RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TRAV8-4A0A0B4J246 113 aa13.02□□□□□ -0.33
HDAC7-220ENST00000471235 IGKV3OR2-268A0A0C4DH90 116 aa13.02□□□□□ -0.33
HDAC7-220ENST00000471235 COX19Q49B96 90 aa13.02□□□□□ -0.33
HDAC7-220ENST00000471235 UBE2D4Q9Y2X8 147 aa13.02□□□□□ -0.33
HDAC7-220ENST00000471235 TGIF2-C20orf24A0A0A6YYL0 155 aa13.01□□□□□ -0.33
HDAC7-220ENST00000471235 LOC389332A0A1B0GUA5 103 aa13.01□□□□□ -0.33
HDAC7-220ENST00000471235 LRP1BQ9NZR2 4599 aa13.01□□□□□ -0.33
HDAC7-220ENST00000471235 NTN5Q8WTR8 489 aaPredicted RBP13□□□□□ -0.33
HDAC7-220ENST00000471235 MT-ND6P03923 174 aa12.99□□□□□ -0.33
HDAC7-220ENST00000471235 RPL39P62891 51 aaKnown RBP12.99□□□□□ -0.33
HDAC7-220ENST00000471235 Q8N8P6 123 aa12.99□□□□□ -0.33
HDAC7-220ENST00000471235 TMEM18Q96B42 140 aa12.99□□□□□ -0.33
HDAC7-220ENST00000471235 CDC42SE2Q9NRR3 84 aa12.99□□□□□ -0.33
HDAC7-220ENST00000471235 IGLV5-52A0A0A0MRZ9 124 aa12.98□□□□□ -0.33
HDAC7-220ENST00000471235 RAB5AP20339 215 aa12.98□□□□□ -0.33
HDAC7-220ENST00000471235 SMAGPQ0VAQ4 97 aa12.98□□□□□ -0.33
HDAC7-220ENST00000471235 DGAT2L7PQ6IED9 249 aa12.98□□□□□ -0.33
HDAC7-220ENST00000471235 TIMM21Q9BVV7 248 aa12.98□□□□□ -0.33
HDAC7-220ENST00000471235 MRPL18Q9H0U6 180 aaKnown RBP12.98□□□□□ -0.33
HDAC7-220ENST00000471235 CSDC2Q9Y534 153 aaKnown RBP12.98□□□□□ -0.33
HDAC7-220ENST00000471235 KIAA1109Q2LD37 5005 aa12.97□□□□□ -0.33
HDAC7-220ENST00000471235 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-220ENST00000471235 USP17L23D6RBM5 183 aa12.97□□□□□ -0.33
HDAC7-220ENST00000471235 Q6ZUT4 128 aa12.97□□□□□ -0.33
HDAC7-220ENST00000471235 ZNF664Q8N3J9 261 aa12.97□□□□□ -0.33
HDAC7-220ENST00000471235 CHCHD10Q8WYQ3 142 aaPredicted RBP12.96□□□□□ -0.33
HDAC7-220ENST00000471235 YPEL4Q96NS1 127 aa12.96□□□□□ -0.33
HDAC7-220ENST00000471235 LINC00959A0A1B0GUT2 108 aa12.95□□□□□ -0.34
HDAC7-220ENST00000471235 GAGE12HA6NDE8 117 aa12.95□□□□□ -0.34
HDAC7-220ENST00000471235 RNASE13Q5GAN3 156 aaKnown RBP12.95□□□□□ -0.34
HDAC7-220ENST00000471235 ALKBH7Q9BT30 221 aaPredicted RBP12.95□□□□□ -0.34
HDAC7-220ENST00000471235 NXT2Q9NPJ8 142 aaKnown RBP12.95□□□□□ -0.34
HDAC7-220ENST00000471235 SPANXA1Q9NS26 97 aa12.95□□□□□ -0.34
HDAC7-220ENST00000471235 FABP9Q0Z7S8 132 aa12.94□□□□□ -0.34
HDAC7-220ENST00000471235 C14orf177Q52M58 125 aa12.94□□□□□ -0.34
HDAC7-220ENST00000471235 GCSHP23434 173 aa12.93□□□□□ -0.34
HDAC7-220ENST00000471235 IFI27P40305 119 aaPredicted RBP12.93□□□□□ -0.34
HDAC7-220ENST00000471235 KRTAP10-1P60331 282 aa12.93□□□□□ -0.34
HDAC7-220ENST00000471235 CBLN2Q8IUK8 224 aa12.93□□□□□ -0.34
HDAC7-220ENST00000471235 FAM104AQ969W3 186 aa12.93□□□□□ -0.34
HDAC7-220ENST00000471235 APOBP04114 4563 aaKnown RBP12.91□□□□□ -0.34
HDAC7-220ENST00000471235 RYR1P21817 5038 aa12.91□□□□□ -0.34
HDAC7-220ENST00000471235 K7EMI3 77 aa12.91□□□□□ -0.34
HDAC7-220ENST00000471235 CCL25O15444 150 aa12.91□□□□□ -0.34
HDAC7-220ENST00000471235 FOXI1Q12951 378 aa12.91□□□□□ -0.34
HDAC7-220ENST00000471235 ORMDL2Q53FV1 153 aa12.91□□□□□ -0.34
HDAC7-220ENST00000471235 TRAPPC1Q9Y5R8 145 aa12.91□□□□□ -0.34
HDAC7-220ENST00000471235 HERC2O95714 4834 aa12.9□□□□□ -0.34
HDAC7-220ENST00000471235 PRSS1P07477 247 aa12.9□□□□□ -0.34
HDAC7-220ENST00000471235 XCL1P47992 114 aa12.9□□□□□ -0.34
HDAC7-220ENST00000471235 MRPS36P82909 103 aaKnown RBP12.9□□□□□ -0.34
HDAC7-220ENST00000471235 SS18Q15532 418 aa12.9□□□□□ -0.34
HDAC7-220ENST00000471235 OPRPNQ99935 248 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-220ENST00000471235 CDK2AP2O75956 126 aa12.89□□□□□ -0.35
HDAC7-220ENST00000471235 C2orf66Q6UXQ4 117 aa12.89□□□□□ -0.35
HDAC7-220ENST00000471235 SMCO4Q9NRQ5 59 aa12.89□□□□□ -0.35
HDAC7-220ENST00000471235 CYSLTR1Q9Y271 337 aa12.89□□□□□ -0.35
HDAC7-220ENST00000471235 C15orf56Q8N910 161 aa12.88□□□□□ -0.35
HDAC7-220ENST00000471235 PYGO1Q9Y3Y4 419 aa12.88□□□□□ -0.35
HDAC7-220ENST00000471235 IGLV4-3A0A075B6K6 122 aa12.87□□□□□ -0.35
HDAC7-220ENST00000471235 TRAV13-1A0A0B4J241 112 aa12.87□□□□□ -0.35
HDAC7-220ENST00000471235 PRSS3P2Q8NHM4 247 aa12.87□□□□□ -0.35
HDAC7-220ENST00000471235 LINC01546A6NGU7 62 aa12.86□□□□□ -0.35
HDAC7-220ENST00000471235 CD164L2Q6UWJ8 174 aa12.86□□□□□ -0.35
HDAC7-220ENST00000471235 hDV102S1A0JD36 115 aa12.85□□□□□ -0.35
HDAC7-220ENST00000471235 C1orf196B1AJZ1 125 aa12.85□□□□□ -0.35
HDAC7-220ENST00000471235 LINC01620Q4KN68 170 aa12.85□□□□□ -0.35
HDAC7-220ENST00000471235 HSPG2P98160 4391 aa12.84□□□□□ -0.35
HDAC7-220ENST00000471235 IFITM10A6NMD0 228 aa12.84□□□□□ -0.35
HDAC7-220ENST00000471235 CFAP161Q6P656 301 aa12.84□□□□□ -0.35
HDAC7-220ENST00000471235 C18orf32Q8TCD1 76 aa12.84□□□□□ -0.35
HDAC7-220ENST00000471235 TMEM141Q96I45 108 aa12.84□□□□□ -0.35
HDAC7-220ENST00000471235 FA2HQ7L5A8 372 aa12.83□□□□□ -0.36
HDAC7-220ENST00000471235 IGIPA6NJ69 53 aa12.82□□□□□ -0.36
HDAC7-220ENST00000471235 HIGD2BQ4VC39 106 aa12.82□□□□□ -0.36
HDAC7-220ENST00000471235 TOMM6Q96B49 74 aa12.82□□□□□ -0.36
HDAC7-220ENST00000471235 DNAH8Q96JB1 4490 aa12.81□□□□□ -0.36
HDAC7-220ENST00000471235 GVQW2A0A096LPI5 108 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-220ENST00000471235 G0S2P27469 103 aa12.81□□□□□ -0.36
HDAC7-220ENST00000471235 CNBPP62633 177 aaKnown RBP12.81□□□□□ -0.36
HDAC7-220ENST00000471235 LINC00173Q6ZV60 143 aa12.81□□□□□ -0.36
HDAC7-220ENST00000471235 IGHV1-58A0A0C4DH39 117 aa12.8□□□□□ -0.36
HDAC7-220ENST00000471235 NPSP0C0P6 89 aa12.8□□□□□ -0.36
HDAC7-220ENST00000471235 TEX43Q6ZNM6 134 aa12.8□□□□□ -0.36
HDAC7-220ENST00000471235 URB1-AS1Q96HZ7 61 aa12.8□□□□□ -0.36
HDAC7-220ENST00000471235 AP5S1Q9NUS5 200 aa12.8□□□□□ -0.36
HDAC7-220ENST00000471235 COX7A2LO14548 114 aa12.79□□□□□ -0.36
HDAC7-220ENST00000471235 XGP55808 180 aa12.79□□□□□ -0.36
HDAC7-220ENST00000471235 ZC2HC1BQ5TFG8 222 aa12.79□□□□□ -0.36
HDAC7-220ENST00000471235 Q6ZN92 141 aa12.79□□□□□ -0.36
HDAC7-220ENST00000471235 Q6ZSA8 131 aa12.79□□□□□ -0.36
HDAC7-220ENST00000471235 AMELXQ99217 191 aa12.79□□□□□ -0.36
HDAC7-220ENST00000471235 TIMM17AQ99595 171 aa12.79□□□□□ -0.36
HDAC7-220ENST00000471235 FAM30AQ9NZY2 134 aa12.79□□□□□ -0.36
HDAC7-220ENST00000471235 SLPIP03973 132 aa12.78□□□□□ -0.36
HDAC7-220ENST00000471235 HAMPP81172 84 aa12.78□□□□□ -0.36
HDAC7-220ENST00000471235 C9orf163Q8N9P6 203 aa12.78□□□□□ -0.36
HDAC7-220ENST00000471235 C5orf38Q86SI9 138 aa12.77□□□□□ -0.37
HDAC7-220ENST00000471235 C2orf88Q9BSF0 95 aa12.77□□□□□ -0.37
HDAC7-220ENST00000471235 MALP21145 153 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms