RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 HOXD3P31249 432 aaPredicted RBP5.25□□□□□ -1.57
USP48-206ENST00000464577 COX6A2Q02221 97 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 CSDC2Q9Y534 153 aaKnown RBP5.25□□□□□ -1.57
USP48-206ENST00000464577 PTPRQQ9UMZ3 2332 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 IGHV3-38A0A0C4DH36 116 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 C19orf84I3L1E1 186 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 HTN1P15515 57 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 DEFB131AP59861 70 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 C10orf99Q6UWK7 81 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 Q8N2B8 174 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 LINC00526Q96FQ7 95 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 OVOL2Q9BRP0 275 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 C22orf24Q9Y442 160 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 GVINP1Q7Z2Y8 2422 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 MED13LQ71F56 2210 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 LAMA5O15230 3695 aa5.25□□□□□ -1.57
USP48-206ENST00000464577 NDUFA7O95182 113 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 C9orf153Q5TBE3 101 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 UBE2E2Q96LR5 201 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 NACAE9PAV3 2078 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 IGHV4-30-2A0A087WSY4 118 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 TRAV13-2A0A0B4J235 113 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 B4DSR2 109 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 F5H768 121 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 IGHV4-59P01825 116 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 RPL28P46779 137 aaKnown RBP5.24□□□□□ -1.57
USP48-206ENST00000464577 HIST1H4AP62805 103 aaKnown RBP5.24□□□□□ -1.57
USP48-206ENST00000464577 PRIMA1Q86XR5 153 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 CCL19Q99731 98 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 VPREB3Q9UKI3 123 aa5.24□□□□□ -1.57
USP48-206ENST00000464577 TTC28Q96AY4 2481 aa5.23□□□□□ -1.57
USP48-206ENST00000464577 INSP01308 110 aa5.23□□□□□ -1.57
USP48-206ENST00000464577 DEFB112Q30KQ8 113 aa5.23□□□□□ -1.57
USP48-206ENST00000464577 HIST2H2BCQ6DN03 193 aa5.23□□□□□ -1.57
USP48-206ENST00000464577 HIST2H2BDQ6DRA6 164 aa5.23□□□□□ -1.57
USP48-206ENST00000464577 DOPEY2Q9Y3R5 2298 aa5.22□□□□□ -1.57
USP48-206ENST00000464577 TRBV10-1A0A0K0K1A3 114 aa5.22□□□□□ -1.57
USP48-206ENST00000464577 MALP21145 153 aa5.22□□□□□ -1.57
USP48-206ENST00000464577 PTPRZ1P23471 2315 aaPredicted RBP5.22□□□□□ -1.57
USP48-206ENST00000464577 LINC00528Q8N1L1 170 aa5.22□□□□□ -1.57
USP48-206ENST00000464577 FAM218AQ96MZ4 157 aa5.22□□□□□ -1.57
USP48-206ENST00000464577 SPTBN1Q01082 2364 aaKnown RBP5.22□□□□□ -1.57
USP48-206ENST00000464577 ATOX1O00244 68 aa5.22□□□□□ -1.57
USP48-206ENST00000464577 PRM2P04554 102 aa5.22□□□□□ -1.57
USP48-206ENST00000464577 COX7CP15954 63 aa5.22□□□□□ -1.57
USP48-206ENST00000464577 IL17DQ8TAD2 202 aa5.22□□□□□ -1.57
USP48-206ENST00000464577 A0A0U1RRA0 63 aa5.21□□□□□ -1.58
USP48-206ENST00000464577 A0A1B0GX51 115 aa5.21□□□□□ -1.58
USP48-206ENST00000464577 CRPP02741 224 aa5.21□□□□□ -1.58
USP48-206ENST00000464577 LINC00694P0DN24 101 aa5.21□□□□□ -1.58
USP48-206ENST00000464577 CRYGAP11844 174 aa5.21□□□□□ -1.58
USP48-206ENST00000464577 ATP5J2P56134 94 aa5.21□□□□□ -1.58
USP48-206ENST00000464577 RPL36AP83881 106 aaKnown RBP5.21□□□□□ -1.58
USP48-206ENST00000464577 RPL36ALQ969Q0 106 aaKnown RBP5.21□□□□□ -1.58
USP48-206ENST00000464577 MAP6D1Q9H9H5 199 aa5.21□□□□□ -1.58
USP48-206ENST00000464577 CDC42SE2Q9NRR3 84 aa5.21□□□□□ -1.58
USP48-206ENST00000464577 TRAV13-1A0A0B4J241 112 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 K7EQD1 137 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 GAGE2AQ6NT46 116 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 LRRC75A-AS1Q8N1F1 130 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 C3orf56Q8N813 242 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 NRGNQ92686 78 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 C2orf48Q96LS8 159 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 OBSCN-AS1Q96MR7 158 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 ZNF702PQ9H963 129 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 J3QLI3 93 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 SLURP1P55000 103 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 Q6JHZ5 121 aa5.2□□□□□ -1.58
USP48-206ENST00000464577 RIF1Q5UIP0 2472 aaKnown RBP5.19□□□□□ -1.58
USP48-206ENST00000464577 ZFHX2Q9C0A1 2572 aaPredicted RBP5.19□□□□□ -1.58
USP48-206ENST00000464577 H0YGX0 51 aa5.19□□□□□ -1.58
USP48-206ENST00000464577 DNAL4O96015 105 aa5.19□□□□□ -1.58
USP48-206ENST00000464577 DSCR9P59020 149 aa5.19□□□□□ -1.58
USP48-206ENST00000464577 NTM-AS1Q6ZSK4 140 aa5.19□□□□□ -1.58
USP48-206ENST00000464577 SPTA1P02549 2419 aa5.19□□□□□ -1.58
USP48-206ENST00000464577 J3KT08 172 aa5.19□□□□□ -1.58
USP48-206ENST00000464577 LINC00337Q8N6G1 96 aa5.19□□□□□ -1.58
USP48-206ENST00000464577 LINC01356Q8N9X3 169 aa5.19□□□□□ -1.58
USP48-206ENST00000464577 Q9HAA7 133 aa5.19□□□□□ -1.58
USP48-206ENST00000464577 IGKV2-28A0A075B6P5 120 aa5.18□□□□□ -1.58
USP48-206ENST00000464577 IGKV2D-28P01615 120 aa5.18□□□□□ -1.58
USP48-206ENST00000464577 RPL18AQ02543 176 aaKnown RBP5.18□□□□□ -1.58
USP48-206ENST00000464577 COX7B2Q8TF08 81 aa5.18□□□□□ -1.58
USP48-206ENST00000464577 Q96MF0 132 aa5.18□□□□□ -1.58
USP48-206ENST00000464577 TMEM243Q9BU79 118 aa5.18□□□□□ -1.58
USP48-206ENST00000464577 SND1-IT1Q9HBX3 110 aa5.18□□□□□ -1.58
USP48-206ENST00000464577 COL6A6A6NMZ7 2263 aa5.18□□□□□ -1.58
USP48-206ENST00000464577 TRGV1A0A0A0MS02 117 aa5.17□□□□□ -1.58
USP48-206ENST00000464577 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
USP48-206ENST00000464577 GNLYP22749 145 aa5.17□□□□□ -1.58
USP48-206ENST00000464577 RPS28P62857 69 aaKnown RBP5.17□□□□□ -1.58
USP48-206ENST00000464577 Q6YL49 198 aa5.17□□□□□ -1.58
USP48-206ENST00000464577 MIR7-3HGQ8N6C7 128 aa5.17□□□□□ -1.58
USP48-206ENST00000464577 DYNLRB2Q8TF09 96 aa5.17□□□□□ -1.58
USP48-206ENST00000464577 KLK5Q9Y337 293 aaPredicted RBP5.17□□□□□ -1.58
USP48-206ENST00000464577 A0A087WYN8 130 aa5.17□□□□□ -1.58
USP48-206ENST00000464577 UBE2L6O14933 153 aa5.17□□□□□ -1.58
USP48-206ENST00000464577 DEFB114Q30KQ6 69 aa5.17□□□□□ -1.58
USP48-206ENST00000464577 C1orf158Q8N1D5 194 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms