RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
LIMD1-203ENST00000465039 LINC01549A6NIU2 74 aa9.08□□□□□ -0.96
LIMD1-203ENST00000465039 ORMDL2Q53FV1 153 aa9.08□□□□□ -0.96
LIMD1-203ENST00000465039 DGAT2L7PQ6IED9 249 aa9.08□□□□□ -0.96
LIMD1-203ENST00000465039 SPATA12Q7Z6I5 190 aa9.08□□□□□ -0.96
LIMD1-203ENST00000465039 SLC7A5P1Q8MH63 180 aa9.08□□□□□ -0.96
LIMD1-203ENST00000465039 Q8N814 137 aa9.08□□□□□ -0.96
LIMD1-203ENST00000465039 DEFB104AQ8WTQ1 72 aa9.08□□□□□ -0.96
LIMD1-203ENST00000465039 SMCO4Q9NRQ5 59 aa9.08□□□□□ -0.96
LIMD1-203ENST00000465039 CDC42SE2Q9NRR3 84 aa9.08□□□□□ -0.96
LIMD1-203ENST00000465039 MRPS36P82909 103 aaKnown RBP9.07□□□□□ -0.96
LIMD1-203ENST00000465039 KRTAP26-1Q6PEX3 210 aa9.07□□□□□ -0.96
LIMD1-203ENST00000465039 ZNF664Q8N3J9 261 aa9.07□□□□□ -0.96
LIMD1-203ENST00000465039 MAPKAPK5-AS1Q8N8E1 139 aa9.07□□□□□ -0.96
LIMD1-203ENST00000465039 YPEL4Q96NS1 127 aa9.07□□□□□ -0.96
LIMD1-203ENST00000465039 ALKBH7Q9BT30 221 aaPredicted RBP9.07□□□□□ -0.96
LIMD1-203ENST00000465039 MRPL18Q9H0U6 180 aaKnown RBP9.07□□□□□ -0.96
LIMD1-203ENST00000465039 PYGO1Q9Y3Y4 419 aa9.07□□□□□ -0.96
LIMD1-203ENST00000465039 TGIF2-C20orf24A0A0A6YYL0 155 aa9.06□□□□□ -0.96
LIMD1-203ENST00000465039 LINC01546A6NGU7 62 aa9.05□□□□□ -0.96
LIMD1-203ENST00000465039 C16orf90A8MZG2 172 aa9.05□□□□□ -0.96
LIMD1-203ENST00000465039 FABP9Q0Z7S8 132 aa9.05□□□□□ -0.96
LIMD1-203ENST00000465039 CLPSL2Q6UWE3 100 aa9.05□□□□□ -0.96
LIMD1-203ENST00000465039 DYNC1H1Q14204 4646 aaKnown RBP9.04□□□□□ -0.96
LIMD1-203ENST00000465039 IFI27P40305 119 aaPredicted RBP9.04□□□□□ -0.96
LIMD1-203ENST00000465039 KRTAP10-2P60368 255 aa9.04□□□□□ -0.96
LIMD1-203ENST00000465039 CYSLTR1Q9Y271 337 aa9.04□□□□□ -0.96
LIMD1-203ENST00000465039 TRAPPC1Q9Y5R8 145 aa9.04□□□□□ -0.96
LIMD1-203ENST00000465039 LOC389332A0A1B0GUA5 103 aa9.03□□□□□ -0.96
LIMD1-203ENST00000465039 LINC00959A0A1B0GUT2 108 aa9.03□□□□□ -0.96
LIMD1-203ENST00000465039 C1orf196B1AJZ1 125 aa9.03□□□□□ -0.96
LIMD1-203ENST00000465039 SS18Q15532 418 aa9.03□□□□□ -0.96
LIMD1-203ENST00000465039 KIAA1644Q3SXP7 199 aa9.03□□□□□ -0.96
LIMD1-203ENST00000465039 BAALCQ8WXS3 180 aa9.03□□□□□ -0.96
LIMD1-203ENST00000465039 PAPPA-AS1Q5QFB9 102 aa9.02□□□□□ -0.97
LIMD1-203ENST00000465039 CFAP161Q6P656 301 aa9.02□□□□□ -0.97
LIMD1-203ENST00000465039 PRSS3P2Q8NHM4 247 aa9.02□□□□□ -0.97
LIMD1-203ENST00000465039 CHCHD10Q8WYQ3 142 aaPredicted RBP9.02□□□□□ -0.97
LIMD1-203ENST00000465039 IGLV10-54A0A075B6I4 117 aa9.01□□□□□ -0.97
LIMD1-203ENST00000465039 IGLV5-52A0A0A0MRZ9 124 aa9.01□□□□□ -0.97
LIMD1-203ENST00000465039 USP17L23D6RBM5 183 aa9.01□□□□□ -0.97
LIMD1-203ENST00000465039 RPL39P62891 51 aaKnown RBP9.01□□□□□ -0.97
LIMD1-203ENST00000465039 WFDC2Q14508 124 aa9.01□□□□□ -0.97
LIMD1-203ENST00000465039 CD164L2Q6UWJ8 174 aa9.01□□□□□ -0.97
LIMD1-203ENST00000465039 C2orf66Q6UXQ4 117 aa9.01□□□□□ -0.97
LIMD1-203ENST00000465039 CBLN2Q8IUK8 224 aa9.01□□□□□ -0.97
LIMD1-203ENST00000465039 CDK2AP2O75956 126 aa9□□□□□ -0.97
LIMD1-203ENST00000465039 Q6ZUT4 128 aa9□□□□□ -0.97
LIMD1-203ENST00000465039 TIMM17AQ99595 171 aa9□□□□□ -0.97
LIMD1-203ENST00000465039 GAGE12HA6NDE8 117 aa8.99□□□□□ -0.97
LIMD1-203ENST00000465039 RAB5BP61020 215 aa8.99□□□□□ -0.97
LIMD1-203ENST00000465039 Q6ZN92 141 aa8.99□□□□□ -0.97
LIMD1-203ENST00000465039 FA2HQ7L5A8 372 aa8.99□□□□□ -0.97
LIMD1-203ENST00000465039 TOMM6Q96B49 74 aa8.99□□□□□ -0.97
LIMD1-203ENST00000465039 TMEM141Q96I45 108 aa8.99□□□□□ -0.97
LIMD1-203ENST00000465039 AP5S1Q9NUS5 200 aa8.99□□□□□ -0.97
LIMD1-203ENST00000465039 IGKV3OR2-268A0A0C4DH90 116 aa8.98□□□□□ -0.97
LIMD1-203ENST00000465039 IGIPA6NJ69 53 aa8.98□□□□□ -0.97
LIMD1-203ENST00000465039 LECT2O14960 151 aa8.98□□□□□ -0.97
LIMD1-203ENST00000465039 GCSHP23434 173 aa8.98□□□□□ -0.97
LIMD1-203ENST00000465039 CNBPP62633 177 aaKnown RBP8.98□□□□□ -0.97
LIMD1-203ENST00000465039 FOXI1Q12951 378 aa8.98□□□□□ -0.97
LIMD1-203ENST00000465039 C18orf32Q8TCD1 76 aa8.98□□□□□ -0.97
LIMD1-203ENST00000465039 FAM104AQ969W3 186 aa8.98□□□□□ -0.97
LIMD1-203ENST00000465039 DNAH5Q8TE73 4624 aa8.98□□□□□ -0.97
LIMD1-203ENST00000465039 LRP1BQ9NZR2 4599 aa8.98□□□□□ -0.97
LIMD1-203ENST00000465039 IGLV4-3A0A075B6K6 122 aa8.97□□□□□ -0.97
LIMD1-203ENST00000465039 GVQW2A0A096LPI5 108 aaPredicted RBP8.97□□□□□ -0.97
LIMD1-203ENST00000465039 XCL1P47992 114 aa8.97□□□□□ -0.97
LIMD1-203ENST00000465039 TEX43Q6ZNM6 134 aa8.97□□□□□ -0.97
LIMD1-203ENST00000465039 ERASQ7Z444 233 aa8.97□□□□□ -0.97
LIMD1-203ENST00000465039 C2orf88Q9BSF0 95 aa8.97□□□□□ -0.97
LIMD1-203ENST00000465039 KIAA1109Q2LD37 5005 aa8.97□□□□□ -0.97
LIMD1-203ENST00000465039 IFITM10A6NMD0 228 aa8.96□□□□□ -0.98
LIMD1-203ENST00000465039 TRAV13-1A0A0B4J241 112 aa8.95□□□□□ -0.98
LIMD1-203ENST00000465039 IGHV1-58A0A0C4DH39 117 aa8.95□□□□□ -0.98
LIMD1-203ENST00000465039 COX7A2LO14548 114 aa8.95□□□□□ -0.98
LIMD1-203ENST00000465039 PRSS1P07477 247 aa8.95□□□□□ -0.98
LIMD1-203ENST00000465039 C15orf56Q8N910 161 aa8.95□□□□□ -0.98
LIMD1-203ENST00000465039 AMELXQ99217 191 aa8.95□□□□□ -0.98
LIMD1-203ENST00000465039 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.94□□□□□ -0.98
LIMD1-203ENST00000465039 LINC00614P0C842 121 aa8.94□□□□□ -0.98
LIMD1-203ENST00000465039 SEC11AP67812 179 aa8.94□□□□□ -0.98
LIMD1-203ENST00000465039 FAM19A3Q7Z5A8 133 aa8.94□□□□□ -0.98
LIMD1-203ENST00000465039 CHCHD1Q96BP2 118 aaKnown RBP8.94□□□□□ -0.98
LIMD1-203ENST00000465039 VCX2Q9H322 139 aa8.94□□□□□ -0.98
LIMD1-203ENST00000465039 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
LIMD1-203ENST00000465039 IGHV3OR16-9A0A0B4J2B5 98 aa8.93□□□□□ -0.98
LIMD1-203ENST00000465039 hDV102S1A0JD36 115 aa8.93□□□□□ -0.98
LIMD1-203ENST00000465039 COLCA2A8K830 154 aa8.93□□□□□ -0.98
LIMD1-203ENST00000465039 APOMO95445 188 aa8.93□□□□□ -0.98
LIMD1-203ENST00000465039 RNASE13Q5GAN3 156 aaKnown RBP8.93□□□□□ -0.98
LIMD1-203ENST00000465039 PKIGQ9Y2B9 76 aa8.93□□□□□ -0.98
LIMD1-203ENST00000465039 HBDP02042 147 aa8.92□□□□□ -0.98
LIMD1-203ENST00000465039 UBE2D1P51668 147 aa8.92□□□□□ -0.98
LIMD1-203ENST00000465039 KRTAP10-1P60331 282 aa8.92□□□□□ -0.98
LIMD1-203ENST00000465039 Q6ZSA8 131 aa8.92□□□□□ -0.98
LIMD1-203ENST00000465039 LINC00173Q6ZV60 143 aa8.92□□□□□ -0.98
LIMD1-203ENST00000465039 LINC01561Q8N1V8 128 aa8.92□□□□□ -0.98
LIMD1-203ENST00000465039 C9orf163Q8N9P6 203 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms