RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 ESDP10768 282 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 PMCHP20382 165 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 G0S2P27469 103 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 RPS10P46783 165 aaKnown RBP2.37□□□□□ -2.03
TRIM59-202ENST00000468542 AMTP48728 403 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 MIAQ16674 131 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 Q6ZRN7 208 aaPredicted RBP2.37□□□□□ -2.03
TRIM59-202ENST00000468542 TMEM136Q6ZRR5 245 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 TMEM18Q96B42 140 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 RPL39LQ96EH5 51 aaKnown RBP2.37□□□□□ -2.03
TRIM59-202ENST00000468542 PRELID3AQ96N28 172 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 YPEL4Q96NS1 127 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 CHCHD5Q9BSY4 110 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 TIMM21Q9BVV7 248 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 TM2D2Q9BX73 214 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 NXT2Q9NPJ8 142 aaKnown RBP2.37□□□□□ -2.03
TRIM59-202ENST00000468542 SMCO4Q9NRQ5 59 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 SPANXA1Q9NS26 97 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 UBE2L6O14933 153 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 CCL25O15444 150 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 GAS8-AS1O95177 125 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 NPYP01303 97 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 FGF6P10767 208 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 RAB5AP20339 215 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 FCER1GP30273 86 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 RBX1P62877 108 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 ORMDL2Q53FV1 153 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 MPV17L2Q567V2 206 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 C20orf203Q8NBC4 194 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 MAP1LC3AQ9H492 121 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 PYGO1Q9Y3Y4 419 aa2.36□□□□□ -2.03
TRIM59-202ENST00000468542 TGIF2-C20orf24A0A0A6YYL0 155 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 A0A1B0GVY2 172 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 PRSS29PA6NIE9 313 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 TMEM262E9PQX1 116 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 SMKR1H3BMG3 65 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 M0R2N4 97 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 IGHV3-30P01768 117 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 IGHV3-33P01772 117 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 CRPP02741 224 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 ANGP03950 147 aaKnown RBP2.35□□□□□ -2.03
TRIM59-202ENST00000468542 IGHV3-30-3P0DP02 117 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 IGHV3-30-5P0DP03 117 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 MRPS36P82909 103 aaKnown RBP2.35□□□□□ -2.03
TRIM59-202ENST00000468542 REG3AQ06141 175 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 PAPPA-AS1Q5QFB9 102 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 AMMECR1LQ6DCA0 310 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 ENHOQ6UWT2 76 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 SLC7A5P1Q8MH63 180 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 Q8N8P6 123 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 OR5A1Q8NGJ0 315 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 NTN5Q8WTR8 489 aaPredicted RBP2.35□□□□□ -2.03
TRIM59-202ENST00000468542 TMEM101Q96IK0 257 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 ALKBH7Q9BT30 221 aaPredicted RBP2.35□□□□□ -2.03
TRIM59-202ENST00000468542 C1orf43Q9BWL3 253 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 CDC42SE2Q9NRR3 84 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 KLK12Q9UKR0 248 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 UBE2D4Q9Y2X8 147 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 APOBP04114 4563 aaKnown RBP2.35□□□□□ -2.03
TRIM59-202ENST00000468542 HSPG2P98160 4391 aa2.35□□□□□ -2.03
TRIM59-202ENST00000468542 IGLV4-60A0A075B6I1 120 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 LRCOL1A6NCL2 159 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 C1orf196B1AJZ1 125 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 PSCAO43653 123 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 S100A1P23297 94 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 IFI27P40305 119 aaPredicted RBP2.34□□□□□ -2.03
TRIM59-202ENST00000468542 RAB5BP61020 215 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 FABP9Q0Z7S8 132 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 GAGE6Q13070 117 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 C14orf177Q52M58 125 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 DGAT2L7PQ6IED9 249 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 CBLN2Q8IUK8 224 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 LINC00269Q8N2A0 174 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 ZNF664Q8N3J9 261 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 Q8N976 141 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 UBE2WQ96B02 151 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 TIMM17AQ99595 171 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 CYSLTR1Q9Y271 337 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 TRAPPC1Q9Y5R8 145 aa2.34□□□□□ -2.03
TRIM59-202ENST00000468542 EPPK1P58107 5090 aaKnown RBP2.33□□□□□ -2.04
TRIM59-202ENST00000468542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.33□□□□□ -2.04
TRIM59-202ENST00000468542 A0A087WTM6 91 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 IGKV2-29A2NJV5 120 aaPredicted RBP2.33□□□□□ -2.04
TRIM59-202ENST00000468542 IGIPA6NJ69 53 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 COLCA2A8K830 154 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 SEC11AP67812 179 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 RNASEKQ6P5S7 137 aaKnown RBP2.33□□□□□ -2.04
TRIM59-202ENST00000468542 CFAP161Q6P656 301 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 KRTAP26-1Q6PEX3 210 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 CD164L2Q6UWJ8 174 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 C2orf66Q6UXQ4 117 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 Q6ZN92 141 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 ERASQ7Z444 233 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 Q8N814 137 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 PRSS3P2Q8NHM4 247 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 C18orf32Q8TCD1 76 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 TOMM6Q96B49 74 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 CHCHD1Q96BP2 118 aaKnown RBP2.33□□□□□ -2.04
TRIM59-202ENST00000468542 TMEM141Q96I45 108 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 1143.5 ms