RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 CHCHD7Q9BUK0 85 aa7.95□□□□□ -1.14
C9orf3-214ENST00000473778 EDA2RQ9HAV5 297 aa7.95□□□□□ -1.14
C9orf3-214ENST00000473778 IGHV3-33P01772 117 aa7.94□□□□□ -1.14
C9orf3-214ENST00000473778 MRPS36P82909 103 aaKnown RBP7.94□□□□□ -1.14
C9orf3-214ENST00000473778 C11orf72Q8NBR9 251 aa7.94□□□□□ -1.14
C9orf3-214ENST00000473778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.93□□□□□ -1.14
C9orf3-214ENST00000473778 IGHV3-38A0A0C4DH36 116 aa7.93□□□□□ -1.14
C9orf3-214ENST00000473778 IGKV2-29A2NJV5 120 aaPredicted RBP7.93□□□□□ -1.14
C9orf3-214ENST00000473778 H7C2G1 150 aa7.93□□□□□ -1.14
C9orf3-214ENST00000473778 ADAMTSL4-AS1Q5T5F5 129 aa7.93□□□□□ -1.14
C9orf3-214ENST00000473778 PYGO1Q9Y3Y4 419 aa7.93□□□□□ -1.14
C9orf3-214ENST00000473778 SETXQ7Z333 2677 aaKnown RBP7.93□□□□□ -1.14
C9orf3-214ENST00000473778 SETD2Q9BYW2 2564 aaPredicted RBP7.93□□□□□ -1.14
C9orf3-214ENST00000473778 M0R2P5 195 aa7.93□□□□□ -1.14
C9orf3-214ENST00000473778 SLC25A20O43772 301 aa7.93□□□□□ -1.14
C9orf3-214ENST00000473778 BBC3Q96PG8 261 aaPredicted RBP7.93□□□□□ -1.14
C9orf3-214ENST00000473778 NOTCH3Q9UM47 2321 aa7.93□□□□□ -1.14
C9orf3-214ENST00000473778 ITPR3Q14573 2671 aa7.92□□□□□ -1.14
C9orf3-214ENST00000473778 C5orf47Q569G3 176 aa7.92□□□□□ -1.14
C9orf3-214ENST00000473778 MAP6D1Q9H9H5 199 aa7.92□□□□□ -1.14
C9orf3-214ENST00000473778 UBE2D4Q9Y2X8 147 aa7.92□□□□□ -1.14
C9orf3-214ENST00000473778 CSDC2Q9Y534 153 aaKnown RBP7.92□□□□□ -1.14
C9orf3-214ENST00000473778 Q6ZSV7 163 aa7.92□□□□□ -1.14
C9orf3-214ENST00000473778 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.92□□□□□ -1.14
C9orf3-214ENST00000473778 C15orf53Q8NAA6 179 aa7.92□□□□□ -1.14
C9orf3-214ENST00000473778 LINC00467Q9BRT7 94 aa7.92□□□□□ -1.14
C9orf3-214ENST00000473778 TIMM21Q9BVV7 248 aa7.92□□□□□ -1.14
C9orf3-214ENST00000473778 JMJD1CQ15652 2540 aa7.92□□□□□ -1.14
C9orf3-214ENST00000473778 C9JAW5 83 aa7.91□□□□□ -1.14
C9orf3-214ENST00000473778 TRAV8-4A0A0B4J246 113 aa7.91□□□□□ -1.14
C9orf3-214ENST00000473778 C2CD3Q4AC94 2353 aa7.9□□□□□ -1.14
C9orf3-214ENST00000473778 A0A0B4J2C4 111 aa7.9□□□□□ -1.14
C9orf3-214ENST00000473778 Q8N2B8 174 aa7.9□□□□□ -1.14
C9orf3-214ENST00000473778 C3orf56Q8N813 242 aa7.9□□□□□ -1.14
C9orf3-214ENST00000473778 IGHV1-58A0A0C4DH39 117 aa7.9□□□□□ -1.15
C9orf3-214ENST00000473778 KHDC1LQ5JSQ8 128 aa7.9□□□□□ -1.15
C9orf3-214ENST00000473778 NPC2P61916 151 aa7.89□□□□□ -1.15
C9orf3-214ENST00000473778 NTN5Q8WTR8 489 aaPredicted RBP7.89□□□□□ -1.15
C9orf3-214ENST00000473778 VSIG2Q96IQ7 327 aa7.89□□□□□ -1.15
C9orf3-214ENST00000473778 LINC01587Q99440 93 aa7.89□□□□□ -1.15
C9orf3-214ENST00000473778 CCDC168Q8NDH2 2452 aa7.89□□□□□ -1.15
C9orf3-214ENST00000473778 ZNF415Q09FC8 603 aa7.89□□□□□ -1.15
C9orf3-214ENST00000473778 DEFB114Q30KQ6 69 aa7.89□□□□□ -1.15
C9orf3-214ENST00000473778 NDUFA12Q9UI09 145 aa7.89□□□□□ -1.15
C9orf3-214ENST00000473778 IGHV3-53P01767 116 aa7.88□□□□□ -1.15
C9orf3-214ENST00000473778 C4orf3Q8WVX3 66 aa7.88□□□□□ -1.15
C9orf3-214ENST00000473778 DNAJC30Q96LL9 226 aa7.88□□□□□ -1.15
C9orf3-214ENST00000473778 CHCHD5Q9BSY4 110 aa7.88□□□□□ -1.15
C9orf3-214ENST00000473778 XCL2Q9UBD3 114 aa7.88□□□□□ -1.15
C9orf3-214ENST00000473778 GCN1Q92616 2671 aaKnown RBP7.88□□□□□ -1.15
C9orf3-214ENST00000473778 TINCRA0A1B0GVN0 87 aa7.88□□□□□ -1.15
C9orf3-214ENST00000473778 TRIAP1O43715 76 aa7.88□□□□□ -1.15
C9orf3-214ENST00000473778 ODF3L2Q3SX64 289 aa7.88□□□□□ -1.15
C9orf3-214ENST00000473778 DAND5Q8N907 189 aa7.88□□□□□ -1.15
C9orf3-214ENST00000473778 CDKN2A-AS1Q9UH64 79 aa7.88□□□□□ -1.15
C9orf3-214ENST00000473778 FLNAP21333 2647 aaKnown RBP7.87□□□□□ -1.15
C9orf3-214ENST00000473778 NDUFA7O95182 113 aa7.87□□□□□ -1.15
C9orf3-214ENST00000473778 PRSS2P07478 247 aa7.87□□□□□ -1.15
C9orf3-214ENST00000473778 COX6A2Q02221 97 aa7.87□□□□□ -1.15
C9orf3-214ENST00000473778 BEAN1Q3B7T3 259 aa7.87□□□□□ -1.15
C9orf3-214ENST00000473778 C11orf44Q8N8P7 122 aa7.87□□□□□ -1.15
C9orf3-214ENST00000473778 LINC00694P0DN24 101 aa7.86□□□□□ -1.15
C9orf3-214ENST00000473778 PIK3CD-AS1Q5SR53 167 aa7.86□□□□□ -1.15
C9orf3-214ENST00000473778 KRTAP1-3Q8IUG1 177 aa7.86□□□□□ -1.15
C9orf3-214ENST00000473778 IGHV3OR16-12A0A075B7B8 117 aa7.86□□□□□ -1.15
C9orf3-214ENST00000473778 Q1RN00 199 aa7.86□□□□□ -1.15
C9orf3-214ENST00000473778 C1orf158Q8N1D5 194 aa7.86□□□□□ -1.15
C9orf3-214ENST00000473778 DYNLRB2Q8TF09 96 aa7.86□□□□□ -1.15
C9orf3-214ENST00000473778 PEMTQ9UBM1 199 aa7.86□□□□□ -1.15
C9orf3-214ENST00000473778 MRPL23Q16540 153 aaKnown RBP7.85□□□□□ -1.15
C9orf3-214ENST00000473778 Q96MF0 132 aa7.85□□□□□ -1.15
C9orf3-214ENST00000473778 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.85□□□□□ -1.15
C9orf3-214ENST00000473778 TEX49A0A1B0GTD5 131 aa7.85□□□□□ -1.15
C9orf3-214ENST00000473778 RS1O15537 224 aa7.85□□□□□ -1.15
C9orf3-214ENST00000473778 RPL13AP40429 203 aaKnown RBP7.85□□□□□ -1.15
C9orf3-214ENST00000473778 SPANXDQ9BXN6 97 aa7.85□□□□□ -1.15
C9orf3-214ENST00000473778 SPANXCQ9NY87 97 aa7.85□□□□□ -1.15
C9orf3-214ENST00000473778 SMIM9A6NGZ8 99 aa7.84□□□□□ -1.15
C9orf3-214ENST00000473778 INSP01308 110 aa7.84□□□□□ -1.15
C9orf3-214ENST00000473778 A0A1W2PRX2 142 aa7.84□□□□□ -1.15
C9orf3-214ENST00000473778 MIAQ16674 131 aa7.84□□□□□ -1.15
C9orf3-214ENST00000473778 DEFB113Q30KQ7 82 aa7.84□□□□□ -1.15
C9orf3-214ENST00000473778 LINC01620Q4KN68 170 aa7.84□□□□□ -1.15
C9orf3-214ENST00000473778 UBE2WQ96B02 151 aa7.84□□□□□ -1.15
C9orf3-214ENST00000473778 TMEM101Q96IK0 257 aa7.84□□□□□ -1.15
C9orf3-214ENST00000473778 TRBV30A0A0K0K1B3 111 aa7.83□□□□□ -1.16
C9orf3-214ENST00000473778 NTM-AS1Q6ZSK4 140 aa7.83□□□□□ -1.16
C9orf3-214ENST00000473778 IL17DQ8TAD2 202 aa7.83□□□□□ -1.16
C9orf3-214ENST00000473778 ACANP16112 2415 aa7.83□□□□□ -1.16
C9orf3-214ENST00000473778 FLNBO75369 2602 aaKnown RBP7.83□□□□□ -1.16
C9orf3-214ENST00000473778 IGLV5-45A0A087WSX0 123 aa7.83□□□□□ -1.16
C9orf3-214ENST00000473778 LOC107984640A0A0U1RRK4 108 aa7.83□□□□□ -1.16
C9orf3-214ENST00000473778 ATXN8Q156A1 80 aa7.83□□□□□ -1.16
C9orf3-214ENST00000473778 HELZ2Q9BYK8 2649 aaKnown RBP7.83□□□□□ -1.16
C9orf3-214ENST00000473778 TENM4Q6N022 2769 aa7.82□□□□□ -1.16
C9orf3-214ENST00000473778 LINC00242Q5T6M2 205 aa7.82□□□□□ -1.16
C9orf3-214ENST00000473778 Q6ZTI0 123 aa7.82□□□□□ -1.16
C9orf3-214ENST00000473778 CLEC2BQ92478 149 aa7.82□□□□□ -1.16
C9orf3-214ENST00000473778 ICOSQ9Y6W8 199 aa7.82□□□□□ -1.16
C9orf3-214ENST00000473778 TRGV1A0A0A0MS02 117 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms