1BO95988 128 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 RBX1P62877 108 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 DAZ2Q13117 558 aaKnown RBP8.08□□□□□ -1.12
COL27A1-204ENST00000477421 MRPL23Q16540 153 aaKnown RBP8.08□□□□□ -1.12
COL27A1-204ENST00000477421 ZFAND6Q6FIF0 208 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 GAGE2AQ6NT46 116 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 DAZ4Q86SG3 579 aaKnown RBP8.08□□□□□ -1.12
COL27A1-204ENST00000477421 DAZ3Q9NR90 486 aaKnown RBP8.08□□□□□ -1.12
COL27A1-204ENST00000477421 LOC100131303A0A0U1RQF7 123 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 SEC61GP60059 68 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 NFE4Q86UQ8 179 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 IGIPA6NJ69 53 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 ODF3L2Q3SX64 289 aa8.08□□□□□ -1.12
COL27A1-204ENST00000477421 INAFM1C9JVW0 142 aa8.07□□□□□ -1.12
COL27A1-204ENST00000477421 ANKRD29Q8N6D5 301 aa8.07□□□□□ -1.12
COL27A1-204ENST00000477421 ZANQ9Y493 2812 aa8.06□□□□□ -1.12
COL27A1-204ENST00000477421 TRBV6-5A0A0K0K1A5 114 aa8.06□□□□□ -1.12
COL27A1-204ENST00000477421 TMEM223A0PJW6 202 aa8.06□□□□□ -1.12
COL27A1-204ENST00000477421 G3V4G9 280 aa8.06□□□□□ -1.12
COL27A1-204ENST00000477421 LINC01620Q4KN68 170 aa8.06□□□□□ -1.12
COL27A1-204ENST00000477421 LRRC75A-AS1Q8N1F1 130 aa8.06□□□□□ -1.12
COL27A1-204ENST00000477421 Q9UF83 564 aa8.06□□□□□ -1.12
COL27A1-204ENST00000477421 ICOSQ9Y6W8 199 aa8.06□□□□□ -1.12
COL27A1-204ENST00000477421 DPH3Q96FX2 82 aa8.05□□□□□ -1.12
COL27A1-204ENST00000477421 TEN1Q86WV5 123 aa8.05□□□□□ -1.12
COL27A1-204ENST00000477421 SND1-IT1Q9HBX3 110 aa8.05□□□□□ -1.12
COL27A1-204ENST00000477421 INSL3P51460 131 aa8.05□□□□□ -1.12
COL27A1-204ENST00000477421 TSPEAR-AS2P59090 65 aa8.05□□□□□ -1.12
COL27A1-204ENST00000477421 MIR7-3HGQ8N6C7 128 aa8.05□□□□□ -1.12
COL27A1-204ENST00000477421 PLA2G2AP14555 144 aa8.04□□□□□ -1.12
COL27A1-204ENST00000477421 APOC4P55056 127 aa8.04□□□□□ -1.12
COL27A1-204ENST00000477421 FOXI1Q12951 378 aa8.04□□□□□ -1.12
COL27A1-204ENST00000477421 Q6ZSN1 163 aa8.04□□□□□ -1.12
COL27A1-204ENST00000477421 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
COL27A1-204ENST00000477421 MRAPQ8TCY5 172 aa8.03□□□□□ -1.12
COL27A1-204ENST00000477421 LAMTOR3Q9UHA4 124 aa8.03□□□□□ -1.12
COL27A1-204ENST00000477421 PIK3CD-AS1Q5SR53 167 aa8.03□□□□□ -1.12
COL27A1-204ENST00000477421 TINCRA0A1B0GVN0 87 aa8.03□□□□□ -1.12
COL27A1-204ENST00000477421 IGLV4-69A0A075B6H9 119 aa8.03□□□□□ -1.12
COL27A1-204ENST00000477421 TRBV10-1A0A0K0K1A3 114 aa8.03□□□□□ -1.12
COL27A1-204ENST00000477421 RBMY1FQ15415 496 aaKnown RBP8.03□□□□□ -1.12
COL27A1-204ENST00000477421 FAM222AQ5U5X8 452 aa8.03□□□□□ -1.12
COL27A1-204ENST00000477421 IGHV3-30P01768 117 aa8.02□□□□□ -1.13
COL27A1-204ENST00000477421 IGHV3-33P01772 117 aa8.02□□□□□ -1.13
COL27A1-204ENST00000477421 IGHV3-30-5P0DP03 117 aa8.02□□□□□ -1.13
COL27A1-204ENST00000477421 COX7B2Q8TF08 81 aa8.02□□□□□ -1.13
COL27A1-204ENST00000477421 NBEAL2Q6ZNJ1 2754 aa8.02□□□□□ -1.13
COL27A1-204ENST00000477421 M0QXV9 152 aa8.02□□□□□ -1.13
COL27A1-204ENST00000477421 HIST1H4AP62805 103 aaKnown RBP8.02□□□□□ -1.13
COL27A1-204ENST00000477421 SPANXB1Q9NS25 103 aaPredicted RBP8.02□□□□□ -1.13
COL27A1-204ENST00000477421 KIF25-AS1Q9Y6Z4 181 aa8.02□□□□□ -1.13
COL27A1-204ENST00000477421 UBR5O95071 2799 aaPredicted RBP8.01□□□□□ -1.13
COL27A1-204ENST00000477421 BAALC-AS2P0C853 105 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms