RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 CFHR3Q02985 330 aa13.27□□□□□ -0.29
SNAPC3-205ENST00000467062 KIF25-AS1Q9Y6Z4 181 aa13.27□□□□□ -0.29
SNAPC3-205ENST00000467062 TRAV12-2A0A075B6T6 113 aa13.26□□□□□ -0.29
SNAPC3-205ENST00000467062 LINC00315P59091 139 aa13.26□□□□□ -0.29
SNAPC3-205ENST00000467062 SUMO4Q6EEV6 95 aa13.26□□□□□ -0.29
SNAPC3-205ENST00000467062 TRAV12-3A0A0B4J271 114 aa13.26□□□□□ -0.29
SNAPC3-205ENST00000467062 RHOHQ15669 191 aa13.26□□□□□ -0.29
SNAPC3-205ENST00000467062 A0A0J9YXV3 536 aa13.25□□□□□ -0.29
SNAPC3-205ENST00000467062 H3BUA1 57 aa13.25□□□□□ -0.29
SNAPC3-205ENST00000467062 ADAMTSL4-AS1Q5T5F5 129 aa13.25□□□□□ -0.29
SNAPC3-205ENST00000467062 Q6ZSV7 163 aa13.25□□□□□ -0.29
SNAPC3-205ENST00000467062 DAND5Q8N907 189 aa13.25□□□□□ -0.29
SNAPC3-205ENST00000467062 ADARB2-AS1A8MUL3 147 aa13.25□□□□□ -0.29
SNAPC3-205ENST00000467062 NXPH4O95158 308 aa13.25□□□□□ -0.29
SNAPC3-205ENST00000467062 PSMB8P28062 276 aa13.25□□□□□ -0.29
SNAPC3-205ENST00000467062 KIR2DL5BQ8NHK3 375 aa13.25□□□□□ -0.29
SNAPC3-205ENST00000467062 OPRPNQ99935 248 aaPredicted RBP13.25□□□□□ -0.29
SNAPC3-205ENST00000467062 MUC4Q99102 2169 aa13.24□□□□□ -0.29
SNAPC3-205ENST00000467062 CCDC168Q8NDH2 2452 aa13.24□□□□□ -0.29
SNAPC3-205ENST00000467062 C4orf26Q17RF5 130 aa13.24□□□□□ -0.29
SNAPC3-205ENST00000467062 F5H697 171 aa13.24□□□□□ -0.29
SNAPC3-205ENST00000467062 NSUN5P1Q3KNT7 163 aa13.24□□□□□ -0.29
SNAPC3-205ENST00000467062 FAM19A4Q96LR4 140 aa13.24□□□□□ -0.29
SNAPC3-205ENST00000467062 BBC3Q96PG8 261 aaPredicted RBP13.24□□□□□ -0.29
SNAPC3-205ENST00000467062 A0A087WWL8 130 aa13.23□□□□□ -0.29
SNAPC3-205ENST00000467062 TRBV6-5A0A0K0K1A5 114 aa13.23□□□□□ -0.29
SNAPC3-205ENST00000467062 SYNJ2BPP57105 145 aa13.23□□□□□ -0.29
SNAPC3-205ENST00000467062 KRTAP10-9P60411 292 aa13.23□□□□□ -0.29
SNAPC3-205ENST00000467062 RPL18AQ02543 176 aaKnown RBP13.23□□□□□ -0.29
SNAPC3-205ENST00000467062 ZNF580Q9UK33 172 aa13.23□□□□□ -0.29
SNAPC3-205ENST00000467062 NIPBLQ6KC79 2804 aaeCLIP13.22□□□□□ -0.29
SNAPC3-205ENST00000467062 DAZ2Q13117 558 aaKnown RBP13.22□□□□□ -0.29
SNAPC3-205ENST00000467062 DAZ4Q86SG3 579 aaKnown RBP13.22□□□□□ -0.29
SNAPC3-205ENST00000467062 DAZ3Q9NR90 486 aaKnown RBP13.22□□□□□ -0.29
SNAPC3-205ENST00000467062 NDUFA12Q9UI09 145 aa13.22□□□□□ -0.29
SNAPC3-205ENST00000467062 INAFM2P0DMQ5 153 aa13.22□□□□□ -0.29
SNAPC3-205ENST00000467062 HRCT1Q6UXD1 115 aa13.22□□□□□ -0.29
SNAPC3-205ENST00000467062 SERP2Q8N6R1 65 aa13.21□□□□□ -0.29
SNAPC3-205ENST00000467062 LINC01356Q8N9X3 169 aa13.21□□□□□ -0.29
SNAPC3-205ENST00000467062 UBR5O95071 2799 aaPredicted RBP13.21□□□□□ -0.3
SNAPC3-205ENST00000467062 COX7A2LO14548 114 aa13.21□□□□□ -0.3
SNAPC3-205ENST00000467062 NPC2P61916 151 aa13.21□□□□□ -0.3
SNAPC3-205ENST00000467062 CYSTM1Q9H1C7 97 aa13.21□□□□□ -0.3
SNAPC3-205ENST00000467062 Q5XG85 94 aa13.2□□□□□ -0.3
SNAPC3-205ENST00000467062 IGHV1-58A0A0C4DH39 117 aa13.19□□□□□ -0.3
SNAPC3-205ENST00000467062 FAM74A4Q5TZK3 123 aa13.19□□□□□ -0.3
SNAPC3-205ENST00000467062 DSCR8Q96T75 97 aa13.19□□□□□ -0.3
SNAPC3-205ENST00000467062 APCP25054 2843 aa13.19□□□□□ -0.3
SNAPC3-205ENST00000467062 DEFB136Q30KP8 78 aa13.19□□□□□ -0.3
SNAPC3-205ENST00000467062 C18orf65Q6ZTR6 163 aa13.19□□□□□ -0.3
SNAPC3-205ENST00000467062 CHD6Q8TD26 2715 aa13.18□□□□□ -0.3
SNAPC3-205ENST00000467062 TRAV13-1A0A0B4J241 112 aa13.18□□□□□ -0.3
SNAPC3-205ENST00000467062 OXTP01178 125 aa13.18□□□□□ -0.3
SNAPC3-205ENST00000467062 TIRAPP58753 221 aa13.18□□□□□ -0.3
SNAPC3-205ENST00000467062 IGLV4-3A0A075B6K6 122 aa13.18□□□□□ -0.3
SNAPC3-205ENST00000467062 A0A096LNT2 108 aa13.18□□□□□ -0.3
SNAPC3-205ENST00000467062 KLLNB2CW77 178 aa13.18□□□□□ -0.3
SNAPC3-205ENST00000467062 TIMM17BO60830 172 aa13.18□□□□□ -0.3
SNAPC3-205ENST00000467062 BAALC-AS2P0C853 105 aa13.18□□□□□ -0.3
SNAPC3-205ENST00000467062 SPINK13Q1W4C9 94 aa13.18□□□□□ -0.3
SNAPC3-205ENST00000467062 C20orf203Q8NBC4 194 aa13.18□□□□□ -0.3
SNAPC3-205ENST00000467062 HTN1P15515 57 aa13.17□□□□□ -0.3
SNAPC3-205ENST00000467062 UPK3BQ9BT76 320 aa13.17□□□□□ -0.3
SNAPC3-205ENST00000467062 AKAP9Q99996 3911 aa13.16□□□□□ -0.3
SNAPC3-205ENST00000467062 APRG1Q8IVJ8 170 aa13.16□□□□□ -0.3
SNAPC3-205ENST00000467062 K7EMT4 169 aa13.16□□□□□ -0.3
SNAPC3-205ENST00000467062 PRM2P04554 102 aa13.16□□□□□ -0.3
SNAPC3-205ENST00000467062 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
SNAPC3-205ENST00000467062 WNK1Q9H4A3 2382 aa13.16□□□□□ -0.3
SNAPC3-205ENST00000467062 PRRC2AP48634 2157 aaKnown RBP13.15□□□□□ -0.3
SNAPC3-205ENST00000467062 MRPS36P82909 103 aaKnown RBP13.15□□□□□ -0.3
SNAPC3-205ENST00000467062 NOTCH3Q9UM47 2321 aa13.14□□□□□ -0.31
SNAPC3-205ENST00000467062 HOXD3P31249 432 aaPredicted RBP13.14□□□□□ -0.31
SNAPC3-205ENST00000467062 VSIG2Q96IQ7 327 aa13.14□□□□□ -0.31
SNAPC3-205ENST00000467062 PYGO1Q9Y3Y4 419 aa13.14□□□□□ -0.31
SNAPC3-205ENST00000467062 DSCR9P59020 149 aa13.13□□□□□ -0.31
SNAPC3-205ENST00000467062 RNF152Q8N8N0 203 aa13.12□□□□□ -0.31
SNAPC3-205ENST00000467062 SLURP1P55000 103 aa13.11□□□□□ -0.31
SNAPC3-205ENST00000467062 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
SNAPC3-205ENST00000467062 BEAN1Q3B7T3 259 aa13.11□□□□□ -0.31
SNAPC3-205ENST00000467062 CD28P10747 220 aa13.11□□□□□ -0.31
SNAPC3-205ENST00000467062 CIRBPQ14011 172 aaKnown RBP13.11□□□□□ -0.31
SNAPC3-205ENST00000467062 ZNF702PQ9H963 129 aa13.11□□□□□ -0.31
SNAPC3-205ENST00000467062 M0QY20 66 aa13.1□□□□□ -0.31
SNAPC3-205ENST00000467062 Q6JHZ5 121 aa13.1□□□□□ -0.31
SNAPC3-205ENST00000467062 ITPR3Q14573 2671 aa13.1□□□□□ -0.31
SNAPC3-205ENST00000467062 K7EQG2 157 aa13.1□□□□□ -0.31
SNAPC3-205ENST00000467062 IGHV4-31P0DP07 118 aa13.1□□□□□ -0.31
SNAPC3-205ENST00000467062 ACANP16112 2415 aa13.09□□□□□ -0.31
SNAPC3-205ENST00000467062 KNCNA6PVL3 124 aa13.09□□□□□ -0.31
SNAPC3-205ENST00000467062 MALP21145 153 aa13.09□□□□□ -0.31
SNAPC3-205ENST00000467062 IGHV3-16A0A0C4DH30 117 aa13.08□□□□□ -0.32
SNAPC3-205ENST00000467062 NDUFC2-KCTD14E9PQ53 114 aa13.08□□□□□ -0.32
SNAPC3-205ENST00000467062 KHDC1LQ5JSQ8 128 aa13.08□□□□□ -0.32
SNAPC3-205ENST00000467062 Q6YL49 198 aa13.08□□□□□ -0.32
SNAPC3-205ENST00000467062 COPS9Q8WXC6 57 aa13.08□□□□□ -0.32
SNAPC3-205ENST00000467062 IGHV3-73A0A0B4J1V6 119 aa13.08□□□□□ -0.32
SNAPC3-205ENST00000467062 DNAL4O96015 105 aa13.08□□□□□ -0.32
SNAPC3-205ENST00000467062 PRO0628Q9UI54 55 aa13.08□□□□□ -0.32
SNAPC3-205ENST00000467062 C22orf24Q9Y442 160 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms