RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 SPAG11BQ08648 103 aa8.8□□□□□ -1
SMG5-204ENST00000476954 C5orf38Q86SI9 138 aa8.8□□□□□ -1
SMG5-204ENST00000476954 CDC42SE2Q9NRR3 84 aa8.8□□□□□ -1
SMG5-204ENST00000476954 MT1HP80294 61 aa8.79□□□□□ -1
SMG5-204ENST00000476954 LINC00304Q8N9R0 145 aa8.79□□□□□ -1
SMG5-204ENST00000476954 SCO2A0A1W2PP80 73 aa8.78□□□□□ -1
SMG5-204ENST00000476954 TSHBP01222 138 aa8.78□□□□□ -1
SMG5-204ENST00000476954 MZT2BQ6NZ67 158 aa8.78□□□□□ -1
SMG5-204ENST00000476954 G3V3Q6 166 aa8.77□□□□□ -1.01
SMG5-204ENST00000476954 TRGC1P0CF51 173 aa8.77□□□□□ -1.01
SMG5-204ENST00000476954 FHITP49789 147 aa8.77□□□□□ -1.01
SMG5-204ENST00000476954 IMMP2LQ96T52 175 aa8.77□□□□□ -1.01
SMG5-204ENST00000476954 MRPL35Q9NZE8 188 aaKnown RBP8.77□□□□□ -1.01
SMG5-204ENST00000476954 MAP1LC3B2A6NCE7 125 aa8.76□□□□□ -1.01
SMG5-204ENST00000476954 SDHAF1A6NFY7 115 aa8.76□□□□□ -1.01
SMG5-204ENST00000476954 PAGE4O60829 102 aa8.76□□□□□ -1.01
SMG5-204ENST00000476954 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
SMG5-204ENST00000476954 RNASE13Q5GAN3 156 aaKnown RBP8.76□□□□□ -1.01
SMG5-204ENST00000476954 LYZL1Q6UWQ5 148 aa8.76□□□□□ -1.01
SMG5-204ENST00000476954 TCEAL7Q9BRU2 100 aa8.76□□□□□ -1.01
SMG5-204ENST00000476954 MAP1LC3BQ9GZQ8 125 aa8.76□□□□□ -1.01
SMG5-204ENST00000476954 C6orf48Q9UBA6 75 aa8.76□□□□□ -1.01
SMG5-204ENST00000476954 TLX1NBP0CAT3 122 aa8.75□□□□□ -1.01
SMG5-204ENST00000476954 KRTAP19-2Q3LHN2 52 aa8.75□□□□□ -1.01
SMG5-204ENST00000476954 RPL7L1Q6DKI1 246 aaKnown RBP8.75□□□□□ -1.01
SMG5-204ENST00000476954 UNQ6190/PRO20217Q6UXQ8 127 aa8.75□□□□□ -1.01
SMG5-204ENST00000476954 CCDC32Q9BV29 185 aa8.75□□□□□ -1.01
SMG5-204ENST00000476954 CTDSP1Q9GZU7 261 aa8.75□□□□□ -1.01
SMG5-204ENST00000476954 SMDT1Q9H4I9 107 aa8.75□□□□□ -1.01
SMG5-204ENST00000476954 C1orf196B1AJZ1 125 aa8.74□□□□□ -1.01
SMG5-204ENST00000476954 SSNA1O43805 119 aa8.74□□□□□ -1.01
SMG5-204ENST00000476954 S100A9P06702 114 aaKnown RBP8.74□□□□□ -1.01
SMG5-204ENST00000476954 TMEM242Q9NWH2 141 aa8.74□□□□□ -1.01
SMG5-204ENST00000476954 PMCHP20382 165 aa8.73□□□□□ -1.01
SMG5-204ENST00000476954 C9orf129Q5T035 196 aaKnown RBP8.73□□□□□ -1.01
SMG5-204ENST00000476954 MRPL52Q86TS9 123 aaKnown RBP8.73□□□□□ -1.01
SMG5-204ENST00000476954 ALG5Q9Y673 324 aa8.73□□□□□ -1.01
SMG5-204ENST00000476954 TRAV13-1A0A0B4J241 112 aa8.72□□□□□ -1.01
SMG5-204ENST00000476954 I3L3M4 83 aa8.72□□□□□ -1.01
SMG5-204ENST00000476954 CFC1BP0CG36 223 aa8.72□□□□□ -1.01
SMG5-204ENST00000476954 FOXA3P55318 350 aaPredicted RBP8.72□□□□□ -1.01
SMG5-204ENST00000476954 KRTAP10-6P60371 365 aaPredicted RBP8.72□□□□□ -1.01
SMG5-204ENST00000476954 KRTAP13-3Q3SY46 172 aa8.72□□□□□ -1.01
SMG5-204ENST00000476954 LINC00337Q8N6G1 96 aa8.72□□□□□ -1.01
SMG5-204ENST00000476954 ENKURQ8TC29 256 aa8.72□□□□□ -1.01
SMG5-204ENST00000476954 ORAOV1Q8WV07 137 aa8.72□□□□□ -1.01
SMG5-204ENST00000476954 NDUFA1O15239 70 aa8.71□□□□□ -1.02
SMG5-204ENST00000476954 RPS20P60866 119 aaKnown RBP8.71□□□□□ -1.02
SMG5-204ENST00000476954 MRAP2Q96G30 205 aa8.71□□□□□ -1.02
SMG5-204ENST00000476954 RNASE7Q9H1E1 156 aaKnown RBP8.71□□□□□ -1.02
SMG5-204ENST00000476954 F2Z2F3 143 aa8.7□□□□□ -1.02
SMG5-204ENST00000476954 TWIST1Q15672 202 aa8.7□□□□□ -1.02
SMG5-204ENST00000476954 LINC00242Q5T6M2 205 aa8.7□□□□□ -1.02
SMG5-204ENST00000476954 TMUB2Q71RG4 321 aa8.7□□□□□ -1.02
SMG5-204ENST00000476954 OR10D4PQ8NGN7 298 aa8.7□□□□□ -1.02
SMG5-204ENST00000476954 AKR1C8PQ5T2L2 129 aa8.69□□□□□ -1.02
SMG5-204ENST00000476954 A0A1B0GV50 99 aa8.68□□□□□ -1.02
SMG5-204ENST00000476954 NUPR1O60356 82 aa8.68□□□□□ -1.02
SMG5-204ENST00000476954 IFNA1P01562 189 aa8.68□□□□□ -1.02
SMG5-204ENST00000476954 RPL35P42766 123 aaKnown RBP8.68□□□□□ -1.02
SMG5-204ENST00000476954 RPL28P46779 137 aaKnown RBP8.68□□□□□ -1.02
SMG5-204ENST00000476954 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
SMG5-204ENST00000476954 SSPOA2VEC9 5147 aa8.68□□□□□ -1.02
SMG5-204ENST00000476954 CTRLP40313 264 aa8.67□□□□□ -1.02
SMG5-204ENST00000476954 TMEM241Q24JQ0 296 aa8.67□□□□□ -1.02
SMG5-204ENST00000476954 C7orf77A4D0Y5 90 aa8.65□□□□□ -1.02
SMG5-204ENST00000476954 Q5BKY6 102 aa8.65□□□□□ -1.02
SMG5-204ENST00000476954 CENPWQ5EE01 88 aa8.65□□□□□ -1.02
SMG5-204ENST00000476954 Q6ZUT4 128 aa8.65□□□□□ -1.02
SMG5-204ENST00000476954 C9orf62Q8N4C0 152 aa8.65□□□□□ -1.02
SMG5-204ENST00000476954 C22orf24Q9Y442 160 aa8.65□□□□□ -1.02
SMG5-204ENST00000476954 TRBV6-5A0A0K0K1A5 114 aa8.64□□□□□ -1.03
SMG5-204ENST00000476954 F8WDY8 70 aa8.64□□□□□ -1.03
SMG5-204ENST00000476954 BCE1O60756 84 aa8.64□□□□□ -1.03
SMG5-204ENST00000476954 BORCS7-ASMTA0A0B4J1R7 106 aa8.63□□□□□ -1.03
SMG5-204ENST00000476954 PFDN1O60925 122 aa8.63□□□□□ -1.03
SMG5-204ENST00000476954 FAM229BQ4G0N7 80 aa8.63□□□□□ -1.03
SMG5-204ENST00000476954 MARVELD1Q9BSK0 173 aa8.63□□□□□ -1.03
SMG5-204ENST00000476954 CNFNQ9BYD5 112 aa8.63□□□□□ -1.03
SMG5-204ENST00000476954 UBE2D4Q9Y2X8 147 aa8.63□□□□□ -1.03
SMG5-204ENST00000476954 IGKV2D-26A0A0A0MRZ7 120 aa8.62□□□□□ -1.03
SMG5-204ENST00000476954 XKRY2A2RUG3 117 aa8.62□□□□□ -1.03
SMG5-204ENST00000476954 C2orf82Q6UX34 121 aa8.62□□□□□ -1.03
SMG5-204ENST00000476954 IGHV3OR16-9A0A0B4J2B5 98 aa8.61□□□□□ -1.03
SMG5-204ENST00000476954 RAB19A4D1S5 217 aa8.61□□□□□ -1.03
SMG5-204ENST00000476954 NDUFC2-KCTD14E9PQ53 114 aa8.61□□□□□ -1.03
SMG5-204ENST00000476954 KIAA0087Q14695 138 aa8.61□□□□□ -1.03
SMG5-204ENST00000476954 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
SMG5-204ENST00000476954 ST20Q9HBF5 79 aa8.61□□□□□ -1.03
SMG5-204ENST00000476954 USH2AO75445 5202 aa8.6□□□□□ -1.03
SMG5-204ENST00000476954 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
SMG5-204ENST00000476954 IFITM3Q01628 133 aa8.6□□□□□ -1.03
SMG5-204ENST00000476954 TEX261Q6UWH6 196 aa8.6□□□□□ -1.03
SMG5-204ENST00000476954 LINC00469Q8N7U9 141 aa8.6□□□□□ -1.03
SMG5-204ENST00000476954 SFT2D1Q8WV19 159 aa8.6□□□□□ -1.03
SMG5-204ENST00000476954 C3orf22Q8N5N4 141 aa8.59□□□□□ -1.03
SMG5-204ENST00000476954 CYTL1Q9NRR1 136 aa8.59□□□□□ -1.03
SMG5-204ENST00000476954 CSDC2Q9Y534 153 aaKnown RBP8.59□□□□□ -1.03
SMG5-204ENST00000476954 LBHQ53QV2 105 aaPredicted RBP8.58□□□□□ -1.04
SMG5-204ENST00000476954 KRTAP13-1Q8IUC0 172 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms