RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 K7EP34 96 aa11.29□□□□□ -0.6
C19orf54-202ENST00000469741 EMP1P54849 157 aa11.29□□□□□ -0.6
C19orf54-202ENST00000469741 CEND1Q8N111 149 aa11.29□□□□□ -0.6
C19orf54-202ENST00000469741 FAM104AQ969W3 186 aa11.29□□□□□ -0.6
C19orf54-202ENST00000469741 NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
C19orf54-202ENST00000469741 DNAH7Q8WXX0 4024 aa11.29□□□□□ -0.6
C19orf54-202ENST00000469741 TRBV7-3A0A075B6L6 115 aa11.28□□□□□ -0.6
C19orf54-202ENST00000469741 GCSHP23434 173 aa11.28□□□□□ -0.6
C19orf54-202ENST00000469741 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
C19orf54-202ENST00000469741 K7EQD1 137 aa11.28□□□□□ -0.6
C19orf54-202ENST00000469741 UBE2D4Q9Y2X8 147 aa11.28□□□□□ -0.6
C19orf54-202ENST00000469741 ZNF815PA8K554 130 aa11.27□□□□□ -0.61
C19orf54-202ENST00000469741 RPL36AP83881 106 aaKnown RBP11.27□□□□□ -0.61
C19orf54-202ENST00000469741 RPL36ALQ969Q0 106 aaKnown RBP11.27□□□□□ -0.61
C19orf54-202ENST00000469741 CSMD3Q7Z407 3707 aa11.27□□□□□ -0.61
C19orf54-202ENST00000469741 FXYD2P54710 66 aa11.26□□□□□ -0.61
C19orf54-202ENST00000469741 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
C19orf54-202ENST00000469741 B9D2Q9BPU9 175 aa11.26□□□□□ -0.61
C19orf54-202ENST00000469741 TIMM21Q9BVV7 248 aa11.26□□□□□ -0.61
C19orf54-202ENST00000469741 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
C19orf54-202ENST00000469741 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
C19orf54-202ENST00000469741 MRPS36P82909 103 aaKnown RBP11.26□□□□□ -0.61
C19orf54-202ENST00000469741 DAZ4Q86SG3 579 aaKnown RBP11.26□□□□□ -0.61
C19orf54-202ENST00000469741 DAZ3Q9NR90 486 aaKnown RBP11.26□□□□□ -0.61
C19orf54-202ENST00000469741 IGHV3-38A0A0C4DH36 116 aa11.25□□□□□ -0.61
C19orf54-202ENST00000469741 A0A1W2PPM0 123 aa11.25□□□□□ -0.61
C19orf54-202ENST00000469741 ZNF22P17026 224 aaPredicted RBP11.25□□□□□ -0.61
C19orf54-202ENST00000469741 SLC25A29Q8N8R3 303 aa11.25□□□□□ -0.61
C19orf54-202ENST00000469741 HIST1H4GQ99525 98 aa11.25□□□□□ -0.61
C19orf54-202ENST00000469741 RETNQ9HD89 108 aa11.25□□□□□ -0.61
C19orf54-202ENST00000469741 A0A0J9YXV3 536 aa11.24□□□□□ -0.61
C19orf54-202ENST00000469741 FABP2P12104 132 aa11.24□□□□□ -0.61
C19orf54-202ENST00000469741 TRGV2A0A075B6R0 118 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
C19orf54-202ENST00000469741 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
C19orf54-202ENST00000469741 H3BUT2 72 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 LEPROTO15243 131 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 GAGE7O76087 117 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 GAGE12FP0CL80 117 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 GAGE12GP0CL81 117 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 GAGE12IP0CL82 117 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 UBE2D3P61077 147 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 UBE2D2P62837 147 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 TRBV6-4A0A1B0GX49 114 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 J3QQQ9 107 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 CEMP1Q6PRD7 247 aaPredicted RBP11.23□□□□□ -0.61
C19orf54-202ENST00000469741 VPS25Q9BRG1 176 aa11.23□□□□□ -0.61
C19orf54-202ENST00000469741 SCGB1D4Q6XE38 83 aa11.22□□□□□ -0.61
C19orf54-202ENST00000469741 TINCRA0A1B0GVN0 87 aa11.21□□□□□ -0.61
C19orf54-202ENST00000469741 TSPEAR-AS2P59090 65 aa11.21□□□□□ -0.61
C19orf54-202ENST00000469741 PLEKHB2Q96CS7 222 aa11.21□□□□□ -0.61
C19orf54-202ENST00000469741 SMIM9A6NGZ8 99 aa11.21□□□□□ -0.62
C19orf54-202ENST00000469741 LGALS3P17931 250 aaKnown RBP11.21□□□□□ -0.62
C19orf54-202ENST00000469741 KIR2DL5BQ8NHK3 375 aa11.21□□□□□ -0.62
C19orf54-202ENST00000469741 GTSF1LQ9H1H1 148 aa11.21□□□□□ -0.62
C19orf54-202ENST00000469741 CSDC2Q9Y534 153 aaKnown RBP11.21□□□□□ -0.62
C19orf54-202ENST00000469741 SPCS1Q9Y6A9 102 aa11.21□□□□□ -0.62
C19orf54-202ENST00000469741 STARD9Q9P2P6 4700 aa11.2□□□□□ -0.62
C19orf54-202ENST00000469741 A0A0J9YY99 117 aa11.2□□□□□ -0.62
C19orf54-202ENST00000469741 A8MZ25 164 aa11.2□□□□□ -0.62
C19orf54-202ENST00000469741 SMAGPQ0VAQ4 97 aa11.2□□□□□ -0.62
C19orf54-202ENST00000469741 RNF151Q2KHN1 245 aa11.2□□□□□ -0.62
C19orf54-202ENST00000469741 Q6ZUT4 128 aa11.2□□□□□ -0.62
C19orf54-202ENST00000469741 LINC00612Q8N6U2 182 aa11.2□□□□□ -0.62
C19orf54-202ENST00000469741 GAGE12JA6NER3 117 aa11.19□□□□□ -0.62
C19orf54-202ENST00000469741 GAGE4Q13068 117 aa11.19□□□□□ -0.62
C19orf54-202ENST00000469741 GAGE5Q13069 117 aa11.19□□□□□ -0.62
C19orf54-202ENST00000469741 GAGE13Q4V321 117 aa11.19□□□□□ -0.62
C19orf54-202ENST00000469741 NTM-AS1Q6ZSK4 140 aa11.19□□□□□ -0.62
C19orf54-202ENST00000469741 RAB37Q96AX2 223 aa11.19□□□□□ -0.62
C19orf54-202ENST00000469741 SPANXB1Q9NS25 103 aaPredicted RBP11.19□□□□□ -0.62
C19orf54-202ENST00000469741 NHP2Q9NX24 153 aaKnown RBP11.19□□□□□ -0.62
C19orf54-202ENST00000469741 TRGV4A0A0C4DH28 118 aa11.18□□□□□ -0.62
C19orf54-202ENST00000469741 A0A1B0GWB2 263 aa11.18□□□□□ -0.62
C19orf54-202ENST00000469741 UBE2D1P51668 147 aa11.18□□□□□ -0.62
C19orf54-202ENST00000469741 FHL2Q14192 279 aa11.18□□□□□ -0.62
C19orf54-202ENST00000469741 C12orf74Q32Q52 190 aa11.18□□□□□ -0.62
C19orf54-202ENST00000469741 DGAT2L7PQ6IED9 249 aa11.18□□□□□ -0.62
C19orf54-202ENST00000469741 X6R8D5 127 aa11.18□□□□□ -0.62
C19orf54-202ENST00000469741 TIRAPP58753 221 aa11.17□□□□□ -0.62
C19orf54-202ENST00000469741 RNASE13Q5GAN3 156 aaKnown RBP11.17□□□□□ -0.62
C19orf54-202ENST00000469741 KMT2CQ8NEZ4 4911 aaKnown RBP11.17□□□□□ -0.62
C19orf54-202ENST00000469741 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.62
C19orf54-202ENST00000469741 TM2D3Q9BRN9 247 aa11.16□□□□□ -0.62
C19orf54-202ENST00000469741 TMEM238LA0A1B0GVL6 79 aa11.16□□□□□ -0.62
C19orf54-202ENST00000469741 A6NJY4 79 aa11.16□□□□□ -0.62
C19orf54-202ENST00000469741 H7C423 109 aa11.16□□□□□ -0.62
C19orf54-202ENST00000469741 K7ERJ3 54 aa11.16□□□□□ -0.62
C19orf54-202ENST00000469741 FAM19A3Q7Z5A8 133 aa11.16□□□□□ -0.62
C19orf54-202ENST00000469741 IGLV5-45A0A087WSX0 123 aa11.15□□□□□ -0.62
C19orf54-202ENST00000469741 IGHV1-58A0A0C4DH39 117 aa11.15□□□□□ -0.62
C19orf54-202ENST00000469741 IGHV3-30-3P0DP02 117 aa11.15□□□□□ -0.62
C19orf54-202ENST00000469741 GEMIN7Q9H840 131 aaKnown RBP11.15□□□□□ -0.62
C19orf54-202ENST00000469741 LINC00694P0DN24 101 aa11.14□□□□□ -0.63
C19orf54-202ENST00000469741 APOC4P55056 127 aa11.14□□□□□ -0.63
C19orf54-202ENST00000469741 C21orf62-AS1Q17RA5 79 aa11.14□□□□□ -0.63
C19orf54-202ENST00000469741 TMEM243Q9BU79 118 aa11.14□□□□□ -0.63
C19orf54-202ENST00000469741 TENM2Q9NT68 2774 aa11.13□□□□□ -0.63
C19orf54-202ENST00000469741 LOC100131303A0A0U1RQF7 123 aa11.13□□□□□ -0.63
C19orf54-202ENST00000469741 F8W1H4 67 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms