RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CSMD3Q7Z407 3707 aa11.81□□□□□ -0.52
EXOSC3-203ENST00000465229 A0A0J9YY99 117 aa11.81□□□□□ -0.52
EXOSC3-203ENST00000465229 MPV17L2Q567V2 206 aa11.81□□□□□ -0.52
EXOSC3-203ENST00000465229 K7EQD1 137 aa11.8□□□□□ -0.52
EXOSC3-203ENST00000465229 PAX4O43316 350 aa11.8□□□□□ -0.52
EXOSC3-203ENST00000465229 BVES-AS1Q5T3Y7 98 aa11.8□□□□□ -0.52
EXOSC3-203ENST00000465229 DYNC2H1Q8NCM8 4307 aaKnown RBP11.8□□□□□ -0.52
EXOSC3-203ENST00000465229 IGLV4-69A0A075B6H9 119 aa11.79□□□□□ -0.52
EXOSC3-203ENST00000465229 TMEM97Q5BJF2 176 aa11.79□□□□□ -0.52
EXOSC3-203ENST00000465229 CEMP1Q6PRD7 247 aaPredicted RBP11.79□□□□□ -0.52
EXOSC3-203ENST00000465229 LOC100131303A0A0U1RQF7 123 aa11.78□□□□□ -0.52
EXOSC3-203ENST00000465229 MUC7Q8TAX7 377 aa11.78□□□□□ -0.52
EXOSC3-203ENST00000465229 DEFB104AQ8WTQ1 72 aa11.78□□□□□ -0.52
EXOSC3-203ENST00000465229 PRADC1Q9BSG0 188 aa11.78□□□□□ -0.52
EXOSC3-203ENST00000465229 TRBV7-3A0A075B6L6 115 aa11.78□□□□□ -0.52
EXOSC3-203ENST00000465229 E9PLD3 99 aa11.78□□□□□ -0.52
EXOSC3-203ENST00000465229 COTL1Q14019 142 aa11.78□□□□□ -0.52
EXOSC3-203ENST00000465229 NFE4Q86UQ8 179 aa11.78□□□□□ -0.52
EXOSC3-203ENST00000465229 SPANXA1Q9NS26 97 aa11.78□□□□□ -0.52
EXOSC3-203ENST00000465229 IGLV4-3A0A075B6K6 122 aa11.77□□□□□ -0.53
EXOSC3-203ENST00000465229 H3BNG1 76 aa11.77□□□□□ -0.53
EXOSC3-203ENST00000465229 GYPEP15421 78 aa11.77□□□□□ -0.53
EXOSC3-203ENST00000465229 TCTAP57738 103 aa11.77□□□□□ -0.53
EXOSC3-203ENST00000465229 RPL36AP83881 106 aaKnown RBP11.77□□□□□ -0.53
EXOSC3-203ENST00000465229 HSD52Q0P140 79 aa11.77□□□□□ -0.53
EXOSC3-203ENST00000465229 RPL36ALQ969Q0 106 aaKnown RBP11.77□□□□□ -0.53
EXOSC3-203ENST00000465229 CHCHD7Q9BUK0 85 aa11.77□□□□□ -0.53
EXOSC3-203ENST00000465229 TENM2Q9NT68 2774 aa11.77□□□□□ -0.53
EXOSC3-203ENST00000465229 C11orf86A6NJI1 115 aa11.76□□□□□ -0.53
EXOSC3-203ENST00000465229 IGLL5B9A064 214 aa11.76□□□□□ -0.53
EXOSC3-203ENST00000465229 SEC11AP67812 179 aa11.76□□□□□ -0.53
EXOSC3-203ENST00000465229 NUPR2A6NF83 97 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 ZFAND6Q6FIF0 208 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 DAZ4Q86SG3 579 aaKnown RBP11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 AMELXQ99217 191 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 VCX2Q9H322 139 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 DAZ3Q9NR90 486 aaKnown RBP11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 GAGE12JA6NER3 117 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 HERVK_113P61574 105 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 GAGE1Q13065 139 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 GAGE4Q13068 117 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 GAGE5Q13069 117 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 GAGE13Q4V321 117 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 ZNRF2Q8NHG8 242 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 TIMM21Q9BVV7 248 aa11.75□□□□□ -0.53
EXOSC3-203ENST00000465229 TRBV25-1A0A075B6N4 114 aa11.74□□□□□ -0.53
EXOSC3-203ENST00000465229 STARD9Q9P2P6 4700 aa11.74□□□□□ -0.53
EXOSC3-203ENST00000465229 A0A096LPF7 62 aa11.73□□□□□ -0.53
EXOSC3-203ENST00000465229 UBE2D3P61077 147 aa11.73□□□□□ -0.53
EXOSC3-203ENST00000465229 UBE2D2P62837 147 aa11.73□□□□□ -0.53
EXOSC3-203ENST00000465229 MRPL23Q16540 153 aaKnown RBP11.73□□□□□ -0.53
EXOSC3-203ENST00000465229 UBE2D4Q9Y2X8 147 aa11.73□□□□□ -0.53
EXOSC3-203ENST00000465229 KLK5Q9Y337 293 aaPredicted RBP11.73□□□□□ -0.53
EXOSC3-203ENST00000465229 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
EXOSC3-203ENST00000465229 LINC00694P0DN24 101 aa11.72□□□□□ -0.53
EXOSC3-203ENST00000465229 FAM104AQ969W3 186 aa11.72□□□□□ -0.53
EXOSC3-203ENST00000465229 OPRPNQ99935 248 aaPredicted RBP11.72□□□□□ -0.53
EXOSC3-203ENST00000465229 ICOSQ9Y6W8 199 aa11.72□□□□□ -0.53
EXOSC3-203ENST00000465229 PLECQ15149 4684 aaKnown RBP11.72□□□□□ -0.53
EXOSC3-203ENST00000465229 MRPS36P82909 103 aaKnown RBP11.71□□□□□ -0.53
EXOSC3-203ENST00000465229 MAPKAPK5-AS1Q8N8E1 139 aa11.71□□□□□ -0.53
EXOSC3-203ENST00000465229 C15orf53Q8NAA6 179 aa11.71□□□□□ -0.53
EXOSC3-203ENST00000465229 ORAOV1Q8WV07 137 aa11.71□□□□□ -0.53
EXOSC3-203ENST00000465229 TTTY13Q9BZ97 58 aa11.71□□□□□ -0.53
EXOSC3-203ENST00000465229 MYMXA0A1B0GTQ4 84 aa11.71□□□□□ -0.54
EXOSC3-203ENST00000465229 TAL2Q16559 108 aa11.71□□□□□ -0.54
EXOSC3-203ENST00000465229 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.54
EXOSC3-203ENST00000465229 APLNQ9ULZ1 77 aa11.71□□□□□ -0.54
EXOSC3-203ENST00000465229 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
EXOSC3-203ENST00000465229 SMAGPQ0VAQ4 97 aa11.7□□□□□ -0.54
EXOSC3-203ENST00000465229 GTSF1LQ9H1H1 148 aa11.7□□□□□ -0.54
EXOSC3-203ENST00000465229 COX11Q9Y6N1 276 aa11.7□□□□□ -0.54
EXOSC3-203ENST00000465229 A6NDN8 102 aa11.69□□□□□ -0.54
EXOSC3-203ENST00000465229 ATP6V0E2Q8NHE4 81 aa11.69□□□□□ -0.54
EXOSC3-203ENST00000465229 CSDC2Q9Y534 153 aaKnown RBP11.69□□□□□ -0.54
EXOSC3-203ENST00000465229 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.68□□□□□ -0.54
EXOSC3-203ENST00000465229 IGKV2-29A2NJV5 120 aaPredicted RBP11.68□□□□□ -0.54
EXOSC3-203ENST00000465229 C3orf84H3BNL1 204 aa11.68□□□□□ -0.54
EXOSC3-203ENST00000465229 TMEM170BQ5T4T1 132 aa11.68□□□□□ -0.54
EXOSC3-203ENST00000465229 TAX1BP3O14907 124 aa11.68□□□□□ -0.54
EXOSC3-203ENST00000465229 ZNF25P17030 456 aaPredicted RBP11.68□□□□□ -0.54
EXOSC3-203ENST00000465229 CASC10Q5T4H9 136 aa11.68□□□□□ -0.54
EXOSC3-203ENST00000465229 SH2D6Q7Z4S9 175 aa11.68□□□□□ -0.54
EXOSC3-203ENST00000465229 TMEM223A0PJW6 202 aa11.67□□□□□ -0.54
EXOSC3-203ENST00000465229 ZNF22P17026 224 aaPredicted RBP11.67□□□□□ -0.54
EXOSC3-203ENST00000465229 TM2D2Q9BX73 214 aa11.67□□□□□ -0.54
EXOSC3-203ENST00000465229 A0A0J9YXV3 536 aa11.66□□□□□ -0.54
EXOSC3-203ENST00000465229 TINCRA0A1B0GVN0 87 aa11.66□□□□□ -0.54
EXOSC3-203ENST00000465229 NTM-AS1Q6ZSK4 140 aa11.66□□□□□ -0.54
EXOSC3-203ENST00000465229 H7C423 109 aa11.65□□□□□ -0.54
EXOSC3-203ENST00000465229 ESRGQ1W209 222 aa11.65□□□□□ -0.54
EXOSC3-203ENST00000465229 LYPD5Q6UWN5 251 aa11.65□□□□□ -0.54
EXOSC3-203ENST00000465229 ZNF815PA8K554 130 aa11.64□□□□□ -0.55
EXOSC3-203ENST00000465229 LEPROTO15243 131 aa11.64□□□□□ -0.55
EXOSC3-203ENST00000465229 Q6ZUT4 128 aa11.64□□□□□ -0.55
EXOSC3-203ENST00000465229 CEND1Q8N111 149 aa11.64□□□□□ -0.55
EXOSC3-203ENST00000465229 DGAT2L7PQ6IED9 249 aa11.64□□□□□ -0.55
EXOSC3-203ENST00000465229 H3BRM9 83 aa11.63□□□□□ -0.55
EXOSC3-203ENST00000465229 J3QQQ9 107 aa11.63□□□□□ -0.55
EXOSC3-203ENST00000465229 LINC00469Q8N7U9 141 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms