RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 K7EP13 123 aa8.77□□□□□ -1.01
TPM3-216ENST00000473036 IFI27P40305 119 aaPredicted RBP8.77□□□□□ -1.01
TPM3-216ENST00000473036 IQCJQ1A5X6 159 aa8.77□□□□□ -1.01
TPM3-216ENST00000473036 HSBP1O75506 76 aa8.76□□□□□ -1.01
TPM3-216ENST00000473036 AMTP48728 403 aa8.76□□□□□ -1.01
TPM3-216ENST00000473036 MPV17L2Q567V2 206 aa8.76□□□□□ -1.01
TPM3-216ENST00000473036 COA6Q5JTJ3 125 aaKnown RBP8.76□□□□□ -1.01
TPM3-216ENST00000473036 HERC1Q15751 4861 aa8.75□□□□□ -1.01
TPM3-216ENST00000473036 UBE2L6O14933 153 aa8.75□□□□□ -1.01
TPM3-216ENST00000473036 TSHBP01222 138 aa8.75□□□□□ -1.01
TPM3-216ENST00000473036 FUSP35637 526 aaKnown RBP eCLIP8.75□□□□□ -1.01
TPM3-216ENST00000473036 C10orf126Q8N4M7 172 aa8.75□□□□□ -1.01
TPM3-216ENST00000473036 TMEM243Q9BU79 118 aa8.75□□□□□ -1.01
TPM3-216ENST00000473036 Q9HAA7 133 aa8.75□□□□□ -1.01
TPM3-216ENST00000473036 NPSP0C0P6 89 aa8.74□□□□□ -1.01
TPM3-216ENST00000473036 KRTAP10-2P60368 255 aa8.74□□□□□ -1.01
TPM3-216ENST00000473036 GAGE6Q13070 117 aa8.74□□□□□ -1.01
TPM3-216ENST00000473036 PAPPA-AS1Q5QFB9 102 aa8.74□□□□□ -1.01
TPM3-216ENST00000473036 RNASEKQ6P5S7 137 aaKnown RBP8.74□□□□□ -1.01
TPM3-216ENST00000473036 Q8N976 141 aa8.74□□□□□ -1.01
TPM3-216ENST00000473036 CHCHD7Q9BUK0 85 aa8.74□□□□□ -1.01
TPM3-216ENST00000473036 CYSLTR1Q9Y271 337 aa8.74□□□□□ -1.01
TPM3-216ENST00000473036 VPS13BQ7Z7G8 4022 aa8.73□□□□□ -1.01
TPM3-216ENST00000473036 LRCOL1A6NCL2 159 aa8.73□□□□□ -1.01
TPM3-216ENST00000473036 ESDP10768 282 aa8.73□□□□□ -1.01
TPM3-216ENST00000473036 ZNF25P17030 456 aaPredicted RBP8.73□□□□□ -1.01
TPM3-216ENST00000473036 NDUFA6P56556 154 aa8.73□□□□□ -1.01
TPM3-216ENST00000473036 C20orf203Q8NBC4 194 aa8.73□□□□□ -1.01
TPM3-216ENST00000473036 TMEM101Q96IK0 257 aa8.73□□□□□ -1.01
TPM3-216ENST00000473036 CHCHD5Q9BSY4 110 aa8.73□□□□□ -1.01
TPM3-216ENST00000473036 KLK12Q9UKR0 248 aa8.73□□□□□ -1.01
TPM3-216ENST00000473036 TMEM262E9PQX1 116 aa8.72□□□□□ -1.01
TPM3-216ENST00000473036 HBDP02042 147 aa8.72□□□□□ -1.01
TPM3-216ENST00000473036 WFDC2Q14508 124 aa8.72□□□□□ -1.01
TPM3-216ENST00000473036 DGAT2L7PQ6IED9 249 aa8.72□□□□□ -1.01
TPM3-216ENST00000473036 ENHOQ6UWT2 76 aa8.72□□□□□ -1.01
TPM3-216ENST00000473036 NFE4Q86UQ8 179 aa8.72□□□□□ -1.01
TPM3-216ENST00000473036 PACRGQ96M98 296 aaPredicted RBP8.72□□□□□ -1.01
TPM3-216ENST00000473036 TIMM21Q9BVV7 248 aa8.72□□□□□ -1.01
TPM3-216ENST00000473036 CSDC2Q9Y534 153 aaKnown RBP8.72□□□□□ -1.01
TPM3-216ENST00000473036 DMBT1Q9UGM3 2413 aaPredicted RBP8.71□□□□□ -1.01
TPM3-216ENST00000473036 A0A087WTM6 91 aa8.71□□□□□ -1.02
TPM3-216ENST00000473036 A0A087WX48 190 aa8.71□□□□□ -1.02
TPM3-216ENST00000473036 A0A1B0GUV1 79 aa8.71□□□□□ -1.02
TPM3-216ENST00000473036 SERF1AO75920 110 aa8.71□□□□□ -1.02
TPM3-216ENST00000473036 RBX1P62877 108 aa8.71□□□□□ -1.02
TPM3-216ENST00000473036 AMMECR1LQ6DCA0 310 aa8.71□□□□□ -1.02
TPM3-216ENST00000473036 MRPL52Q86TS9 123 aaKnown RBP8.71□□□□□ -1.02
TPM3-216ENST00000473036 SPANXA1Q9NS26 97 aa8.71□□□□□ -1.02
TPM3-216ENST00000473036 PYGO1Q9Y3Y4 419 aa8.71□□□□□ -1.02
TPM3-216ENST00000473036 IGLV4-60A0A075B6I1 120 aa8.7□□□□□ -1.02
TPM3-216ENST00000473036 ATP5LO75964 103 aa8.7□□□□□ -1.02
TPM3-216ENST00000473036 C2orf66Q6UXQ4 117 aa8.7□□□□□ -1.02
TPM3-216ENST00000473036 SPATA12Q7Z6I5 190 aa8.7□□□□□ -1.02
TPM3-216ENST00000473036 UBE2WQ96B02 151 aa8.7□□□□□ -1.02
TPM3-216ENST00000473036 TOMM6Q96B49 74 aa8.7□□□□□ -1.02
TPM3-216ENST00000473036 TMEM141Q96I45 108 aa8.7□□□□□ -1.02
TPM3-216ENST00000473036 S100A2P29034 98 aa8.69□□□□□ -1.02
TPM3-216ENST00000473036 ERASQ7Z444 233 aa8.69□□□□□ -1.02
TPM3-216ENST00000473036 HSPB8Q9UJY1 196 aa8.69□□□□□ -1.02
TPM3-216ENST00000473036 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.68□□□□□ -1.02
TPM3-216ENST00000473036 IGKV2-29A2NJV5 120 aaPredicted RBP8.68□□□□□ -1.02
TPM3-216ENST00000473036 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.68□□□□□ -1.02
TPM3-216ENST00000473036 KRTAP26-1Q6PEX3 210 aa8.68□□□□□ -1.02
TPM3-216ENST00000473036 CLPSL2Q6UWE3 100 aa8.68□□□□□ -1.02
TPM3-216ENST00000473036 Q6ZN92 141 aa8.68□□□□□ -1.02
TPM3-216ENST00000473036 OR5A1Q8NGJ0 315 aa8.68□□□□□ -1.02
TPM3-216ENST00000473036 URB1-AS1Q96HZ7 61 aa8.68□□□□□ -1.02
TPM3-216ENST00000473036 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
TPM3-216ENST00000473036 TIMM17AQ99595 171 aa8.68□□□□□ -1.02
TPM3-216ENST00000473036 PRR34Q9NV39 138 aa8.68□□□□□ -1.02
TPM3-216ENST00000473036 TRAV8-3A0A0A6YYJ7 113 aa8.67□□□□□ -1.02
TPM3-216ENST00000473036 CCL25O15444 150 aa8.67□□□□□ -1.02
TPM3-216ENST00000473036 LEPROTL1O95214 131 aa8.67□□□□□ -1.02
TPM3-216ENST00000473036 ANGP03950 147 aaKnown RBP8.67□□□□□ -1.02
TPM3-216ENST00000473036 FGF6P10767 208 aa8.67□□□□□ -1.02
TPM3-216ENST00000473036 MRPS36P82909 103 aaKnown RBP8.67□□□□□ -1.02
TPM3-216ENST00000473036 LINC00269Q8N2A0 174 aa8.67□□□□□ -1.02
TPM3-216ENST00000473036 AKR1D1P51857 326 aa8.66□□□□□ -1.02
TPM3-216ENST00000473036 IGKV2D-24A0A075B6R9 120 aa8.65□□□□□ -1.02
TPM3-216ENST00000473036 C5orf52A6NGY3 159 aa8.65□□□□□ -1.02
TPM3-216ENST00000473036 LECT2O14960 151 aa8.65□□□□□ -1.02
TPM3-216ENST00000473036 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.02
TPM3-216ENST00000473036 BAALCQ8WXS3 180 aa8.65□□□□□ -1.02
TPM3-216ENST00000473036 VCX2Q9H322 139 aa8.65□□□□□ -1.02
TPM3-216ENST00000473036 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.02
TPM3-216ENST00000473036 IGIPA6NJ69 53 aa8.64□□□□□ -1.03
TPM3-216ENST00000473036 PSCAO43653 123 aa8.64□□□□□ -1.03
TPM3-216ENST00000473036 SNRPEP62304 92 aaKnown RBP8.64□□□□□ -1.03
TPM3-216ENST00000473036 ZNF664Q8N3J9 261 aa8.64□□□□□ -1.03
TPM3-216ENST00000473036 C2orf88Q9BSF0 95 aa8.64□□□□□ -1.03
TPM3-216ENST00000473036 LINC00310P59036 64 aa8.63□□□□□ -1.03
TPM3-216ENST00000473036 RPL39P62891 51 aaKnown RBP8.63□□□□□ -1.03
TPM3-216ENST00000473036 SEC11AP67812 179 aa8.63□□□□□ -1.03
TPM3-216ENST00000473036 REG3AQ06141 175 aa8.63□□□□□ -1.03
TPM3-216ENST00000473036 TEX43Q6ZNM6 134 aa8.63□□□□□ -1.03
TPM3-216ENST00000473036 FAM19A2Q8N3H0 131 aa8.63□□□□□ -1.03
TPM3-216ENST00000473036 Q8N814 137 aa8.63□□□□□ -1.03
TPM3-216ENST00000473036 TM2D2Q9BX73 214 aa8.63□□□□□ -1.03
TPM3-216ENST00000473036 MAP1LC3CQ9BXW4 147 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms