RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 TRAV22A0A0B4J277 110 aa0.63□□□□□ -2.31
SMC4-208ENST00000467468 APOC3P02656 99 aa0.63□□□□□ -2.31
SMC4-208ENST00000467468 PSME4Q14997 1843 aa0.62□□□□□ -2.31
SMC4-208ENST00000467468 LRRC37A2A6NM11 1700 aa0.62□□□□□ -2.31
SMC4-208ENST00000467468 TRAV30A0A087WSZ9 112 aa0.62□□□□□ -2.31
SMC4-208ENST00000467468 SFT2D2O95562 160 aa0.62□□□□□ -2.31
SMC4-208ENST00000467468 SNCAP37840 140 aa0.62□□□□□ -2.31
SMC4-208ENST00000467468 UBE2D3P61077 147 aa0.62□□□□□ -2.31
SMC4-208ENST00000467468 UBE2D2P62837 147 aa0.62□□□□□ -2.31
SMC4-208ENST00000467468 Q0VG73 95 aa0.62□□□□□ -2.31
SMC4-208ENST00000467468 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
SMC4-208ENST00000467468 KIF21AQ7Z4S6 1674 aa0.62□□□□□ -2.31
SMC4-208ENST00000467468 ZNF236Q9UL36 1845 aa0.61□□□□□ -2.31
SMC4-208ENST00000467468 NXT2Q9NPJ8 142 aaKnown RBP0.61□□□□□ -2.31
SMC4-208ENST00000467468 MANBALQ9NQG1 85 aa0.61□□□□□ -2.31
SMC4-208ENST00000467468 PI4KAP42356 2102 aa0.61□□□□□ -2.31
SMC4-208ENST00000467468 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
SMC4-208ENST00000467468 TET3O43151 1660 aa0.6□□□□□ -2.31
SMC4-208ENST00000467468 KRTDAPP60985 99 aa0.6□□□□□ -2.31
SMC4-208ENST00000467468 HMGXB3Q12766 1538 aa0.59□□□□□ -2.31
SMC4-208ENST00000467468 ARHGEF5Q12774 1597 aa0.59□□□□□ -2.31
SMC4-208ENST00000467468 A0A0D9SFI3 127 aa0.59□□□□□ -2.31
SMC4-208ENST00000467468 COX6CP09669 75 aa0.59□□□□□ -2.31
SMC4-208ENST00000467468 HAMPP81172 84 aa0.59□□□□□ -2.31
SMC4-208ENST00000467468 ACBD7Q8N6N7 88 aa0.59□□□□□ -2.31
SMC4-208ENST00000467468 PRO1854Q9UHT4 67 aa0.59□□□□□ -2.31
SMC4-208ENST00000467468 CC2D2AQ9P2K1 1620 aa0.59□□□□□ -2.32
SMC4-208ENST00000467468 ABCC5O15440 1437 aa0.58□□□□□ -2.32
SMC4-208ENST00000467468 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
SMC4-208ENST00000467468 CNFNQ9BYD5 112 aa0.58□□□□□ -2.32
SMC4-208ENST00000467468 APCP25054 2843 aa0.58□□□□□ -2.32
SMC4-208ENST00000467468 KDM3BQ7LBC6 1761 aa0.57□□□□□ -2.32
SMC4-208ENST00000467468 hADV29S1A0JD25 119 aa0.57□□□□□ -2.32
SMC4-208ENST00000467468 CRYM-AS1A6NIL9 109 aa0.57□□□□□ -2.32
SMC4-208ENST00000467468 MGPP08493 103 aa0.57□□□□□ -2.32
SMC4-208ENST00000467468 IGLC1P0CG04 106 aa0.57□□□□□ -2.32
SMC4-208ENST00000467468 Q6JHZ5 121 aa0.57□□□□□ -2.32
SMC4-208ENST00000467468 SPRR4Q96PI1 79 aa0.57□□□□□ -2.32
SMC4-208ENST00000467468 ARL2-SNX15V9GYD0 113 aa0.57□□□□□ -2.32
SMC4-208ENST00000467468 NAV3Q8IVL0 2385 aa0.57□□□□□ -2.32
SMC4-208ENST00000467468 EHBP1L1Q8N3D4 1523 aa0.57□□□□□ -2.32
SMC4-208ENST00000467468 LRP6O75581 1613 aa0.56□□□□□ -2.32
SMC4-208ENST00000467468 CNTLNQ9NXG0 1405 aa0.56□□□□□ -2.32
SMC4-208ENST00000467468 SHANK2Q9UPX8 1470 aa0.56□□□□□ -2.32
SMC4-208ENST00000467468 TRAPPC2P0DI81 140 aa0.56□□□□□ -2.32
SMC4-208ENST00000467468 TRAPPC2BP0DI82 140 aa0.56□□□□□ -2.32
SMC4-208ENST00000467468 S100A10P60903 97 aa0.56□□□□□ -2.32
SMC4-208ENST00000467468 FAM223AQ8IWN6 122 aa0.56□□□□□ -2.32
SMC4-208ENST00000467468 FAIMQ9NVQ4 179 aa0.56□□□□□ -2.32
SMC4-208ENST00000467468 WNK3Q9BYP7 1800 aa0.56□□□□□ -2.32
SMC4-208ENST00000467468 DIP2CQ9Y2E4 1556 aa0.56□□□□□ -2.32
SMC4-208ENST00000467468 RAPGEF6Q8TEU7 1601 aa0.56□□□□□ -2.32
SMC4-208ENST00000467468 KDM5AP29375 1690 aaKnown RBP0.56□□□□□ -2.32
SMC4-208ENST00000467468 SBF2Q86WG5 1849 aa0.55□□□□□ -2.32
SMC4-208ENST00000467468 TNCP24821 2201 aa0.55□□□□□ -2.32
SMC4-208ENST00000467468 BCE1O60756 84 aa0.55□□□□□ -2.32
SMC4-208ENST00000467468 SEC11AP67812 179 aa0.55□□□□□ -2.32
SMC4-208ENST00000467468 PLXNB2O15031 1838 aa0.54□□□□□ -2.32
SMC4-208ENST00000467468 MRC2Q9UBG0 1479 aa0.54□□□□□ -2.32
SMC4-208ENST00000467468 CADP27708 2225 aa0.54□□□□□ -2.32
SMC4-208ENST00000467468 TOPAZ1Q8N9V7 1692 aa0.54□□□□□ -2.32
SMC4-208ENST00000467468 C10orf142B7Z368 130 aa0.54□□□□□ -2.32
SMC4-208ENST00000467468 S100A3P33764 101 aa0.54□□□□□ -2.32
SMC4-208ENST00000467468 TMEM263Q8WUH6 116 aaKnown RBP0.54□□□□□ -2.32
SMC4-208ENST00000467468 TCHHQ07283 1943 aa0.54□□□□□ -2.32
SMC4-208ENST00000467468 LAMC1P11047 1609 aa0.53□□□□□ -2.32
SMC4-208ENST00000467468 SFTA2Q6UW10 78 aa0.53□□□□□ -2.32
SMC4-208ENST00000467468 VPS8Q8N3P4 1428 aa0.53□□□□□ -2.32
SMC4-208ENST00000467468 ERCC6L2Q5T890 1561 aa0.53□□□□□ -2.33
SMC4-208ENST00000467468 GNGT2O14610 69 aa0.52□□□□□ -2.33
SMC4-208ENST00000467468 MPC2O95563 127 aa0.52□□□□□ -2.33
SMC4-208ENST00000467468 MT-ATP8P03928 68 aa0.52□□□□□ -2.33
SMC4-208ENST00000467468 Q5BKY6 102 aa0.52□□□□□ -2.33
SMC4-208ENST00000467468 PRO0255Q9UI72 69 aa0.52□□□□□ -2.33
SMC4-208ENST00000467468 SPCS1Q9Y6A9 102 aa0.52□□□□□ -2.33
SMC4-208ENST00000467468 NSD3Q9BZ95 1437 aa0.52□□□□□ -2.33
SMC4-208ENST00000467468 CHD1O14646 1710 aa0.52□□□□□ -2.33
SMC4-208ENST00000467468 ABCA3Q99758 1704 aa0.52□□□□□ -2.33
SMC4-208ENST00000467468 MYO7AQ13402 2215 aa0.52□□□□□ -2.33
SMC4-208ENST00000467468 M0R143 59 aa0.51□□□□□ -2.33
SMC4-208ENST00000467468 M0R3E3 92 aa0.51□□□□□ -2.33
SMC4-208ENST00000467468 NDUFC1O43677 76 aa0.51□□□□□ -2.33
SMC4-208ENST00000467468 SAA2P0DJI9 122 aaPredicted RBP0.51□□□□□ -2.33
SMC4-208ENST00000467468 TOP2BQ02880 1626 aa0.51□□□□□ -2.33
SMC4-208ENST00000467468 NCMAPQ5T1S8 102 aa0.51□□□□□ -2.33
SMC4-208ENST00000467468 TTC28Q96AY4 2481 aa0.5□□□□□ -2.33
SMC4-208ENST00000467468 PRDM15P57071 1507 aaPredicted RBP0.5□□□□□ -2.33
SMC4-208ENST00000467468 ADGRL2O95490 1459 aa0.5□□□□□ -2.33
SMC4-208ENST00000467468 TEX14Q8IWB6 1497 aa0.5□□□□□ -2.33
SMC4-208ENST00000467468 FAM223BA6NKX1 122 aa0.5□□□□□ -2.33
SMC4-208ENST00000467468 S100A8P05109 93 aa0.5□□□□□ -2.33
SMC4-208ENST00000467468 AP4S1Q9Y587 144 aa0.5□□□□□ -2.33
SMC4-208ENST00000467468 COL4A6Q14031 1691 aa0.49□□□□□ -2.33
SMC4-208ENST00000467468 CACNA1HO95180 2353 aa0.49□□□□□ -2.33
SMC4-208ENST00000467468 GAPVD1Q14C86 1478 aa0.49□□□□□ -2.33
SMC4-208ENST00000467468 BDP1A6H8Y1 2624 aa0.49□□□□□ -2.33
SMC4-208ENST00000467468 LINC00032P0C843 101 aa0.49□□□□□ -2.33
SMC4-208ENST00000467468 UBA52P62987 128 aaKnown RBP0.49□□□□□ -2.33
SMC4-208ENST00000467468 C10orf113Q5VZT2 155 aa0.49□□□□□ -2.33
SMC4-208ENST00000467468 DPY30Q9C005 99 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms