RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 C11orf52Q96A22 123 aa7.75□□□□□ -1.17
TRAPPC12-216ENST00000469400 BTF3L4Q96K17 158 aa7.75□□□□□ -1.17
TRAPPC12-216ENST00000469400 SDHAF1A6NFY7 115 aa7.74□□□□□ -1.17
TRAPPC12-216ENST00000469400 UMAD1C9J7I0 102 aa7.74□□□□□ -1.17
TRAPPC12-216ENST00000469400 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC12-216ENST00000469400 APOMO95445 188 aa7.74□□□□□ -1.17
TRAPPC12-216ENST00000469400 CTRLP40313 264 aa7.74□□□□□ -1.17
TRAPPC12-216ENST00000469400 MEF2BQ02080 365 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC12-216ENST00000469400 LCE2AQ5TA79 106 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC12-216ENST00000469400 IGLV1-50A0A075B6I6 118 aa7.73□□□□□ -1.17
TRAPPC12-216ENST00000469400 RAB19A4D1S5 217 aa7.73□□□□□ -1.17
TRAPPC12-216ENST00000469400 H0Y9J4 135 aa7.73□□□□□ -1.17
TRAPPC12-216ENST00000469400 H2AFB1P0C5Y9 115 aa7.73□□□□□ -1.17
TRAPPC12-216ENST00000469400 EIF5AL1Q6IS14 154 aaKnown RBP7.73□□□□□ -1.17
TRAPPC12-216ENST00000469400 SMIM12Q96EX1 92 aa7.73□□□□□ -1.17
TRAPPC12-216ENST00000469400 CAMK2N2Q96S95 79 aa7.73□□□□□ -1.17
TRAPPC12-216ENST00000469400 CNFNQ9BYD5 112 aa7.73□□□□□ -1.17
TRAPPC12-216ENST00000469400 I3L3M4 83 aa7.72□□□□□ -1.17
TRAPPC12-216ENST00000469400 ESDP10768 282 aa7.72□□□□□ -1.17
TRAPPC12-216ENST00000469400 PMCHP20382 165 aa7.72□□□□□ -1.17
TRAPPC12-216ENST00000469400 GNG4P50150 75 aa7.72□□□□□ -1.17
TRAPPC12-216ENST00000469400 FOXA3P55318 350 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC12-216ENST00000469400 CCL20P78556 96 aa7.72□□□□□ -1.17
TRAPPC12-216ENST00000469400 RPL18AQ02543 176 aaKnown RBP7.72□□□□□ -1.17
TRAPPC12-216ENST00000469400 CDC42SE2Q9NRR3 84 aa7.72□□□□□ -1.17
TRAPPC12-216ENST00000469400 GNG13Q9P2W3 67 aa7.72□□□□□ -1.17
TRAPPC12-216ENST00000469400 A0A087WZ39 114 aa7.71□□□□□ -1.18
TRAPPC12-216ENST00000469400 KRTAP1-4P0C5Y4 121 aa7.71□□□□□ -1.18
TRAPPC12-216ENST00000469400 MALP21145 153 aa7.71□□□□□ -1.18
TRAPPC12-216ENST00000469400 MANBALQ9NQG1 85 aa7.71□□□□□ -1.18
TRAPPC12-216ENST00000469400 COX7A2LO14548 114 aa7.7□□□□□ -1.18
TRAPPC12-216ENST00000469400 TSHBP01222 138 aa7.7□□□□□ -1.18
TRAPPC12-216ENST00000469400 MRPL52Q86TS9 123 aaKnown RBP7.7□□□□□ -1.18
TRAPPC12-216ENST00000469400 KRTAP11-1Q8IUC1 163 aa7.7□□□□□ -1.18
TRAPPC12-216ENST00000469400 NUDT10Q8NFP7 164 aa7.7□□□□□ -1.18
TRAPPC12-216ENST00000469400 MRAP2Q96G30 205 aa7.7□□□□□ -1.18
TRAPPC12-216ENST00000469400 NUDT11Q96G61 164 aa7.7□□□□□ -1.18
TRAPPC12-216ENST00000469400 OPRPNQ99935 248 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC12-216ENST00000469400 TRBV20OR9-2A0A075B6H5 130 aa7.69□□□□□ -1.18
TRAPPC12-216ENST00000469400 NDUFA5Q16718 116 aa7.69□□□□□ -1.18
TRAPPC12-216ENST00000469400 CLLU1Q5K131 121 aa7.69□□□□□ -1.18
TRAPPC12-216ENST00000469400 C2orf48Q96LS8 159 aa7.69□□□□□ -1.18
TRAPPC12-216ENST00000469400 BIN3Q9NQY0 253 aa7.69□□□□□ -1.18
TRAPPC12-216ENST00000469400 TRBV6-5A0A0K0K1A5 114 aa7.68□□□□□ -1.18
TRAPPC12-216ENST00000469400 C1orf196B1AJZ1 125 aa7.68□□□□□ -1.18
TRAPPC12-216ENST00000469400 UBE2D1P51668 147 aa7.68□□□□□ -1.18
TRAPPC12-216ENST00000469400 RAB14P61106 215 aa7.68□□□□□ -1.18
TRAPPC12-216ENST00000469400 ALKAL2Q6UX46 152 aa7.68□□□□□ -1.18
TRAPPC12-216ENST00000469400 SMIM15Q7Z3B0 74 aa7.68□□□□□ -1.18
TRAPPC12-216ENST00000469400 FAM210AQ96ND0 272 aa7.68□□□□□ -1.18
TRAPPC12-216ENST00000469400 TMEM242Q9NWH2 141 aa7.68□□□□□ -1.18
TRAPPC12-216ENST00000469400 TRAV1-1A0A0B4J248 108 aa7.67□□□□□ -1.18
TRAPPC12-216ENST00000469400 FAM168BA1KXE4 195 aa7.67□□□□□ -1.18
TRAPPC12-216ENST00000469400 TSKUQ8WUA8 353 aa7.67□□□□□ -1.18
TRAPPC12-216ENST00000469400 RPP21Q9H633 154 aaKnown RBP7.67□□□□□ -1.18
TRAPPC12-216ENST00000469400 RPL13AP40429 203 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-216ENST00000469400 RNF151Q2KHN1 245 aa7.66□□□□□ -1.18
TRAPPC12-216ENST00000469400 C5orf38Q86SI9 138 aa7.66□□□□□ -1.18
TRAPPC12-216ENST00000469400 RNASE7Q9H1E1 156 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-216ENST00000469400 ST20Q9HBF5 79 aa7.66□□□□□ -1.18
TRAPPC12-216ENST00000469400 MED9Q9NWA0 146 aa7.66□□□□□ -1.18
TRAPPC12-216ENST00000469400 C7orf77A4D0Y5 90 aa7.65□□□□□ -1.18
TRAPPC12-216ENST00000469400 PDE6DO43924 150 aa7.65□□□□□ -1.18
TRAPPC12-216ENST00000469400 SPAG11BQ08648 103 aa7.65□□□□□ -1.18
TRAPPC12-216ENST00000469400 TRAV13-1A0A0B4J241 112 aa7.64□□□□□ -1.19
TRAPPC12-216ENST00000469400 LINC00862A6NCI5 91 aa7.64□□□□□ -1.19
TRAPPC12-216ENST00000469400 POLR2KP53803 58 aaKnown RBP7.64□□□□□ -1.19
TRAPPC12-216ENST00000469400 RNASE13Q5GAN3 156 aaKnown RBP7.64□□□□□ -1.19
TRAPPC12-216ENST00000469400 TRBV27A0A0K0K1C4 114 aa7.63□□□□□ -1.19
TRAPPC12-216ENST00000469400 K7EN84 100 aa7.63□□□□□ -1.19
TRAPPC12-216ENST00000469400 BLOC1S1P78537 153 aa7.63□□□□□ -1.19
TRAPPC12-216ENST00000469400 FAM19A5Q7Z5A7 132 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC12-216ENST00000469400 IMMP2LQ96T52 175 aa7.63□□□□□ -1.19
TRAPPC12-216ENST00000469400 MRPL35Q9NZE8 188 aaKnown RBP7.63□□□□□ -1.19
TRAPPC12-216ENST00000469400 CSDC2Q9Y534 153 aaKnown RBP7.63□□□□□ -1.19
TRAPPC12-216ENST00000469400 TSPAN13O95857 204 aa7.62□□□□□ -1.19
TRAPPC12-216ENST00000469400 KRTAP7-1Q8IUC3 87 aa7.62□□□□□ -1.19
TRAPPC12-216ENST00000469400 CARHSP1Q9Y2V2 147 aaKnown RBP7.62□□□□□ -1.19
TRAPPC12-216ENST00000469400 UBE2D4Q9Y2X8 147 aa7.62□□□□□ -1.19
TRAPPC12-216ENST00000469400 OR10D4PQ8NGN7 298 aa7.61□□□□□ -1.19
TRAPPC12-216ENST00000469400 OCC1Q8TAD7 63 aa7.61□□□□□ -1.19
TRAPPC12-216ENST00000469400 TEX46H3BTG2 121 aa7.6□□□□□ -1.19
TRAPPC12-216ENST00000469400 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
TRAPPC12-216ENST00000469400 UBE2BP63146 152 aa7.6□□□□□ -1.19
TRAPPC12-216ENST00000469400 GAGE2EQ4V326 116 aa7.6□□□□□ -1.19
TRAPPC12-216ENST00000469400 C10orf25Q5T742 122 aa7.6□□□□□ -1.19
TRAPPC12-216ENST00000469400 GAGE2DQ9UEU5 116 aa7.6□□□□□ -1.19
TRAPPC12-216ENST00000469400 F8WDY8 70 aa7.59□□□□□ -1.19
TRAPPC12-216ENST00000469400 M0QXV9 152 aa7.59□□□□□ -1.19
TRAPPC12-216ENST00000469400 VCYO14598 125 aa7.59□□□□□ -1.19
TRAPPC12-216ENST00000469400 NDUFA1O15239 70 aa7.59□□□□□ -1.19
TRAPPC12-216ENST00000469400 FCER1GP30273 86 aa7.59□□□□□ -1.19
TRAPPC12-216ENST00000469400 Q6ZUT4 128 aa7.59□□□□□ -1.19
TRAPPC12-216ENST00000469400 ORAOV1Q8WV07 137 aa7.59□□□□□ -1.19
TRAPPC12-216ENST00000469400 SMAGPQ0VAQ4 97 aa7.58□□□□□ -1.2
TRAPPC12-216ENST00000469400 TMEM241Q24JQ0 296 aa7.58□□□□□ -1.2
TRAPPC12-216ENST00000469400 UNQ6190/PRO20217Q6UXQ8 127 aa7.58□□□□□ -1.2
TRAPPC12-216ENST00000469400 SMDT1Q9H4I9 107 aa7.58□□□□□ -1.2
TRAPPC12-216ENST00000469400 C6orf48Q9UBA6 75 aa7.58□□□□□ -1.2
TRAPPC12-216ENST00000469400 A8MWL6 223 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms