RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 A0A087WX48 190 aa4.35□□□□□ -1.71
PTP4A1-202ENST00000470661 TRBV6-8A0A0A6YYG3 113 aa4.35□□□□□ -1.71
PTP4A1-202ENST00000470661 PDE6DO43924 150 aa4.35□□□□□ -1.71
PTP4A1-202ENST00000470661 SMIM17P0DL12 118 aa4.35□□□□□ -1.71
PTP4A1-202ENST00000470661 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
PTP4A1-202ENST00000470661 URGCP-MRPS24S4R325 110 aa4.35□□□□□ -1.71
PTP4A1-202ENST00000470661 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 A0A087WWC5 75 aa4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 TRBV10-1A0A0K0K1A3 114 aa4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 ANGP03950 147 aaKnown RBP4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 SRP19P09132 144 aaKnown RBP4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 CXCL1P09341 107 aa4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 RBX1P62877 108 aa4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 LINC00269Q8N2A0 174 aa4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 GATD1Q8NB37 220 aa4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 AP1S3Q96PC3 154 aa4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 EIF5A2Q9GZV4 153 aaKnown RBP4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 RPP21Q9H633 154 aaKnown RBP4.34□□□□□ -1.71
PTP4A1-202ENST00000470661 IGLV4-60A0A075B6I1 120 aa4.33□□□□□ -1.72
PTP4A1-202ENST00000470661 TRAV8-3A0A0A6YYJ7 113 aa4.33□□□□□ -1.72
PTP4A1-202ENST00000470661 IGKV3OR2-268A0A0C4DH90 116 aa4.33□□□□□ -1.72
PTP4A1-202ENST00000470661 EPM2AB3EWF7 344 aa4.33□□□□□ -1.72
PTP4A1-202ENST00000470661 SMKR1H3BMG3 65 aa4.33□□□□□ -1.72
PTP4A1-202ENST00000470661 GATCO43716 136 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-202ENST00000470661 RPS20P60866 119 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-202ENST00000470661 CACNG7P62955 275 aa4.33□□□□□ -1.72
PTP4A1-202ENST00000470661 Q5VSD8 79 aa4.33□□□□□ -1.72
PTP4A1-202ENST00000470661 LYPD6BQ8NI32 183 aa4.33□□□□□ -1.72
PTP4A1-202ENST00000470661 RPS10P5Q9NQ39 176 aa4.33□□□□□ -1.72
PTP4A1-202ENST00000470661 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.32□□□□□ -1.72
PTP4A1-202ENST00000470661 IGKV2-29A2NJV5 120 aaPredicted RBP4.32□□□□□ -1.72
PTP4A1-202ENST00000470661 K7EP13 123 aa4.32□□□□□ -1.72
PTP4A1-202ENST00000470661 HLA-DQA1P01909 254 aa4.32□□□□□ -1.72
PTP4A1-202ENST00000470661 RASL11AQ6T310 242 aa4.32□□□□□ -1.72
PTP4A1-202ENST00000470661 Q8NBF4 154 aa4.32□□□□□ -1.72
PTP4A1-202ENST00000470661 SMIM7Q9BQ49 75 aa4.32□□□□□ -1.72
PTP4A1-202ENST00000470661 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 ZNF727A8MUV8 499 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 F2Z2F3 143 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 INAFM2P0DMQ5 153 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 CTRLP40313 264 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 LAGE3Q14657 143 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 KRTAP26-1Q6PEX3 210 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 KCNIP4Q6PIL6 250 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 LINC01551Q86U37 167 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 C20orf203Q8NBC4 194 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 C2orf48Q96LS8 159 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 FAM218AQ96MZ4 157 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 FAM210AQ96ND0 272 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 DPH3P1Q9H4G8 78 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 NIT2Q9NQR4 276 aa4.31□□□□□ -1.72
PTP4A1-202ENST00000470661 TRBV25-1A0A075B6N4 114 aa4.3□□□□□ -1.72
PTP4A1-202ENST00000470661 IGHV1-24A0A0C4DH33 117 aa4.3□□□□□ -1.72
PTP4A1-202ENST00000470661 XKRY2A2RUG3 117 aa4.3□□□□□ -1.72
PTP4A1-202ENST00000470661 TMEM250H0YL14 139 aa4.3□□□□□ -1.72
PTP4A1-202ENST00000470661 PANO1I0J062 215 aa4.3□□□□□ -1.72
PTP4A1-202ENST00000470661 NCR2O95944 276 aa4.3□□□□□ -1.72
PTP4A1-202ENST00000470661 CRPP02741 224 aa4.3□□□□□ -1.72
PTP4A1-202ENST00000470661 RPS10P46783 165 aaKnown RBP4.3□□□□□ -1.72
PTP4A1-202ENST00000470661 IQCJQ1A5X6 159 aa4.3□□□□□ -1.72
PTP4A1-202ENST00000470661 RNF185Q96GF1 192 aa4.3□□□□□ -1.72
PTP4A1-202ENST00000470661 TMEM243Q9BU79 118 aa4.3□□□□□ -1.72
PTP4A1-202ENST00000470661 PKHD1L1Q86WI1 4243 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 FAM231BA6NCW3 169 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 HIGD1CA8MV81 97 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 TRGC1P0CF51 173 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 RPL23P62829 140 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 REG3AQ06141 175 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 ADIRFQ15847 76 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 SCXQ7RTU7 201 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 AMN1Q8IY45 258 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 NUP35Q8NFH5 326 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 RMI2Q96E14 147 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 SMIM12Q96EX1 92 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 LINC00526Q96FQ7 95 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 BIN3Q9NQY0 253 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 TMEM242Q9NWH2 141 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 V9GYV3 84 aa4.29□□□□□ -1.72
PTP4A1-202ENST00000470661 FAT3Q8TDW7 4589 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 SDHAF1A6NFY7 115 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 A8MWL6 223 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 H7C1H1 209 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 RAB4AP20338 218 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 TAGLN2P37802 199 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 Q0VG73 95 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 ELOBQ15370 118 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 TMEM241Q24JQ0 296 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 RNASEKQ6P5S7 137 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 TEX261Q6UWH6 196 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 FAM231DQ6ZW35 169 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 CIRBP-AS1Q8TBR5 109 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 FRZBQ92765 325 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 ISOC2Q96AB3 205 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 CHCHD7Q9BUK0 85 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 CNFNQ9BYD5 112 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 PRR34Q9NV39 138 aa4.28□□□□□ -1.72
PTP4A1-202ENST00000470661 DMBT1Q9UGM3 2413 aaPredicted RBP4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 A0A1B0GUT8 65 aa4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 UBE2L6O14933 153 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms