RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 RPL39P62891 51 aaKnown RBP8.44□□□□□ -1.06
SND1-209ENST00000470723 MRPS36P82909 103 aaKnown RBP8.44□□□□□ -1.06
SND1-209ENST00000470723 MIAQ16674 131 aa8.44□□□□□ -1.06
SND1-209ENST00000470723 RNASEKQ6P5S7 137 aaKnown RBP8.44□□□□□ -1.06
SND1-209ENST00000470723 ZNF664Q8N3J9 261 aa8.44□□□□□ -1.06
SND1-209ENST00000470723 TMEM101Q96IK0 257 aa8.44□□□□□ -1.06
SND1-209ENST00000470723 SPANXA1Q9NS26 97 aa8.44□□□□□ -1.06
SND1-209ENST00000470723 COX11Q9Y6N1 276 aa8.44□□□□□ -1.06
SND1-209ENST00000470723 TRAV8-4A0A0B4J246 113 aa8.43□□□□□ -1.06
SND1-209ENST00000470723 IGIPA6NJ69 53 aa8.43□□□□□ -1.06
SND1-209ENST00000470723 REG3AQ06141 175 aa8.43□□□□□ -1.06
SND1-209ENST00000470723 C2orf66Q6UXQ4 117 aa8.43□□□□□ -1.06
SND1-209ENST00000470723 LINC00336Q6ZUF6 198 aa8.43□□□□□ -1.06
SND1-209ENST00000470723 OR5A1Q8NGJ0 315 aa8.43□□□□□ -1.06
SND1-209ENST00000470723 UBE2WQ96B02 151 aa8.43□□□□□ -1.06
SND1-209ENST00000470723 TOMM6Q96B49 74 aa8.43□□□□□ -1.06
SND1-209ENST00000470723 TM2D2Q9BX73 214 aa8.43□□□□□ -1.06
SND1-209ENST00000470723 PKD1P98161 4303 aa8.43□□□□□ -1.06
SND1-209ENST00000470723 DGAT2L7PQ6IED9 249 aa8.42□□□□□ -1.06
SND1-209ENST00000470723 KRTAP26-1Q6PEX3 210 aa8.42□□□□□ -1.06
SND1-209ENST00000470723 FA2HQ7L5A8 372 aa8.42□□□□□ -1.06
SND1-209ENST00000470723 CHCHD1Q96BP2 118 aaKnown RBP8.42□□□□□ -1.06
SND1-209ENST00000470723 RMI2Q96E14 147 aa8.42□□□□□ -1.06
SND1-209ENST00000470723 AP5S1Q9NUS5 200 aa8.42□□□□□ -1.06
SND1-209ENST00000470723 CYSLTR1Q9Y271 337 aa8.42□□□□□ -1.06
SND1-209ENST00000470723 CCL25O15444 150 aa8.41□□□□□ -1.06
SND1-209ENST00000470723 MAPKAPK5-AS1Q8N8E1 139 aa8.4□□□□□ -1.06
SND1-209ENST00000470723 A0A096LNJ9 63 aa8.39□□□□□ -1.07
SND1-209ENST00000470723 CRPP02741 224 aa8.39□□□□□ -1.07
SND1-209ENST00000470723 ERASQ7Z444 233 aa8.39□□□□□ -1.07
SND1-209ENST00000470723 TMEM141Q96I45 108 aa8.39□□□□□ -1.07
SND1-209ENST00000470723 AMELXQ99217 191 aa8.39□□□□□ -1.07
SND1-209ENST00000470723 TIMM17AQ99595 171 aa8.39□□□□□ -1.07
SND1-209ENST00000470723 Q9HAA7 133 aa8.39□□□□□ -1.07
SND1-209ENST00000470723 PCLOQ9Y6V0 5065 aa8.39□□□□□ -1.07
SND1-209ENST00000470723 IGLV4-3A0A075B6K6 122 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 LINC00959A0A1B0GUT2 108 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 LRCOL1A6NCL2 159 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HIST1H2BKO60814 126 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HIST1H2BJP06899 126 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HIST1H2BOP23527 126 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HIST1H2BBP33778 126 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HIST1H2BDP58876 126 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HIST1H2BCP62807 126 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HIST2H2BEQ16778 126 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.38□□□□□ -1.07
SND1-209ENST00000470723 BAGE3Q86Y29 109 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HIST1H2BHQ93079 126 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HIST1H2BNQ99877 126 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HIST1H2BMQ99879 126 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 OPRPNQ99935 248 aaPredicted RBP8.38□□□□□ -1.07
SND1-209ENST00000470723 C1orf43Q9BWL3 253 aa8.38□□□□□ -1.07
SND1-209ENST00000470723 HECTD4Q9Y4D8 3996 aa8.37□□□□□ -1.07
SND1-209ENST00000470723 IGKV2D-24A0A075B6R9 120 aa8.37□□□□□ -1.07
SND1-209ENST00000470723 PRSS29PA6NIE9 313 aa8.37□□□□□ -1.07
SND1-209ENST00000470723 C1orf196B1AJZ1 125 aa8.37□□□□□ -1.07
SND1-209ENST00000470723 LINC00310P59036 64 aa8.37□□□□□ -1.07
SND1-209ENST00000470723 TNP2Q05952 138 aa8.37□□□□□ -1.07
SND1-209ENST00000470723 PDZD11Q5EBL8 140 aa8.37□□□□□ -1.07
SND1-209ENST00000470723 Q6ZUT4 128 aa8.37□□□□□ -1.07
SND1-209ENST00000470723 DNAH5Q8TE73 4624 aa8.36□□□□□ -1.07
SND1-209ENST00000470723 HBDP02042 147 aa8.36□□□□□ -1.07
SND1-209ENST00000470723 COA6Q5JTJ3 125 aaKnown RBP8.36□□□□□ -1.07
SND1-209ENST00000470723 PAPPA-AS1Q5QFB9 102 aa8.36□□□□□ -1.07
SND1-209ENST00000470723 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
SND1-209ENST00000470723 A0A087WTM6 91 aa8.35□□□□□ -1.07
SND1-209ENST00000470723 A0A1B0GVY2 172 aa8.35□□□□□ -1.07
SND1-209ENST00000470723 NUPR1O60356 82 aa8.35□□□□□ -1.07
SND1-209ENST00000470723 SS18Q15532 418 aa8.35□□□□□ -1.07
SND1-209ENST00000470723 CLPSL2Q6UWE3 100 aa8.35□□□□□ -1.07
SND1-209ENST00000470723 LINC00173Q6ZV60 143 aa8.35□□□□□ -1.07
SND1-209ENST00000470723 FAM19A3Q7Z5A8 133 aa8.35□□□□□ -1.07
SND1-209ENST00000470723 CHCHD10Q8WYQ3 142 aaPredicted RBP8.35□□□□□ -1.07
SND1-209ENST00000470723 VCX2Q9H322 139 aa8.35□□□□□ -1.07
SND1-209ENST00000470723 PSCAO43653 123 aa8.34□□□□□ -1.07
SND1-209ENST00000470723 SERF1AO75920 110 aa8.34□□□□□ -1.07
SND1-209ENST00000470723 CD164L2Q6UWJ8 174 aa8.34□□□□□ -1.07
SND1-209ENST00000470723 DYNC1H1Q14204 4646 aaKnown RBP8.34□□□□□ -1.07
SND1-209ENST00000470723 IGLV10-54A0A075B6I4 117 aa8.33□□□□□ -1.08
SND1-209ENST00000470723 HSBP1O75506 76 aa8.33□□□□□ -1.08
SND1-209ENST00000470723 FOXI1Q12951 378 aa8.33□□□□□ -1.08
SND1-209ENST00000470723 RNASE13Q5GAN3 156 aaKnown RBP8.33□□□□□ -1.08
SND1-209ENST00000470723 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
SND1-209ENST00000470723 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
SND1-209ENST00000470723 IGKV3OR2-268A0A0C4DH90 116 aa8.32□□□□□ -1.08
SND1-209ENST00000470723 GAGE12HA6NDE8 117 aa8.32□□□□□ -1.08
SND1-209ENST00000470723 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.32□□□□□ -1.08
SND1-209ENST00000470723 ATP5LO75964 103 aa8.32□□□□□ -1.08
SND1-209ENST00000470723 UBE2D1P51668 147 aa8.32□□□□□ -1.08
SND1-209ENST00000470723 PMCHL1Q16048 86 aa8.32□□□□□ -1.08
SND1-209ENST00000470723 Q6ZN92 141 aa8.32□□□□□ -1.08
SND1-209ENST00000470723 BAALCQ8WXS3 180 aa8.32□□□□□ -1.08
SND1-209ENST00000470723 CST9LQ9H4G1 147 aa8.32□□□□□ -1.08
SND1-209ENST00000470723 IGHV3OR16-9A0A0B4J2B5 98 aa8.31□□□□□ -1.08
SND1-209ENST00000470723 PMVKQ15126 192 aa8.31□□□□□ -1.08
SND1-209ENST00000470723 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
SND1-209ENST00000470723 FAM19A2Q8N3H0 131 aa8.31□□□□□ -1.08
SND1-209ENST00000470723 PKHD1P08F94 4074 aa8.3□□□□□ -1.08
SND1-209ENST00000470723 IFITM10A6NMD0 228 aa8.3□□□□□ -1.08
SND1-209ENST00000470723 XCL1P47992 114 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms