RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 UBE2D2P62837 147 aa5.76□□□□□ -1.49
SMC4-212ENST00000470240 C1orf158Q8N1D5 194 aa5.76□□□□□ -1.49
SMC4-212ENST00000470240 VSIG2Q96IQ7 327 aa5.76□□□□□ -1.49
SMC4-212ENST00000470240 SPANXDQ9BXN6 97 aa5.76□□□□□ -1.49
SMC4-212ENST00000470240 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
SMC4-212ENST00000470240 ESM1Q9NQ30 184 aa5.76□□□□□ -1.49
SMC4-212ENST00000470240 SPANXCQ9NY87 97 aa5.76□□□□□ -1.49
SMC4-212ENST00000470240 CSDC2Q9Y534 153 aaKnown RBP5.76□□□□□ -1.49
SMC4-212ENST00000470240 TRGV4A0A0C4DH28 118 aa5.75□□□□□ -1.49
SMC4-212ENST00000470240 IGLV1-51P01701 117 aa5.75□□□□□ -1.49
SMC4-212ENST00000470240 PRSS2P07478 247 aa5.75□□□□□ -1.49
SMC4-212ENST00000470240 WFDC2Q14508 124 aa5.75□□□□□ -1.49
SMC4-212ENST00000470240 MIAQ16674 131 aa5.75□□□□□ -1.49
SMC4-212ENST00000470240 ZFAND6Q6FIF0 208 aa5.75□□□□□ -1.49
SMC4-212ENST00000470240 CEMP1Q6PRD7 247 aaPredicted RBP5.75□□□□□ -1.49
SMC4-212ENST00000470240 MUSTN1Q8IVN3 82 aa5.75□□□□□ -1.49
SMC4-212ENST00000470240 TMEM243Q9BU79 118 aa5.75□□□□□ -1.49
SMC4-212ENST00000470240 GTSF1LQ9H1H1 148 aa5.75□□□□□ -1.49
SMC4-212ENST00000470240 FAM208BQ5VWN6 2430 aa5.75□□□□□ -1.49
SMC4-212ENST00000470240 SMG1Q96Q15 3661 aaKnown RBP5.75□□□□□ -1.49
SMC4-212ENST00000470240 TRBV6-4A0A1B0GX49 114 aa5.74□□□□□ -1.49
SMC4-212ENST00000470240 NDUFA1O15239 70 aa5.74□□□□□ -1.49
SMC4-212ENST00000470240 PRM2P04554 102 aa5.74□□□□□ -1.49
SMC4-212ENST00000470240 SPINK8P0C7L1 97 aa5.74□□□□□ -1.49
SMC4-212ENST00000470240 PLA2G2AP14555 144 aa5.74□□□□□ -1.49
SMC4-212ENST00000470240 ATXN8Q156A1 80 aa5.74□□□□□ -1.49
SMC4-212ENST00000470240 RNASE13Q5GAN3 156 aaKnown RBP5.74□□□□□ -1.49
SMC4-212ENST00000470240 Q6ZSN1 163 aa5.74□□□□□ -1.49
SMC4-212ENST00000470240 RNF183Q96D59 192 aa5.74□□□□□ -1.49
SMC4-212ENST00000470240 NOP10Q9NPE3 64 aaKnown RBP5.74□□□□□ -1.49
SMC4-212ENST00000470240 NACAE9PAV3 2078 aa5.74□□□□□ -1.49
SMC4-212ENST00000470240 USP9XQ93008 2570 aaPredicted RBP5.74□□□□□ -1.49
SMC4-212ENST00000470240 TACC2O95359 2948 aa5.74□□□□□ -1.49
SMC4-212ENST00000470240 CREBBPQ92793 2442 aa5.74□□□□□ -1.49
SMC4-212ENST00000470240 IGLV5-45A0A087WSX0 123 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 GAGE12JA6NER3 117 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 M0QXV9 152 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 GAGE7O76087 117 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 GAGE12FP0CL80 117 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 GAGE12GP0CL81 117 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 GAGE12IP0CL82 117 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 RPL35AP18077 110 aaKnown RBP5.73□□□□□ -1.49
SMC4-212ENST00000470240 HERV-K104P63124 156 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 GAGE4Q13068 117 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 GAGE5Q13069 117 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 ETDBQ3ZM63 59 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 Q6ZTI0 123 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 PPDPFLQ8WWR9 84 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 ITPR1Q14643 2758 aa5.73□□□□□ -1.49
SMC4-212ENST00000470240 TRAV8-3A0A0A6YYJ7 113 aa5.72□□□□□ -1.49
SMC4-212ENST00000470240 H7C2G1 150 aa5.72□□□□□ -1.49
SMC4-212ENST00000470240 IGHV3-33P01772 117 aa5.72□□□□□ -1.49
SMC4-212ENST00000470240 SCGB1A1P11684 91 aa5.72□□□□□ -1.49
SMC4-212ENST00000470240 SFTA2Q6UW10 78 aa5.72□□□□□ -1.49
SMC4-212ENST00000470240 FAM19A3Q7Z5A8 133 aa5.72□□□□□ -1.49
SMC4-212ENST00000470240 TEN1Q86WV5 123 aa5.72□□□□□ -1.49
SMC4-212ENST00000470240 SIGMAR1Q99720 223 aa5.72□□□□□ -1.49
SMC4-212ENST00000470240 CDKN2A-AS1Q9UH64 79 aa5.72□□□□□ -1.49
SMC4-212ENST00000470240 PRO0461Q9UI25 63 aa5.72□□□□□ -1.49
SMC4-212ENST00000470240 IGSF10Q6WRI0 2623 aa5.71□□□□□ -1.5
SMC4-212ENST00000470240 TRAV13-1A0A0B4J241 112 aa5.71□□□□□ -1.5
SMC4-212ENST00000470240 TRBV30A0A0K0K1B3 111 aa5.71□□□□□ -1.5
SMC4-212ENST00000470240 TCL1BO95988 128 aa5.71□□□□□ -1.5
SMC4-212ENST00000470240 INSL3P51460 131 aa5.71□□□□□ -1.5
SMC4-212ENST00000470240 KRTAP1-1Q07627 177 aa5.71□□□□□ -1.5
SMC4-212ENST00000470240 MEIG1Q5JSS6 88 aa5.71□□□□□ -1.5
SMC4-212ENST00000470240 SH2D6Q7Z4S9 175 aa5.71□□□□□ -1.5
SMC4-212ENST00000470240 OVOL2Q9BRP0 275 aa5.71□□□□□ -1.5
SMC4-212ENST00000470240 SORL1Q92673 2214 aa5.71□□□□□ -1.5
SMC4-212ENST00000470240 ZNF462Q96JM2 2506 aa5.71□□□□□ -1.5
SMC4-212ENST00000470240 NAV2Q8IVL1 2488 aa5.7□□□□□ -1.5
SMC4-212ENST00000470240 GAGE12HA6NDE8 117 aa5.7□□□□□ -1.5
SMC4-212ENST00000470240 SMIM9A6NGZ8 99 aa5.7□□□□□ -1.5
SMC4-212ENST00000470240 TMEM262E9PQX1 116 aa5.7□□□□□ -1.5
SMC4-212ENST00000470240 FOXI1Q12951 378 aa5.7□□□□□ -1.5
SMC4-212ENST00000470240 LINC00242Q5T6M2 205 aa5.7□□□□□ -1.5
SMC4-212ENST00000470240 MTURNQ8N3F0 131 aa5.7□□□□□ -1.5
SMC4-212ENST00000470240 MYO18BQ8IUG5 2567 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 IGLV5-39A0A0G2JS06 123 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 C9JAW5 83 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 SLC25A20O43772 301 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 RPL13AP40429 203 aaKnown RBP5.69□□□□□ -1.5
SMC4-212ENST00000470240 C9orf66Q5T8R8 295 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 HIST2H2BDQ6DRA6 164 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 PRIMA1Q86XR5 153 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 SBSPONQ8IVN8 264 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 FAM104AQ969W3 186 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 WWC2-AS2Q96NR7 200 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 LITAFQ99732 161 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 Q9H8V8 135 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 CDC42SE2Q9NRR3 84 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 ICOSQ9Y6W8 199 aa5.69□□□□□ -1.5
SMC4-212ENST00000470240 RELNP78509 3460 aa5.68□□□□□ -1.5
SMC4-212ENST00000470240 LINC01620Q4KN68 170 aa5.68□□□□□ -1.5
SMC4-212ENST00000470240 HIST2H2BCQ6DN03 193 aa5.68□□□□□ -1.5
SMC4-212ENST00000470240 KIR2DL5BQ8NHK3 375 aa5.68□□□□□ -1.5
SMC4-212ENST00000470240 CHCHD5Q9BSY4 110 aa5.68□□□□□ -1.5
SMC4-212ENST00000470240 PPDPFQ9H3Y8 114 aa5.68□□□□□ -1.5
SMC4-212ENST00000470240 Q9UF83 564 aa5.68□□□□□ -1.5
SMC4-212ENST00000470240 USP24Q9UPU5 2620 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms