RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 GAGE7O76087 117 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 IGHV3-30P01768 117 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 GAGE12FP0CL80 117 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 GAGE12GP0CL81 117 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 GAGE12IP0CL82 117 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 IGHV3-30-3P0DP02 117 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 IGHV3-30-5P0DP03 117 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 NTM-AS1Q6ZSK4 140 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 LINC00612Q8N6U2 182 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 NAA38Q9BRA0 125 aaKnown RBP12.43□□□□□ -0.42
LMO2-204ENST00000464025 C2CD3Q4AC94 2353 aa12.42□□□□□ -0.42
LMO2-204ENST00000464025 JMJD1CQ15652 2540 aa12.42□□□□□ -0.42
LMO2-204ENST00000464025 H7C423 109 aa12.42□□□□□ -0.42
LMO2-204ENST00000464025 CITED1Q99966 193 aa12.42□□□□□ -0.42
LMO2-204ENST00000464025 DGAT2L7PQ6IED9 249 aa12.41□□□□□ -0.42
LMO2-204ENST00000464025 VSIG2Q96IQ7 327 aa12.4□□□□□ -0.42
LMO2-204ENST00000464025 NOTCH3Q9UM47 2321 aa12.39□□□□□ -0.43
LMO2-204ENST00000464025 GAGE12JA6NER3 117 aa12.39□□□□□ -0.43
LMO2-204ENST00000464025 LINC00694P0DN24 101 aa12.39□□□□□ -0.43
LMO2-204ENST00000464025 GAGE4Q13068 117 aa12.39□□□□□ -0.43
LMO2-204ENST00000464025 GAGE5Q13069 117 aa12.39□□□□□ -0.43
LMO2-204ENST00000464025 FHL2Q14192 279 aa12.39□□□□□ -0.43
LMO2-204ENST00000464025 GAGE13Q4V321 117 aa12.39□□□□□ -0.43
LMO2-204ENST00000464025 RNASE13Q5GAN3 156 aaKnown RBP12.39□□□□□ -0.43
LMO2-204ENST00000464025 GEMIN7Q9H840 131 aaKnown RBP12.39□□□□□ -0.43
LMO2-204ENST00000464025 FN1P02751 2386 aaKnown RBP12.39□□□□□ -0.43
LMO2-204ENST00000464025 C10orf126Q8N4M7 172 aa12.39□□□□□ -0.43
LMO2-204ENST00000464025 TMEM238C9JI98 176 aa12.38□□□□□ -0.43
LMO2-204ENST00000464025 HERVK_113P63121 156 aa12.38□□□□□ -0.43
LMO2-204ENST00000464025 NOTCH2Q04721 2471 aa12.37□□□□□ -0.43
LMO2-204ENST00000464025 TRGV4A0A0C4DH28 118 aa12.37□□□□□ -0.43
LMO2-204ENST00000464025 A0A0J9YXY3 114 aa12.37□□□□□ -0.43
LMO2-204ENST00000464025 TMEM243Q9BU79 118 aa12.37□□□□□ -0.43
LMO2-204ENST00000464025 CDC42SE2Q9NRR3 84 aa12.37□□□□□ -0.43
LMO2-204ENST00000464025 OTOGQ6ZRI0 2925 aa12.37□□□□□ -0.43
LMO2-204ENST00000464025 NSD1Q96L73 2696 aaPredicted RBP12.37□□□□□ -0.43
LMO2-204ENST00000464025 IGHV3-64A0A075B6Q5 118 aa12.36□□□□□ -0.43
LMO2-204ENST00000464025 WFDC9Q8NEX5 89 aa12.36□□□□□ -0.43
LMO2-204ENST00000464025 X6R8D5 127 aa12.36□□□□□ -0.43
LMO2-204ENST00000464025 TRAV8-3A0A0A6YYJ7 113 aa12.35□□□□□ -0.43
LMO2-204ENST00000464025 ZFAND6Q6FIF0 208 aa12.35□□□□□ -0.43
LMO2-204ENST00000464025 WIPF1O43516 503 aa12.35□□□□□ -0.43
LMO2-204ENST00000464025 LINC00242Q5T6M2 205 aa12.35□□□□□ -0.43
LMO2-204ENST00000464025 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.35□□□□□ -0.43
LMO2-204ENST00000464025 SPATA3Q8NHX4 192 aa12.35□□□□□ -0.43
LMO2-204ENST00000464025 CDKN2A-AS1Q9UH64 79 aa12.35□□□□□ -0.43
LMO2-204ENST00000464025 IGLV5-39A0A0G2JS06 123 aa12.34□□□□□ -0.43
LMO2-204ENST00000464025 LITAFQ99732 161 aa12.34□□□□□ -0.43
LMO2-204ENST00000464025 NDUFA12Q9UI09 145 aa12.34□□□□□ -0.43
LMO2-204ENST00000464025 TIMM17BO60830 172 aa12.33□□□□□ -0.44
LMO2-204ENST00000464025 CFC1BP0CG36 223 aa12.33□□□□□ -0.44
LMO2-204ENST00000464025 CFC1P0CG37 223 aa12.33□□□□□ -0.44
LMO2-204ENST00000464025 RPL24P83731 157 aaKnown RBP12.33□□□□□ -0.44
LMO2-204ENST00000464025 TMEM101Q96IK0 257 aa12.33□□□□□ -0.44
LMO2-204ENST00000464025 PGPEP1Q9NXJ5 209 aa12.33□□□□□ -0.44
LMO2-204ENST00000464025 LOC100131303A0A0U1RQF7 123 aa12.32□□□□□ -0.44
LMO2-204ENST00000464025 UBE2L6O14933 153 aa12.32□□□□□ -0.44
LMO2-204ENST00000464025 SPINK8P0C7L1 97 aa12.32□□□□□ -0.44
LMO2-204ENST00000464025 OCIAD2Q56VL3 154 aa12.32□□□□□ -0.44
LMO2-204ENST00000464025 SPANXDQ9BXN6 97 aa12.32□□□□□ -0.44
LMO2-204ENST00000464025 SPANXCQ9NY87 97 aa12.32□□□□□ -0.44
LMO2-204ENST00000464025 APOC4P55056 127 aa12.31□□□□□ -0.44
LMO2-204ENST00000464025 COX6A2Q02221 97 aa12.31□□□□□ -0.44
LMO2-204ENST00000464025 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
LMO2-204ENST00000464025 A0A0B4J2C4 111 aa12.3□□□□□ -0.44
LMO2-204ENST00000464025 LYRM9A8MSI8 78 aa12.3□□□□□ -0.44
LMO2-204ENST00000464025 NDUFA1O15239 70 aa12.3□□□□□ -0.44
LMO2-204ENST00000464025 TSPAN13O95857 204 aa12.3□□□□□ -0.44
LMO2-204ENST00000464025 RNF183Q96D59 192 aa12.3□□□□□ -0.44
LMO2-204ENST00000464025 PRO1854Q9UHT4 67 aa12.3□□□□□ -0.44
LMO2-204ENST00000464025 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.3□□□□□ -0.44
LMO2-204ENST00000464025 A4D1N5 150 aa12.3□□□□□ -0.44
LMO2-204ENST00000464025 F8W1H4 67 aa12.3□□□□□ -0.44
LMO2-204ENST00000464025 APOMO95445 188 aa12.3□□□□□ -0.44
LMO2-204ENST00000464025 MUSTN1Q8IVN3 82 aa12.3□□□□□ -0.44
LMO2-204ENST00000464025 LYRM7Q5U5X0 104 aa12.29□□□□□ -0.44
LMO2-204ENST00000464025 K7ERU9 68 aa12.27□□□□□ -0.44
LMO2-204ENST00000464025 DEFB130BP0DP73 79 aa12.27□□□□□ -0.44
LMO2-204ENST00000464025 DEFB130AP0DP74 79 aa12.27□□□□□ -0.44
LMO2-204ENST00000464025 RBX1P62877 108 aa12.27□□□□□ -0.44
LMO2-204ENST00000464025 HIVEP1P15822 2718 aa12.26□□□□□ -0.45
LMO2-204ENST00000464025 SMIM1B2RUZ4 78 aa12.26□□□□□ -0.45
LMO2-204ENST00000464025 F5H768 121 aa12.26□□□□□ -0.45
LMO2-204ENST00000464025 MIAQ16674 131 aa12.26□□□□□ -0.45
LMO2-204ENST00000464025 PRO0255Q9UI72 69 aa12.26□□□□□ -0.45
LMO2-204ENST00000464025 NIPBLQ6KC79 2804 aaeCLIP12.26□□□□□ -0.45
LMO2-204ENST00000464025 TRAV13-1A0A0B4J241 112 aa12.26□□□□□ -0.45
LMO2-204ENST00000464025 A8MZ25 164 aa12.26□□□□□ -0.45
LMO2-204ENST00000464025 IFITM1P13164 125 aa12.26□□□□□ -0.45
LMO2-204ENST00000464025 H3BMG7 143 aa12.24□□□□□ -0.45
LMO2-204ENST00000464025 EIF4EBP3O60516 100 aaPredicted RBP12.24□□□□□ -0.45
LMO2-204ENST00000464025 IGHV3-33P01772 117 aa12.24□□□□□ -0.45
LMO2-204ENST00000464025 ADAMTSL4-AS1Q5T5F5 129 aa12.24□□□□□ -0.45
LMO2-204ENST00000464025 ATP6V0E2Q8NHE4 81 aa12.24□□□□□ -0.45
LMO2-204ENST00000464025 TRBV20-1A0A075B6N2 111 aa12.23□□□□□ -0.45
LMO2-204ENST00000464025 FAM222AQ5U5X8 452 aa12.23□□□□□ -0.45
LMO2-204ENST00000464025 PRO0461Q9UI25 63 aa12.23□□□□□ -0.45
LMO2-204ENST00000464025 CBY1Q9Y3M2 126 aa12.23□□□□□ -0.45
LMO2-204ENST00000464025 MIFP14174 115 aa12.22□□□□□ -0.45
LMO2-204ENST00000464025 GYPEP15421 78 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 212.4 ms