RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 CFC1P0CG37 223 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 GAGE5Q13069 117 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 GAGE6Q13070 117 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 FBN3Q75N90 2809 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 IGHV3-38A0A0C4DH36 116 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 TRBV6-1A0A0K0K1D8 114 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 PRSS47A8MTI9 375 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 IFITM1P13164 125 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 Q6ZUT4 128 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 HHLA3Q9XRX5 114 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 A0A0J9YXV3 536 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 GAGE12JA6NER3 117 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 GAGE7O76087 117 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 GAGE12FP0CL80 117 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 GAGE12GP0CL81 117 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 GAGE12IP0CL82 117 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 GAGE4Q13068 117 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 MUSTN1Q8IVN3 82 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 RBAKDNA6NC62 111 aa4.42□□□□□ -1.7
SHQ1-205ENST00000468371 GATD1Q8NB37 220 aa4.42□□□□□ -1.7
SHQ1-205ENST00000468371 MAP6D1Q9H9H5 199 aa4.42□□□□□ -1.7
SHQ1-205ENST00000468371 IGHV3-16A0A0C4DH30 117 aa4.42□□□□□ -1.7
SHQ1-205ENST00000468371 A0A0J9YWU9 116 aa4.42□□□□□ -1.7
SHQ1-205ENST00000468371 C11orf21Q9P2W6 132 aa4.42□□□□□ -1.7
SHQ1-205ENST00000468371 TRAV13-1A0A0B4J241 112 aa4.42□□□□□ -1.7
SHQ1-205ENST00000468371 UBE2L6O14933 153 aa4.42□□□□□ -1.7
SHQ1-205ENST00000468371 DAND5Q8N907 189 aa4.42□□□□□ -1.7
SHQ1-205ENST00000468371 TRBV7-9A0A0J9YWB2 115 aa4.41□□□□□ -1.7
SHQ1-205ENST00000468371 IGHV3-53P01767 116 aa4.41□□□□□ -1.7
SHQ1-205ENST00000468371 CARD19Q96LW7 228 aa4.41□□□□□ -1.7
SHQ1-205ENST00000468371 NDUFA12Q9UI09 145 aa4.41□□□□□ -1.7
SHQ1-205ENST00000468371 XGP55808 180 aa4.41□□□□□ -1.7
SHQ1-205ENST00000468371 SUMO4Q6EEV6 95 aa4.41□□□□□ -1.7
SHQ1-205ENST00000468371 TOMM6Q96B49 74 aa4.41□□□□□ -1.7
SHQ1-205ENST00000468371 TMEM141Q96I45 108 aa4.41□□□□□ -1.7
SHQ1-205ENST00000468371 RASL10AQ92737 203 aa4.41□□□□□ -1.7
SHQ1-205ENST00000468371 TRAV12-1A0A0B4J245 112 aa4.4□□□□□ -1.7
SHQ1-205ENST00000468371 MRGPRG-AS1Q2M3A8 158 aa4.4□□□□□ -1.7
SHQ1-205ENST00000468371 KPRPQ5T749 579 aaPredicted RBP4.4□□□□□ -1.7
SHQ1-205ENST00000468371 GAGE2AQ6NT46 116 aa4.4□□□□□ -1.7
SHQ1-205ENST00000468371 CSMD2Q7Z408 3487 aa4.4□□□□□ -1.7
SHQ1-205ENST00000468371 C11orf68Q9H3H3 251 aaKnown RBP4.4□□□□□ -1.71
SHQ1-205ENST00000468371 EDA2RQ9HAV5 297 aa4.4□□□□□ -1.71
SHQ1-205ENST00000468371 MIFP14174 115 aa4.4□□□□□ -1.71
SHQ1-205ENST00000468371 C16orf54Q6UWD8 224 aa4.4□□□□□ -1.71
SHQ1-205ENST00000468371 FBN1P35555 2871 aaKnown RBP4.4□□□□□ -1.71
SHQ1-205ENST00000468371 DEFB131BA0A096LNP1 70 aa4.39□□□□□ -1.71
SHQ1-205ENST00000468371 TEX49A0A1B0GTD5 131 aa4.39□□□□□ -1.71
SHQ1-205ENST00000468371 CCL18P55774 89 aa4.39□□□□□ -1.71
SHQ1-205ENST00000468371 LINC01620Q4KN68 170 aa4.39□□□□□ -1.71
SHQ1-205ENST00000468371 C9orf153Q5TBE3 101 aa4.39□□□□□ -1.71
SHQ1-205ENST00000468371 CEMP1Q6PRD7 247 aaPredicted RBP4.39□□□□□ -1.71
SHQ1-205ENST00000468371 CLEC2BQ92478 149 aa4.39□□□□□ -1.71
SHQ1-205ENST00000468371 TRAV10A0A0B4J240 114 aa4.39□□□□□ -1.71
SHQ1-205ENST00000468371 TRGV4A0A0C4DH28 118 aa4.39□□□□□ -1.71
SHQ1-205ENST00000468371 I3L3M4 83 aa4.39□□□□□ -1.71
SHQ1-205ENST00000468371 NRACQ8N912 160 aa4.39□□□□□ -1.71
SHQ1-205ENST00000468371 NEXN-AS1Q8NBZ9 246 aa4.39□□□□□ -1.71
SHQ1-205ENST00000468371 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.39□□□□□ -1.71
SHQ1-205ENST00000468371 IGKV2-29A2NJV5 120 aaPredicted RBP4.39□□□□□ -1.71
SHQ1-205ENST00000468371 TRBV7-3A0A075B6L6 115 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 PRR9Q5T870 116 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 CFAP126Q5VTH2 177 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 TMEM101Q96IK0 257 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 TRGV11A0A075B6L2 103 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 TRGV1A0A0A0MS02 117 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 A0A0J9YY99 117 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 F8W735 103 aaPredicted RBP4.38□□□□□ -1.71
SHQ1-205ENST00000468371 K7EQG2 157 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 LINC00158P58513 81 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 C9orf47Q6ZRZ4 202 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 IGHV1OR15-1A0A075B7D0 117 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 MRPS12O15235 138 aaKnown RBP4.38□□□□□ -1.71
SHQ1-205ENST00000468371 NANOS2P60321 138 aaKnown RBP4.38□□□□□ -1.71
SHQ1-205ENST00000468371 ODF3L2Q3SX64 289 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 Q8N1Y9 231 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 C20orf173Q96LM9 149 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 MDFICQ9P1T7 246 aa4.38□□□□□ -1.71
SHQ1-205ENST00000468371 ATP5G1P05496 136 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 HIST1H4AP62805 103 aaKnown RBP4.37□□□□□ -1.71
SHQ1-205ENST00000468371 SMIM9A6NGZ8 99 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 EDN2P20800 178 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 NFE4Q86UQ8 179 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 RBMY1BA6NDE4 496 aaKnown RBP4.37□□□□□ -1.71
SHQ1-205ENST00000468371 RBMY1EA6NEQ0 496 aaKnown RBP4.37□□□□□ -1.71
SHQ1-205ENST00000468371 LEPROTO15243 131 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 RBMY1DP0C7P1 496 aaKnown RBP4.37□□□□□ -1.71
SHQ1-205ENST00000468371 ATP6V0E2Q8NHE4 81 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 COPS9Q8WXC6 57 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 TENM1Q9UKZ4 2725 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 TRAV4A0A0B4J268 109 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 P0DMU3 169 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 FAM231AP0DMU4 169 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 FAM231CP0DMU5 169 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 HERV-K104P63124 156 aa4.37□□□□□ -1.71
SHQ1-205ENST00000468371 IGHV4-28A0A0C4DH34 117 aa4.36□□□□□ -1.71
SHQ1-205ENST00000468371 PAX4O43316 350 aa4.36□□□□□ -1.71
SHQ1-205ENST00000468371 NDUFV3P56181 108 aaKnown RBP4.36□□□□□ -1.71
SHQ1-205ENST00000468371 CHCHD5Q9BSY4 110 aa4.36□□□□□ -1.71
SHQ1-205ENST00000468371 ICOSQ9Y6W8 199 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms