RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 ARPC4P59998 168 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 UBA52P62987 128 aaKnown RBP-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 COX17Q14061 63 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 KRTAP20-2Q3LI61 65 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 MEIG1Q5JSS6 88 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 Q6AWC8 147 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 SCIMPQ6UWF3 145 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 Q8N8P6 123 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 LCN9Q8WX39 176 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 DPH3Q96FX2 82 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 AMELXQ99217 191 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 PFDN5Q99471 154 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 LINC00472Q9H8W2 130 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 SPANXCQ9NY87 97 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 CRIPTQ9P021 101 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 LENEPQ9Y5L5 61 aa-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 EP300Q09472 2414 aaPredicted RBP-0.22□□□□□ -2.44
NCKAP1-203ENST00000471640 HIVEP1P15822 2718 aa-0.22□□□□□ -2.45
NCKAP1-203ENST00000471640 POLA1P09884 1462 aaPredicted RBP-0.22□□□□□ -2.45
NCKAP1-203ENST00000471640 IFT140Q96RY7 1462 aa-0.22□□□□□ -2.45
NCKAP1-203ENST00000471640 SPTBN1Q01082 2364 aaKnown RBP-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 LRP1BQ9NZR2 4599 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 TRANK1O15050 2925 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 TACC2O95359 2948 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 CHD8Q9HCK8 2581 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 HECTD1Q9ULT8 2610 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 ZFHX3Q15911 3703 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 TRBV7-3A0A075B6L6 115 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 LINC00959A0A1B0GUT2 108 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 SPAARA0A1B0GVQ0 90 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 SPINK4O60575 86 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 SFT2D2O95562 160 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 NCR2O95944 276 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 IGLC1P0CG04 106 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 DR1Q01658 176 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 KRTAP6-2Q3LI66 62 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 C10orf113Q5VZT2 155 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 MRPL54Q6P161 138 aaKnown RBP-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 TCEAL4Q96EI5 215 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 LINC01600Q96MT4 127 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 FAM107BQ9H098 131 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 TMEM191AQ9H0A3 160 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 DYNLRB1Q9NP97 96 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 SPANXA1Q9NS26 97 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 LINC00474Q9P2X8 69 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 LINC01558Q9Y6Z2 57 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 ARL2-SNX15V9GYD0 113 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 ARFGEF1Q9Y6D6 1849 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 SPTA1P02549 2419 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 PRKDCP78527 4128 aaKnown RBP-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 PPIP5K1Q6PFW1 1433 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 NSD3Q9BZ95 1437 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 EPG5Q9HCE0 2579 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 HMGXB3Q12766 1538 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 ARHGEF12Q9NZN5 1544 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 ADGRB1O14514 1584 aa-0.23□□□□□ -2.45
NCKAP1-203ENST00000471640 WDR87Q6ZQQ6 2873 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 LRRC37A3O60309 1634 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 PAPPAQ13219 1627 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 ARAP2Q8WZ64 1704 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 ZNF236Q9UL36 1845 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 USP9YO00507 2555 aaPredicted RBP-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 PLXNA2O75051 1894 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 ITPR3Q14573 2671 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 MYH9P35579 1960 aaKnown RBP-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 PIGBOS1A0A0B4J2F0 54 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 CPSF4LA6NMK7 179 aaKnown RBP-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 TPPP2P59282 170 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 CATR1Q13166 79 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 ALX1Q15699 326 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 DEFB135Q30KP9 77 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 FAM223AQ8IWN6 122 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 ARL11Q969Q4 196 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 MGST2Q99735 147 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 MANBALQ9NQG1 85 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 FAIMQ9NVQ4 179 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 CCDC167Q9P0B6 97 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 SERP1Q9Y6X1 66 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 HERC1Q15751 4861 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 REV3LO60673 3130 aa-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 CNOT1A5YKK6 2376 aaKnown RBP-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 XIRP1Q702N8 1843 aaKnown RBP-0.24□□□□□ -2.45
NCKAP1-203ENST00000471640 DOCK11Q5JSL3 2073 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 WNK1Q9H4A3 2382 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 TRBV7-4A0A0J9YYF1 115 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 LOC100130705A0A1B0GUX0 176 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 LOC105371267A0A1B0GV96 52 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 OOSP1A8MZH6 123 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 MGPP08493 103 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 GNG11P61952 73 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 H1FX-AS1Q4G0G2 97 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 Q56UQ5 140 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 C12orf73Q69YU5 71 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 DEFB123Q8N688 67 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 COPS9Q8WXC6 57 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 PPP3R2Q96LZ3 170 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 NAA60Q9H7X0 242 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 NXT2Q9NPJ8 142 aaKnown RBP-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 UQCR10Q9UDW1 63 aa-0.25□□□□□ -2.45
NCKAP1-203ENST00000471640 CPSF1Q10570 1443 aaKnown RBP-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms