RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CAMK2N2Q96S95 79 aa8.77□□□□□ -1.01
SMC1A-204ENST00000463684 BIN3Q9NQY0 253 aa8.77□□□□□ -1.01
SMC1A-204ENST00000463684 H0Y9J4 135 aa8.76□□□□□ -1.01
SMC1A-204ENST00000463684 I3L3M4 83 aa8.76□□□□□ -1.01
SMC1A-204ENST00000463684 RPL18AQ02543 176 aaKnown RBP8.76□□□□□ -1.01
SMC1A-204ENST00000463684 C11orf52Q96A22 123 aa8.76□□□□□ -1.01
SMC1A-204ENST00000463684 A0A087WZ39 114 aa8.75□□□□□ -1.01
SMC1A-204ENST00000463684 RAB19A4D1S5 217 aa8.75□□□□□ -1.01
SMC1A-204ENST00000463684 CTRLP40313 264 aa8.75□□□□□ -1.01
SMC1A-204ENST00000463684 CCL20P78556 96 aa8.75□□□□□ -1.01
SMC1A-204ENST00000463684 TSKUQ8WUA8 353 aa8.75□□□□□ -1.01
SMC1A-204ENST00000463684 MANBALQ9NQG1 85 aa8.75□□□□□ -1.01
SMC1A-204ENST00000463684 TRAV1-1A0A0B4J248 108 aa8.74□□□□□ -1.01
SMC1A-204ENST00000463684 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.74□□□□□ -1.01
SMC1A-204ENST00000463684 COX7A2LO14548 114 aa8.74□□□□□ -1.01
SMC1A-204ENST00000463684 UBE2D1P51668 147 aa8.74□□□□□ -1.01
SMC1A-204ENST00000463684 MEF2BQ02080 365 aaPredicted RBP8.74□□□□□ -1.01
SMC1A-204ENST00000463684 MRAP2Q96G30 205 aa8.74□□□□□ -1.01
SMC1A-204ENST00000463684 CDC42SE2Q9NRR3 84 aa8.74□□□□□ -1.01
SMC1A-204ENST00000463684 GNG13Q9P2W3 67 aa8.74□□□□□ -1.01
SMC1A-204ENST00000463684 C1orf196B1AJZ1 125 aa8.73□□□□□ -1.01
SMC1A-204ENST00000463684 NUDT10Q8NFP7 164 aa8.73□□□□□ -1.01
SMC1A-204ENST00000463684 NUDT11Q96G61 164 aa8.73□□□□□ -1.01
SMC1A-204ENST00000463684 C2orf48Q96LS8 159 aa8.73□□□□□ -1.01
SMC1A-204ENST00000463684 CNFNQ9BYD5 112 aa8.73□□□□□ -1.01
SMC1A-204ENST00000463684 BCL2L11O43521 198 aa8.72□□□□□ -1.01
SMC1A-204ENST00000463684 ESDP10768 282 aa8.72□□□□□ -1.01
SMC1A-204ENST00000463684 MRPL52Q86TS9 123 aaKnown RBP8.72□□□□□ -1.01
SMC1A-204ENST00000463684 FAM210AQ96ND0 272 aa8.72□□□□□ -1.01
SMC1A-204ENST00000463684 OPRPNQ99935 248 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-204ENST00000463684 G3V3Q6 166 aa8.71□□□□□ -1.02
SMC1A-204ENST00000463684 RPL13AP40429 203 aaKnown RBP8.71□□□□□ -1.02
SMC1A-204ENST00000463684 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
SMC1A-204ENST00000463684 TSHBP01222 138 aa8.7□□□□□ -1.02
SMC1A-204ENST00000463684 FOXA3P55318 350 aaPredicted RBP8.7□□□□□ -1.02
SMC1A-204ENST00000463684 RNF151Q2KHN1 245 aa8.7□□□□□ -1.02
SMC1A-204ENST00000463684 LCE2AQ5TA79 106 aaPredicted RBP8.7□□□□□ -1.02
SMC1A-204ENST00000463684 ST20Q9HBF5 79 aa8.7□□□□□ -1.02
SMC1A-204ENST00000463684 MED9Q9NWA0 146 aa8.7□□□□□ -1.02
SMC1A-204ENST00000463684 TMEM242Q9NWH2 141 aa8.7□□□□□ -1.02
SMC1A-204ENST00000463684 PDE6DO43924 150 aa8.69□□□□□ -1.02
SMC1A-204ENST00000463684 RPP21Q9H633 154 aaKnown RBP8.69□□□□□ -1.02
SMC1A-204ENST00000463684 FAT4Q6V0I7 4981 aa8.69□□□□□ -1.02
SMC1A-204ENST00000463684 TRBV20OR9-2A0A075B6H5 130 aa8.68□□□□□ -1.02
SMC1A-204ENST00000463684 C7orf77A4D0Y5 90 aa8.68□□□□□ -1.02
SMC1A-204ENST00000463684 TEX46H3BTG2 121 aa8.68□□□□□ -1.02
SMC1A-204ENST00000463684 KRTAP1-4P0C5Y4 121 aa8.68□□□□□ -1.02
SMC1A-204ENST00000463684 SPAG11BQ08648 103 aa8.67□□□□□ -1.02
SMC1A-204ENST00000463684 SMAGPQ0VAQ4 97 aa8.67□□□□□ -1.02
SMC1A-204ENST00000463684 ZNF345Q14585 488 aa8.67□□□□□ -1.02
SMC1A-204ENST00000463684 C5orf38Q86SI9 138 aa8.67□□□□□ -1.02
SMC1A-204ENST00000463684 IMMP2LQ96T52 175 aa8.67□□□□□ -1.02
SMC1A-204ENST00000463684 TRAV13-1A0A0B4J241 112 aa8.66□□□□□ -1.02
SMC1A-204ENST00000463684 KANTRA0A1W2PQU2 76 aa8.66□□□□□ -1.02
SMC1A-204ENST00000463684 KRTAP11-1Q8IUC1 163 aa8.66□□□□□ -1.02
SMC1A-204ENST00000463684 RNASE7Q9H1E1 156 aaKnown RBP8.66□□□□□ -1.02
SMC1A-204ENST00000463684 CARHSP1Q9Y2V2 147 aaKnown RBP8.66□□□□□ -1.02
SMC1A-204ENST00000463684 FAM168BA1KXE4 195 aa8.65□□□□□ -1.02
SMC1A-204ENST00000463684 SMLR1H3BR10 107 aa8.65□□□□□ -1.02
SMC1A-204ENST00000463684 FAM19A5Q7Z5A7 132 aaPredicted RBP8.65□□□□□ -1.02
SMC1A-204ENST00000463684 OR10D4PQ8NGN7 298 aa8.65□□□□□ -1.02
SMC1A-204ENST00000463684 MRPL35Q9NZE8 188 aaKnown RBP8.65□□□□□ -1.02
SMC1A-204ENST00000463684 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
SMC1A-204ENST00000463684 F8WDY8 70 aa8.64□□□□□ -1.03
SMC1A-204ENST00000463684 TSPAN13O95857 204 aa8.64□□□□□ -1.03
SMC1A-204ENST00000463684 FCER1GP30273 86 aa8.64□□□□□ -1.03
SMC1A-204ENST00000463684 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
SMC1A-204ENST00000463684 UBE2BP63146 152 aa8.64□□□□□ -1.03
SMC1A-204ENST00000463684 RNASE13Q5GAN3 156 aaKnown RBP8.64□□□□□ -1.03
SMC1A-204ENST00000463684 CSDC2Q9Y534 153 aaKnown RBP8.64□□□□□ -1.03
SMC1A-204ENST00000463684 VCYO14598 125 aa8.62□□□□□ -1.03
SMC1A-204ENST00000463684 NDUFA1O15239 70 aa8.62□□□□□ -1.03
SMC1A-204ENST00000463684 TMEM241Q24JQ0 296 aa8.62□□□□□ -1.03
SMC1A-204ENST00000463684 OCC1Q8TAD7 63 aa8.62□□□□□ -1.03
SMC1A-204ENST00000463684 BORCS7Q96B45 105 aa8.62□□□□□ -1.03
SMC1A-204ENST00000463684 UBE2D4Q9Y2X8 147 aa8.62□□□□□ -1.03
SMC1A-204ENST00000463684 HMSDA8MTL9 139 aa8.61□□□□□ -1.03
SMC1A-204ENST00000463684 A8MWL6 223 aa8.61□□□□□ -1.03
SMC1A-204ENST00000463684 K7EN84 100 aa8.61□□□□□ -1.03
SMC1A-204ENST00000463684 M0QXV9 152 aa8.61□□□□□ -1.03
SMC1A-204ENST00000463684 GATCO43716 136 aaKnown RBP8.61□□□□□ -1.03
SMC1A-204ENST00000463684 TLX1NBP0CAT3 122 aa8.61□□□□□ -1.03
SMC1A-204ENST00000463684 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
SMC1A-204ENST00000463684 ORAOV1Q8WV07 137 aa8.61□□□□□ -1.03
SMC1A-204ENST00000463684 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
SMC1A-204ENST00000463684 C10orf25Q5T742 122 aa8.59□□□□□ -1.03
SMC1A-204ENST00000463684 TMEM18Q96B42 140 aa8.59□□□□□ -1.03
SMC1A-204ENST00000463684 KIR2DL4Q99706 377 aa8.59□□□□□ -1.03
SMC1A-204ENST00000463684 RAB4AP20338 218 aa8.58□□□□□ -1.04
SMC1A-204ENST00000463684 UNQ6190/PRO20217Q6UXQ8 127 aa8.58□□□□□ -1.04
SMC1A-204ENST00000463684 Q6ZUT4 128 aa8.58□□□□□ -1.04
SMC1A-204ENST00000463684 TMEM191AQ9H0A3 160 aa8.58□□□□□ -1.04
SMC1A-204ENST00000463684 SMDT1Q9H4I9 107 aa8.58□□□□□ -1.04
SMC1A-204ENST00000463684 ZNF861PO60384 105 aa8.57□□□□□ -1.04
SMC1A-204ENST00000463684 TAGLN2P37802 199 aaKnown RBP8.57□□□□□ -1.04
SMC1A-204ENST00000463684 TIMM21Q9BVV7 248 aa8.57□□□□□ -1.04
SMC1A-204ENST00000463684 C6orf48Q9UBA6 75 aa8.57□□□□□ -1.04
SMC1A-204ENST00000463684 A0A1B0GUT8 65 aa8.56□□□□□ -1.04
SMC1A-204ENST00000463684 PPP1R17O96001 155 aa8.56□□□□□ -1.04
SMC1A-204ENST00000463684 KRTAP7-1Q8IUC3 87 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms