RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 MRPL52Q86TS9 123 aaKnown RBP8.6□□□□□ -1.03
HDLBP-231ENST00000467435 VSIG2Q96IQ7 327 aa8.6□□□□□ -1.03
HDLBP-231ENST00000467435 C2orf88Q9BSF0 95 aa8.6□□□□□ -1.03
HDLBP-231ENST00000467435 CHAC1Q9BUX1 264 aa8.6□□□□□ -1.03
HDLBP-231ENST00000467435 IGKV2D-26A0A0A0MRZ7 120 aa8.59□□□□□ -1.03
HDLBP-231ENST00000467435 TRBV6-8A0A0A6YYG3 113 aa8.59□□□□□ -1.03
HDLBP-231ENST00000467435 A0A0J9YWU9 116 aa8.59□□□□□ -1.03
HDLBP-231ENST00000467435 H7C423 109 aa8.59□□□□□ -1.03
HDLBP-231ENST00000467435 DEFB121Q5J5C9 76 aa8.59□□□□□ -1.03
HDLBP-231ENST00000467435 AMMECR1LQ6DCA0 310 aa8.59□□□□□ -1.03
HDLBP-231ENST00000467435 A0A096LPF7 62 aa8.58□□□□□ -1.04
HDLBP-231ENST00000467435 NFE4Q86UQ8 179 aa8.58□□□□□ -1.04
HDLBP-231ENST00000467435 TM2D3Q9BRN9 247 aa8.58□□□□□ -1.04
HDLBP-231ENST00000467435 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
HDLBP-231ENST00000467435 COL6A5A8TX70 2615 aa8.58□□□□□ -1.04
HDLBP-231ENST00000467435 A0A0J9YXV3 536 aa8.57□□□□□ -1.04
HDLBP-231ENST00000467435 HERVK_113P61574 105 aa8.57□□□□□ -1.04
HDLBP-231ENST00000467435 CTAG1AP78358 180 aa8.57□□□□□ -1.04
HDLBP-231ENST00000467435 GAGE6Q13070 117 aa8.57□□□□□ -1.04
HDLBP-231ENST00000467435 TMEM170BQ5T4T1 132 aa8.57□□□□□ -1.04
HDLBP-231ENST00000467435 PCP2Q8IVA1 136 aa8.57□□□□□ -1.04
HDLBP-231ENST00000467435 OR5A1Q8NGJ0 315 aa8.57□□□□□ -1.04
HDLBP-231ENST00000467435 MRAPQ8TCY5 172 aa8.57□□□□□ -1.04
HDLBP-231ENST00000467435 TMEM101Q96IK0 257 aa8.57□□□□□ -1.04
HDLBP-231ENST00000467435 CHCHD5Q9BSY4 110 aa8.57□□□□□ -1.04
HDLBP-231ENST00000467435 E9PLD3 99 aa8.56□□□□□ -1.04
HDLBP-231ENST00000467435 DLEU1O43261 78 aa8.56□□□□□ -1.04
HDLBP-231ENST00000467435 ZNF25P17030 456 aaPredicted RBP8.56□□□□□ -1.04
HDLBP-231ENST00000467435 Q6ZTC4 211 aa8.56□□□□□ -1.04
HDLBP-231ENST00000467435 BOD1L2Q8IYS8 172 aa8.56□□□□□ -1.04
HDLBP-231ENST00000467435 ICOSQ9Y6W8 199 aa8.56□□□□□ -1.04
HDLBP-231ENST00000467435 EREGO14944 169 aa8.55□□□□□ -1.04
HDLBP-231ENST00000467435 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-231ENST00000467435 UBE2D1P51668 147 aa8.55□□□□□ -1.04
HDLBP-231ENST00000467435 MRPL23Q16540 153 aaKnown RBP8.55□□□□□ -1.04
HDLBP-231ENST00000467435 MRPS16Q9Y3D3 137 aaKnown RBP8.55□□□□□ -1.04
HDLBP-231ENST00000467435 TRAV8-6A0A0B4J262 113 aa8.54□□□□□ -1.04
HDLBP-231ENST00000467435 TINCRA0A1B0GVN0 87 aa8.54□□□□□ -1.04
HDLBP-231ENST00000467435 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
HDLBP-231ENST00000467435 SH2D6Q7Z4S9 175 aa8.54□□□□□ -1.04
HDLBP-231ENST00000467435 C11orf45Q8TAV5 145 aa8.54□□□□□ -1.04
HDLBP-231ENST00000467435 TTTY13Q9BZ97 58 aa8.54□□□□□ -1.04
HDLBP-231ENST00000467435 CDC42SE2Q9NRR3 84 aa8.54□□□□□ -1.04
HDLBP-231ENST00000467435 TMEM223A0PJW6 202 aa8.53□□□□□ -1.04
HDLBP-231ENST00000467435 M0R143 59 aa8.53□□□□□ -1.04
HDLBP-231ENST00000467435 NANOS2P60321 138 aaKnown RBP8.53□□□□□ -1.04
HDLBP-231ENST00000467435 SNHG12Q9BXW3 62 aa8.53□□□□□ -1.04
HDLBP-231ENST00000467435 PKD1L1Q8TDX9 2849 aa8.52□□□□□ -1.05
HDLBP-231ENST00000467435 GEMIN7Q9H840 131 aaKnown RBP8.52□□□□□ -1.05
HDLBP-231ENST00000467435 IGLV4-60A0A075B6I1 120 aa8.51□□□□□ -1.05
HDLBP-231ENST00000467435 TRAV13-1A0A0B4J241 112 aa8.51□□□□□ -1.05
HDLBP-231ENST00000467435 H3BNG1 76 aa8.51□□□□□ -1.05
HDLBP-231ENST00000467435 SIVA1O15304 175 aa8.51□□□□□ -1.05
HDLBP-231ENST00000467435 BATFQ16520 125 aa8.51□□□□□ -1.05
HDLBP-231ENST00000467435 LINC00469Q8N7U9 141 aa8.51□□□□□ -1.05
HDLBP-231ENST00000467435 MAPKAPK5-AS1Q8N8E1 139 aa8.51□□□□□ -1.05
HDLBP-231ENST00000467435 DEFB131BA0A096LNP1 70 aa8.5□□□□□ -1.05
HDLBP-231ENST00000467435 MYMXA0A1B0GTQ4 84 aa8.5□□□□□ -1.05
HDLBP-231ENST00000467435 TMEM262E9PQX1 116 aa8.5□□□□□ -1.05
HDLBP-231ENST00000467435 LEPROTO15243 131 aa8.5□□□□□ -1.05
HDLBP-231ENST00000467435 TIRAPP58753 221 aa8.5□□□□□ -1.05
HDLBP-231ENST00000467435 HERVK_113P63121 156 aa8.5□□□□□ -1.05
HDLBP-231ENST00000467435 SEC11AP67812 179 aa8.5□□□□□ -1.05
HDLBP-231ENST00000467435 MPV17L2Q567V2 206 aa8.5□□□□□ -1.05
HDLBP-231ENST00000467435 LINC00242Q5T6M2 205 aa8.5□□□□□ -1.05
HDLBP-231ENST00000467435 FAM19A3Q7Z5A8 133 aa8.5□□□□□ -1.05
HDLBP-231ENST00000467435 NBEAL2Q6ZNJ1 2754 aa8.5□□□□□ -1.05
HDLBP-231ENST00000467435 IGHV3-64A0A075B6Q5 118 aa8.49□□□□□ -1.05
HDLBP-231ENST00000467435 IGLV5-45A0A087WSX0 123 aa8.49□□□□□ -1.05
HDLBP-231ENST00000467435 ZNF815PA8K554 130 aa8.49□□□□□ -1.05
HDLBP-231ENST00000467435 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
HDLBP-231ENST00000467435 HINT1P49773 126 aaPredicted RBP8.49□□□□□ -1.05
HDLBP-231ENST00000467435 TSPEAR-AS2P59090 65 aa8.49□□□□□ -1.05
HDLBP-231ENST00000467435 RBX1P62877 108 aa8.49□□□□□ -1.05
HDLBP-231ENST00000467435 LELP1Q5T871 98 aa8.49□□□□□ -1.05
HDLBP-231ENST00000467435 HIGD1BQ9P298 99 aa8.49□□□□□ -1.05
HDLBP-231ENST00000467435 IGKV3OR2-268A0A0C4DH90 116 aa8.48□□□□□ -1.05
HDLBP-231ENST00000467435 A0A1B0GUV1 79 aa8.48□□□□□ -1.05
HDLBP-231ENST00000467435 H3BRM9 83 aa8.48□□□□□ -1.05
HDLBP-231ENST00000467435 J3QQQ9 107 aa8.48□□□□□ -1.05
HDLBP-231ENST00000467435 PLEKHB2Q96CS7 222 aa8.48□□□□□ -1.05
HDLBP-231ENST00000467435 CDKN2A-AS1Q9UH64 79 aa8.48□□□□□ -1.05
HDLBP-231ENST00000467435 TRAV10A0A0B4J240 114 aa8.47□□□□□ -1.05
HDLBP-231ENST00000467435 IGHV1-58A0A0C4DH39 117 aa8.47□□□□□ -1.05
HDLBP-231ENST00000467435 SPINK8P0C7L1 97 aa8.47□□□□□ -1.05
HDLBP-231ENST00000467435 COX6A2Q02221 97 aa8.47□□□□□ -1.05
HDLBP-231ENST00000467435 HSD52Q0P140 79 aa8.47□□□□□ -1.05
HDLBP-231ENST00000467435 LBHQ53QV2 105 aaPredicted RBP8.47□□□□□ -1.05
HDLBP-231ENST00000467435 B9D2Q9BPU9 175 aa8.47□□□□□ -1.05
HDLBP-231ENST00000467435 HUWE1Q7Z6Z7 4374 aaKnown RBP8.46□□□□□ -1.05
HDLBP-231ENST00000467435 TRAV8-3A0A0A6YYJ7 113 aa8.46□□□□□ -1.06
HDLBP-231ENST00000467435 IGHV3-30-3P0DP02 117 aa8.46□□□□□ -1.06
HDLBP-231ENST00000467435 LYPD5Q6UWN5 251 aa8.46□□□□□ -1.06
HDLBP-231ENST00000467435 BVES-AS1Q5T3Y7 98 aa8.45□□□□□ -1.06
HDLBP-231ENST00000467435 CLPSL2Q6UWE3 100 aa8.45□□□□□ -1.06
HDLBP-231ENST00000467435 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
HDLBP-231ENST00000467435 SCGB1D4Q6XE38 83 aa8.44□□□□□ -1.06
HDLBP-231ENST00000467435 Q8N3U1 123 aa8.44□□□□□ -1.06
HDLBP-231ENST00000467435 SMIM1B2RUZ4 78 aa8.43□□□□□ -1.06
HDLBP-231ENST00000467435 ANGP03950 147 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms