RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 RPL36AP83881 106 aaKnown RBP8.17□□□□□ -1.1
NUP188-205ENST00000477069 RPL36ALQ969Q0 106 aaKnown RBP8.17□□□□□ -1.1
NUP188-205ENST00000477069 RRN3P1Q2M238 152 aa8.17□□□□□ -1.1
NUP188-205ENST00000477069 SETD2Q9BYW2 2564 aaPredicted RBP8.17□□□□□ -1.1
NUP188-205ENST00000477069 NSD1Q96L73 2696 aaPredicted RBP8.16□□□□□ -1.1
NUP188-205ENST00000477069 IGHV3-64A0A075B6Q5 118 aa8.16□□□□□ -1.1
NUP188-205ENST00000477069 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
NUP188-205ENST00000477069 GAGE7O76087 117 aa8.16□□□□□ -1.1
NUP188-205ENST00000477069 GAGE12FP0CL80 117 aa8.16□□□□□ -1.1
NUP188-205ENST00000477069 GAGE12GP0CL81 117 aa8.16□□□□□ -1.1
NUP188-205ENST00000477069 GAGE12IP0CL82 117 aa8.16□□□□□ -1.1
NUP188-205ENST00000477069 LINC00694P0DN24 101 aa8.16□□□□□ -1.1
NUP188-205ENST00000477069 IGHV3-30-3P0DP02 117 aa8.16□□□□□ -1.1
NUP188-205ENST00000477069 C10orf126Q8N4M7 172 aa8.16□□□□□ -1.1
NUP188-205ENST00000477069 CSDC2Q9Y534 153 aaKnown RBP8.16□□□□□ -1.1
NUP188-205ENST00000477069 IGHV1-58A0A0C4DH39 117 aa8.16□□□□□ -1.1
NUP188-205ENST00000477069 SRSF9Q13242 221 aaKnown RBP eCLIP8.16□□□□□ -1.1
NUP188-205ENST00000477069 FAM19A3Q7Z5A8 133 aa8.16□□□□□ -1.1
NUP188-205ENST00000477069 TRBV6-4A0A1B0GX49 114 aa8.15□□□□□ -1.1
NUP188-205ENST00000477069 INSL3P51460 131 aa8.15□□□□□ -1.1
NUP188-205ENST00000477069 GTSF1LQ9H1H1 148 aa8.15□□□□□ -1.1
NUP188-205ENST00000477069 TRAV8-3A0A0A6YYJ7 113 aa8.14□□□□□ -1.11
NUP188-205ENST00000477069 GAGE12JA6NER3 117 aa8.14□□□□□ -1.11
NUP188-205ENST00000477069 TIRAPP58753 221 aa8.14□□□□□ -1.11
NUP188-205ENST00000477069 GAGE4Q13068 117 aa8.14□□□□□ -1.11
NUP188-205ENST00000477069 GAGE5Q13069 117 aa8.14□□□□□ -1.11
NUP188-205ENST00000477069 GAGE13Q4V321 117 aa8.14□□□□□ -1.11
NUP188-205ENST00000477069 LINC00612Q8N6U2 182 aa8.14□□□□□ -1.11
NUP188-205ENST00000477069 VSIG2Q96IQ7 327 aa8.14□□□□□ -1.11
NUP188-205ENST00000477069 VWFP04275 2813 aa8.14□□□□□ -1.11
NUP188-205ENST00000477069 TRGV2A0A075B6R0 118 aa8.14□□□□□ -1.11
NUP188-205ENST00000477069 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.14□□□□□ -1.11
NUP188-205ENST00000477069 JMJD1CQ15652 2540 aa8.14□□□□□ -1.11
NUP188-205ENST00000477069 A0A0J9YXY3 114 aa8.13□□□□□ -1.11
NUP188-205ENST00000477069 K7ERU9 68 aa8.13□□□□□ -1.11
NUP188-205ENST00000477069 FHL2Q14192 279 aa8.13□□□□□ -1.11
NUP188-205ENST00000477069 LITAFQ99732 161 aa8.13□□□□□ -1.11
NUP188-205ENST00000477069 CITED1Q99966 193 aa8.13□□□□□ -1.11
NUP188-205ENST00000477069 LOC100131303A0A0U1RQF7 123 aa8.13□□□□□ -1.11
NUP188-205ENST00000477069 CRLF1O75462 422 aa8.13□□□□□ -1.11
NUP188-205ENST00000477069 C9orf66Q5T8R8 295 aa8.13□□□□□ -1.11
NUP188-205ENST00000477069 X6R8D5 127 aa8.13□□□□□ -1.11
NUP188-205ENST00000477069 KIR2DL5BQ8NHK3 375 aa8.12□□□□□ -1.11
NUP188-205ENST00000477069 SPINK8P0C7L1 97 aa8.12□□□□□ -1.11
NUP188-205ENST00000477069 CFC1BP0CG36 223 aa8.12□□□□□ -1.11
NUP188-205ENST00000477069 CFC1P0CG37 223 aa8.12□□□□□ -1.11
NUP188-205ENST00000477069 COX6A2Q02221 97 aa8.12□□□□□ -1.11
NUP188-205ENST00000477069 LINC00242Q5T6M2 205 aa8.12□□□□□ -1.11
NUP188-205ENST00000477069 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
NUP188-205ENST00000477069 CDKN2A-AS1Q9UH64 79 aa8.12□□□□□ -1.11
NUP188-205ENST00000477069 CDC42SE2Q9NRR3 84 aa8.11□□□□□ -1.11
NUP188-205ENST00000477069 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
NUP188-205ENST00000477069 TSPAN13O95857 204 aa8.11□□□□□ -1.11
NUP188-205ENST00000477069 ZFAND6Q6FIF0 208 aa8.11□□□□□ -1.11
NUP188-205ENST00000477069 TENM1Q9UKZ4 2725 aa8.11□□□□□ -1.11
NUP188-205ENST00000477069 FN1P02751 2386 aaKnown RBP8.11□□□□□ -1.11
NUP188-205ENST00000477069 A8MZ25 164 aa8.1□□□□□ -1.11
NUP188-205ENST00000477069 DGAT2L7PQ6IED9 249 aa8.1□□□□□ -1.11
NUP188-205ENST00000477069 GEMIN7Q9H840 131 aaKnown RBP8.1□□□□□ -1.11
NUP188-205ENST00000477069 HIVEP1P15822 2718 aa8.1□□□□□ -1.11
NUP188-205ENST00000477069 TRGV4A0A0C4DH28 118 aa8.1□□□□□ -1.11
NUP188-205ENST00000477069 IGLV5-39A0A0G2JS06 123 aa8.09□□□□□ -1.11
NUP188-205ENST00000477069 H7C423 109 aa8.09□□□□□ -1.11
NUP188-205ENST00000477069 TMEM243Q9BU79 118 aa8.09□□□□□ -1.11
NUP188-205ENST00000477069 NDUFA12Q9UI09 145 aa8.09□□□□□ -1.11
NUP188-205ENST00000477069 SMIM9A6NGZ8 99 aa8.09□□□□□ -1.11
NUP188-205ENST00000477069 HERVK_113P63121 156 aa8.09□□□□□ -1.11
NUP188-205ENST00000477069 TMEM101Q96IK0 257 aa8.09□□□□□ -1.11
NUP188-205ENST00000477069 APOMO95445 188 aa8.09□□□□□ -1.12
NUP188-205ENST00000477069 MUSTN1Q8IVN3 82 aa8.09□□□□□ -1.12
NUP188-205ENST00000477069 SPANXDQ9BXN6 97 aa8.09□□□□□ -1.12
NUP188-205ENST00000477069 SPANXCQ9NY87 97 aa8.09□□□□□ -1.12
NUP188-205ENST00000477069 A4D1N5 150 aa8.08□□□□□ -1.12
NUP188-205ENST00000477069 SMAGPQ0VAQ4 97 aa8.08□□□□□ -1.12
NUP188-205ENST00000477069 C2CD3Q4AC94 2353 aa8.08□□□□□ -1.12
NUP188-205ENST00000477069 KRTAP21-3Q3LHN1 58 aa8.08□□□□□ -1.12
NUP188-205ENST00000477069 ADAMTSL4-AS1Q5T5F5 129 aa8.08□□□□□ -1.12
NUP188-205ENST00000477069 NOTCH3Q9UM47 2321 aa8.08□□□□□ -1.12
NUP188-205ENST00000477069 NDUFA1O15239 70 aa8.07□□□□□ -1.12
NUP188-205ENST00000477069 PRO0461Q9UI25 63 aa8.07□□□□□ -1.12
NUP188-205ENST00000477069 A0A0B4J2C4 111 aa8.07□□□□□ -1.12
NUP188-205ENST00000477069 F5H768 121 aa8.07□□□□□ -1.12
NUP188-205ENST00000477069 H3BMG7 143 aa8.07□□□□□ -1.12
NUP188-205ENST00000477069 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
NUP188-205ENST00000477069 SMIM1B2RUZ4 78 aa8.06□□□□□ -1.12
NUP188-205ENST00000477069 WIPF1O43516 503 aa8.06□□□□□ -1.12
NUP188-205ENST00000477069 TRBV6-8A0A0A6YYG3 113 aa8.06□□□□□ -1.12
NUP188-205ENST00000477069 UBE2L6O14933 153 aa8.06□□□□□ -1.12
NUP188-205ENST00000477069 TIMM17BO60830 172 aa8.06□□□□□ -1.12
NUP188-205ENST00000477069 PRO1854Q9UHT4 67 aa8.06□□□□□ -1.12
NUP188-205ENST00000477069 F8W1H4 67 aa8.06□□□□□ -1.12
NUP188-205ENST00000477069 DEFB130BP0DP73 79 aa8.06□□□□□ -1.12
NUP188-205ENST00000477069 DEFB130AP0DP74 79 aa8.06□□□□□ -1.12
NUP188-205ENST00000477069 WFDC9Q8NEX5 89 aa8.06□□□□□ -1.12
NUP188-205ENST00000477069 TRAV13-1A0A0B4J241 112 aa8.05□□□□□ -1.12
NUP188-205ENST00000477069 A0A1B0GV72 72 aa8.05□□□□□ -1.12
NUP188-205ENST00000477069 MIAQ16674 131 aa8.05□□□□□ -1.12
NUP188-205ENST00000477069 IGHV3-33P01772 117 aa8.04□□□□□ -1.12
NUP188-205ENST00000477069 IGLV4-60A0A075B6I1 120 aa8.03□□□□□ -1.12
NUP188-205ENST00000477069 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms