RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 DAD1P61803 113 aa12.28□□□□□ -0.44
HSPG2-208ENST00000471322 TENM2Q9NT68 2774 aa12.28□□□□□ -0.44
HSPG2-208ENST00000471322 NMUP48645 174 aa12.27□□□□□ -0.44
HSPG2-208ENST00000471322 ZFAND6Q6FIF0 208 aa12.27□□□□□ -0.44
HSPG2-208ENST00000471322 BOD1L2Q8IYS8 172 aa12.27□□□□□ -0.44
HSPG2-208ENST00000471322 MUC7Q8TAX7 377 aa12.27□□□□□ -0.44
HSPG2-208ENST00000471322 AMELXQ99217 191 aa12.27□□□□□ -0.44
HSPG2-208ENST00000471322 IGLV4-69A0A075B6H9 119 aa12.26□□□□□ -0.45
HSPG2-208ENST00000471322 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-208ENST00000471322 IGKV2-29A2NJV5 120 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-208ENST00000471322 MRPS36P82909 103 aaKnown RBP12.26□□□□□ -0.45
HSPG2-208ENST00000471322 OPRPNQ99935 248 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-208ENST00000471322 H7C423 109 aa12.26□□□□□ -0.45
HSPG2-208ENST00000471322 LINC00694P0DN24 101 aa12.26□□□□□ -0.45
HSPG2-208ENST00000471322 DGAT2L7PQ6IED9 249 aa12.26□□□□□ -0.45
HSPG2-208ENST00000471322 NFE4Q86UQ8 179 aa12.26□□□□□ -0.45
HSPG2-208ENST00000471322 CSDC2Q9Y534 153 aaKnown RBP12.26□□□□□ -0.45
HSPG2-208ENST00000471322 LOC100131303A0A0U1RQF7 123 aa12.25□□□□□ -0.45
HSPG2-208ENST00000471322 SIVA1O15304 175 aa12.25□□□□□ -0.45
HSPG2-208ENST00000471322 FGF6P10767 208 aa12.25□□□□□ -0.45
HSPG2-208ENST00000471322 HERVK_113P61574 105 aa12.25□□□□□ -0.45
HSPG2-208ENST00000471322 NTM-AS1Q6ZSK4 140 aa12.25□□□□□ -0.45
HSPG2-208ENST00000471322 TMEM243Q9BU79 118 aa12.25□□□□□ -0.45
HSPG2-208ENST00000471322 TRBV25-1A0A075B6N4 114 aa12.24□□□□□ -0.45
HSPG2-208ENST00000471322 C11orf86A6NJI1 115 aa12.24□□□□□ -0.45
HSPG2-208ENST00000471322 ATP5G1P05496 136 aa12.24□□□□□ -0.45
HSPG2-208ENST00000471322 C2orf88Q9BSF0 95 aa12.24□□□□□ -0.45
HSPG2-208ENST00000471322 SNHG12Q9BXW3 62 aa12.23□□□□□ -0.45
HSPG2-208ENST00000471322 UBE2L6O14933 153 aa12.22□□□□□ -0.45
HSPG2-208ENST00000471322 PAX4O43316 350 aa12.22□□□□□ -0.45
HSPG2-208ENST00000471322 GYPEP15421 78 aa12.22□□□□□ -0.45
HSPG2-208ENST00000471322 FAM104AQ969W3 186 aa12.22□□□□□ -0.45
HSPG2-208ENST00000471322 IGKV2D-26A0A0A0MRZ7 120 aa12.22□□□□□ -0.45
HSPG2-208ENST00000471322 E9PLD3 99 aa12.22□□□□□ -0.45
HSPG2-208ENST00000471322 TCTAP57738 103 aa12.22□□□□□ -0.45
HSPG2-208ENST00000471322 CEMP1Q6PRD7 247 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-208ENST00000471322 PCP2Q8IVA1 136 aa12.22□□□□□ -0.45
HSPG2-208ENST00000471322 ATP6V0E2Q8NHE4 81 aa12.22□□□□□ -0.45
HSPG2-208ENST00000471322 CHAC1Q9BUX1 264 aa12.21□□□□□ -0.46
HSPG2-208ENST00000471322 CELA1Q9UNI1 258 aa12.21□□□□□ -0.46
HSPG2-208ENST00000471322 PLECQ15149 4684 aaKnown RBP12.2□□□□□ -0.46
HSPG2-208ENST00000471322 TRBV6-8A0A0A6YYG3 113 aa12.2□□□□□ -0.46
HSPG2-208ENST00000471322 CASC10Q5T4H9 136 aa12.2□□□□□ -0.46
HSPG2-208ENST00000471322 TMEM170BQ5T4T1 132 aa12.2□□□□□ -0.46
HSPG2-208ENST00000471322 TMEM101Q96IK0 257 aa12.2□□□□□ -0.46
HSPG2-208ENST00000471322 EREGO14944 169 aa12.19□□□□□ -0.46
HSPG2-208ENST00000471322 ZNF25P17030 456 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-208ENST00000471322 NANOS2P60321 138 aaKnown RBP12.19□□□□□ -0.46
HSPG2-208ENST00000471322 AMMECR1LQ6DCA0 310 aa12.19□□□□□ -0.46
HSPG2-208ENST00000471322 Q6ZUT4 128 aa12.19□□□□□ -0.46
HSPG2-208ENST00000471322 OR5A1Q8NGJ0 315 aa12.19□□□□□ -0.46
HSPG2-208ENST00000471322 C11orf68Q9H3H3 251 aaKnown RBP12.19□□□□□ -0.46
HSPG2-208ENST00000471322 A0A0J9YXV3 536 aa12.19□□□□□ -0.46
HSPG2-208ENST00000471322 C3orf84H3BNL1 204 aa12.19□□□□□ -0.46
HSPG2-208ENST00000471322 C2orf91Q6ZV80 131 aa12.19□□□□□ -0.46
HSPG2-208ENST00000471322 TRAV8-6A0A0B4J262 113 aa12.18□□□□□ -0.46
HSPG2-208ENST00000471322 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
HSPG2-208ENST00000471322 HIGD1BQ9P298 99 aa12.18□□□□□ -0.46
HSPG2-208ENST00000471322 F5H768 121 aa12.17□□□□□ -0.46
HSPG2-208ENST00000471322 SH2D6Q7Z4S9 175 aa12.17□□□□□ -0.46
HSPG2-208ENST00000471322 C11orf45Q8TAV5 145 aa12.17□□□□□ -0.46
HSPG2-208ENST00000471322 TP73-AS1Q9UF72 201 aa12.17□□□□□ -0.46
HSPG2-208ENST00000471322 TRAV26-1A0A087WT03 109 aa12.16□□□□□ -0.46
HSPG2-208ENST00000471322 SEC11AP67812 179 aa12.16□□□□□ -0.46
HSPG2-208ENST00000471322 BATFQ16520 125 aa12.16□□□□□ -0.46
HSPG2-208ENST00000471322 VSIG2Q96IQ7 327 aa12.16□□□□□ -0.46
HSPG2-208ENST00000471322 CDC42SE2Q9NRR3 84 aa12.16□□□□□ -0.46
HSPG2-208ENST00000471322 LYSTQ99698 3801 aa12.16□□□□□ -0.46
HSPG2-208ENST00000471322 MYMXA0A1B0GTQ4 84 aa12.15□□□□□ -0.46
HSPG2-208ENST00000471322 TMEM223A0PJW6 202 aa12.15□□□□□ -0.46
HSPG2-208ENST00000471322 ZNF22P17026 224 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-208ENST00000471322 UBE2D1P51668 147 aa12.15□□□□□ -0.46
HSPG2-208ENST00000471322 HINT1P49773 126 aaPredicted RBP12.15□□□□□ -0.47
HSPG2-208ENST00000471322 TIRAPP58753 221 aa12.15□□□□□ -0.47
HSPG2-208ENST00000471322 RNASE13Q5GAN3 156 aaKnown RBP12.15□□□□□ -0.47
HSPG2-208ENST00000471322 COL5A1-AS1Q5SY13 56 aa12.15□□□□□ -0.47
HSPG2-208ENST00000471322 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.47
HSPG2-208ENST00000471322 GEMIN7Q9H840 131 aaKnown RBP12.15□□□□□ -0.47
HSPG2-208ENST00000471322 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
HSPG2-208ENST00000471322 C12orf74Q32Q52 190 aa12.14□□□□□ -0.47
HSPG2-208ENST00000471322 HSD52Q0P140 79 aa12.13□□□□□ -0.47
HSPG2-208ENST00000471322 MPV17L2Q567V2 206 aa12.13□□□□□ -0.47
HSPG2-208ENST00000471322 FAM19A3Q7Z5A8 133 aa12.13□□□□□ -0.47
HSPG2-208ENST00000471322 MAPKAPK5-AS1Q8N8E1 139 aa12.13□□□□□ -0.47
HSPG2-208ENST00000471322 DYNC2H1Q8NCM8 4307 aaKnown RBP12.12□□□□□ -0.47
HSPG2-208ENST00000471322 A0A0J9YY99 117 aa12.12□□□□□ -0.47
HSPG2-208ENST00000471322 LEPROTO15243 131 aa12.12□□□□□ -0.47
HSPG2-208ENST00000471322 GAGE6Q13070 117 aa12.12□□□□□ -0.47
HSPG2-208ENST00000471322 PLEKHB2Q96CS7 222 aa12.12□□□□□ -0.47
HSPG2-208ENST00000471322 TTTY13Q9BZ97 58 aa12.12□□□□□ -0.47
HSPG2-208ENST00000471322 RYR3Q15413 4870 aa12.12□□□□□ -0.47
HSPG2-208ENST00000471322 H3BRM9 83 aa12.11□□□□□ -0.47
HSPG2-208ENST00000471322 HTN3P15516 51 aa12.11□□□□□ -0.47
HSPG2-208ENST00000471322 HERVK_113P63121 156 aa12.11□□□□□ -0.47
HSPG2-208ENST00000471322 BVES-AS1Q5T3Y7 98 aa12.11□□□□□ -0.47
HSPG2-208ENST00000471322 SACSQ9NZJ4 4579 aa12.11□□□□□ -0.47
HSPG2-208ENST00000471322 Q6ZTC4 211 aa12.11□□□□□ -0.47
HSPG2-208ENST00000471322 ICOSQ9Y6W8 199 aa12.11□□□□□ -0.47
HSPG2-208ENST00000471322 IGLV5-45A0A087WSX0 123 aa12.1□□□□□ -0.47
HSPG2-208ENST00000471322 ZNF815PA8K554 130 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms