RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 LGALS9CQ6DKI2 356 aa11.73□□□□□ -0.53
PTPRU-206ENST00000465525 DGAT2L7PQ6IED9 249 aa11.73□□□□□ -0.53
PTPRU-206ENST00000465525 Q6ZUT4 128 aa11.73□□□□□ -0.53
PTPRU-206ENST00000465525 FAM104AQ969W3 186 aa11.73□□□□□ -0.53
PTPRU-206ENST00000465525 A0A087WX48 190 aa11.72□□□□□ -0.53
PTPRU-206ENST00000465525 H7C423 109 aa11.72□□□□□ -0.53
PTPRU-206ENST00000465525 ERASQ7Z444 233 aa11.72□□□□□ -0.53
PTPRU-206ENST00000465525 MRPL52Q86TS9 123 aaKnown RBP11.72□□□□□ -0.53
PTPRU-206ENST00000465525 OR5A1Q8NGJ0 315 aa11.72□□□□□ -0.53
PTPRU-206ENST00000465525 SPANXA1Q9NS26 97 aa11.72□□□□□ -0.53
PTPRU-206ENST00000465525 IGLV4-3A0A075B6K6 122 aa11.71□□□□□ -0.53
PTPRU-206ENST00000465525 H0Y8G0 127 aa11.71□□□□□ -0.53
PTPRU-206ENST00000465525 KRTDAPP60985 99 aa11.71□□□□□ -0.53
PTPRU-206ENST00000465525 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.71□□□□□ -0.54
PTPRU-206ENST00000465525 IFI27L1Q96BM0 104 aa11.71□□□□□ -0.54
PTPRU-206ENST00000465525 TMEM101Q96IK0 257 aa11.71□□□□□ -0.54
PTPRU-206ENST00000465525 TIMM21Q9BVV7 248 aa11.71□□□□□ -0.54
PTPRU-206ENST00000465525 CLPSL2Q6UWE3 100 aa11.7□□□□□ -0.54
PTPRU-206ENST00000465525 TIMM17AQ99595 171 aa11.7□□□□□ -0.54
PTPRU-206ENST00000465525 UPK3BQ9BT76 320 aa11.7□□□□□ -0.54
PTPRU-206ENST00000465525 HSPB8Q9UJY1 196 aa11.7□□□□□ -0.54
PTPRU-206ENST00000465525 PYGO1Q9Y3Y4 419 aa11.7□□□□□ -0.54
PTPRU-206ENST00000465525 LINC00587B1AMM8 73 aa11.69□□□□□ -0.54
PTPRU-206ENST00000465525 SIVA1O15304 175 aa11.69□□□□□ -0.54
PTPRU-206ENST00000465525 ATP5LO75964 103 aa11.69□□□□□ -0.54
PTPRU-206ENST00000465525 ANGP03950 147 aaKnown RBP11.69□□□□□ -0.54
PTPRU-206ENST00000465525 TMEM141Q96I45 108 aa11.69□□□□□ -0.54
PTPRU-206ENST00000465525 IGKV3OR2-268A0A0C4DH90 116 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 ZNF25P17030 456 aaPredicted RBP11.68□□□□□ -0.54
PTPRU-206ENST00000465525 ZNF664Q8N3J9 261 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 BAALCQ8WXS3 180 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 LINC00476Q8WZB0 136 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 CDC42SE2Q9NRR3 84 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 A0A1B0GUV1 79 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 LINC01549A6NIU2 74 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 LY6G6CO95867 125 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 C3orf79P0CE67 100 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 Q6ZN92 141 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 TEX43Q6ZNM6 134 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 Q9H8V8 135 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 KLK12Q9UKR0 248 aa11.68□□□□□ -0.54
PTPRU-206ENST00000465525 CSDC2Q9Y534 153 aaKnown RBP11.68□□□□□ -0.54
PTPRU-206ENST00000465525 LYSTQ99698 3801 aa11.67□□□□□ -0.54
PTPRU-206ENST00000465525 PRSS1P07477 247 aa11.67□□□□□ -0.54
PTPRU-206ENST00000465525 DNAH10OSP0CZ25 163 aa11.67□□□□□ -0.54
PTPRU-206ENST00000465525 SMAGPQ0VAQ4 97 aa11.67□□□□□ -0.54
PTPRU-206ENST00000465525 LINC01556Q5JQF7 62 aa11.67□□□□□ -0.54
PTPRU-206ENST00000465525 LINC00269Q8N2A0 174 aa11.67□□□□□ -0.54
PTPRU-206ENST00000465525 MRPS36P82909 103 aaKnown RBP11.66□□□□□ -0.54
PTPRU-206ENST00000465525 PRO1933Q9H354 126 aa11.66□□□□□ -0.54
PTPRU-206ENST00000465525 DDTP30046 118 aa11.65□□□□□ -0.54
PTPRU-206ENST00000465525 SPATA12Q7Z6I5 190 aa11.65□□□□□ -0.54
PTPRU-206ENST00000465525 MAP1LC3CQ9BXW4 147 aa11.65□□□□□ -0.54
PTPRU-206ENST00000465525 VCX2Q9H322 139 aa11.65□□□□□ -0.54
PTPRU-206ENST00000465525 VAMP8Q9BV40 100 aa11.65□□□□□ -0.55
PTPRU-206ENST00000465525 PRSS29PA6NIE9 313 aa11.64□□□□□ -0.55
PTPRU-206ENST00000465525 AMELXQ99217 191 aa11.64□□□□□ -0.55
PTPRU-206ENST00000465525 PMCHL2Q9BQD1 86 aa11.64□□□□□ -0.55
PTPRU-206ENST00000465525 CST9LQ9H4G1 147 aa11.64□□□□□ -0.55
PTPRU-206ENST00000465525 TRAV13-1A0A0B4J241 112 aa11.63□□□□□ -0.55
PTPRU-206ENST00000465525 SYS1-DBNDD2H3BUS1 97 aa11.63□□□□□ -0.55
PTPRU-206ENST00000465525 PMVKQ15126 192 aa11.63□□□□□ -0.55
PTPRU-206ENST00000465525 VPS13DQ5THJ4 4388 aa11.63□□□□□ -0.55
PTPRU-206ENST00000465525 C20orf202A1L168 122 aa11.62□□□□□ -0.55
PTPRU-206ENST00000465525 REG3AQ06141 175 aa11.62□□□□□ -0.55
PTPRU-206ENST00000465525 UBE2WQ96B02 151 aa11.62□□□□□ -0.55
PTPRU-206ENST00000465525 LCE6AA0A183 80 aa11.62□□□□□ -0.55
PTPRU-206ENST00000465525 NPSP0C0P6 89 aa11.62□□□□□ -0.55
PTPRU-206ENST00000465525 PAPPA-AS1Q5QFB9 102 aa11.62□□□□□ -0.55
PTPRU-206ENST00000465525 ENHOQ6UWT2 76 aa11.62□□□□□ -0.55
PTPRU-206ENST00000465525 KRTAP1-5Q9BYS1 174 aa11.62□□□□□ -0.55
PTPRU-206ENST00000465525 IGLV10-54A0A075B6I4 117 aa11.6□□□□□ -0.55
PTPRU-206ENST00000465525 C2orf88Q9BSF0 95 aa11.6□□□□□ -0.55
PTPRU-206ENST00000465525 ALMS1Q8TCU4 4167 aa11.6□□□□□ -0.55
PTPRU-206ENST00000465525 A0A0J9YXV3 536 aa11.59□□□□□ -0.55
PTPRU-206ENST00000465525 K7EP13 123 aa11.59□□□□□ -0.55
PTPRU-206ENST00000465525 CRPP02741 224 aa11.59□□□□□ -0.55
PTPRU-206ENST00000465525 ODF1Q14990 250 aa11.59□□□□□ -0.55
PTPRU-206ENST00000465525 PET117Q6UWS5 81 aa11.59□□□□□ -0.55
PTPRU-206ENST00000465525 Q9HAA7 133 aa11.59□□□□□ -0.55
PTPRU-206ENST00000465525 CHTOPQ9Y3Y2 248 aaKnown RBP11.59□□□□□ -0.55
PTPRU-206ENST00000465525 TRAV9-2A0A087WT02 112 aa11.59□□□□□ -0.55
PTPRU-206ENST00000465525 TRAV12-1A0A0B4J245 112 aa11.59□□□□□ -0.55
PTPRU-206ENST00000465525 LINC00959A0A1B0GUT2 108 aa11.59□□□□□ -0.55
PTPRU-206ENST00000465525 M0R2N4 97 aa11.59□□□□□ -0.55
PTPRU-206ENST00000465525 PRR34Q9NV39 138 aa11.59□□□□□ -0.55
PTPRU-206ENST00000465525 MRPL35Q9NZE8 188 aaKnown RBP11.59□□□□□ -0.55
PTPRU-206ENST00000465525 DNAH1Q9P2D7 4330 aa11.58□□□□□ -0.56
PTPRU-206ENST00000465525 UBE2D1P51668 147 aa11.58□□□□□ -0.56
PTPRU-206ENST00000465525 PAM16Q9Y3D7 125 aa11.58□□□□□ -0.56
PTPRU-206ENST00000465525 IGLV4-69A0A075B6H9 119 aa11.57□□□□□ -0.56
PTPRU-206ENST00000465525 NBDYA0A0U1RRE5 68 aa11.56□□□□□ -0.56
PTPRU-206ENST00000465525 COX6A2Q02221 97 aa11.56□□□□□ -0.56
PTPRU-206ENST00000465525 IBA57-AS1B1ANH7 110 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 CCL25O15444 150 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 XCL1P47992 114 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 TTC32Q5I0X7 151 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 LINC00242Q5T6M2 205 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 LINC01545Q5VT33 79 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 C10orf126Q8N4M7 172 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms