RNA–Protein interactions for RNA: ENST00000463634.6

PRPF4B-203, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 2,590 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-203ENST00000463634 PLEKHB2Q96CS7 222 aa5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 HIST1H4GQ99525 98 aa5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 A0A1B0GWB2 263 aa5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 IGKV2-29A2NJV5 120 aaPredicted RBP5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 IGLL5B9A064 214 aa5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 PF4P02776 101 aa5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 TSPEAR-AS2P59090 65 aa5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 NDUFA11Q86Y39 141 aa5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 CHCHD7Q9BUK0 85 aa5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 NOP10Q9NPE3 64 aaKnown RBP5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 NHP2Q9NX24 153 aaKnown RBP5.81□□□□□ -1.48
PRPF4B-203ENST00000463634 A0A0J9YXV3 536 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 GAGE12JA6NER3 117 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 GAGE7O76087 117 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 GAGE12FP0CL80 117 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 GAGE12GP0CL81 117 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 GAGE12IP0CL82 117 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 CMC4P56277 68 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 GAGE4Q13068 117 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 SPATA3Q8NHX4 192 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 NBEAL2Q6ZNJ1 2754 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 HERVK_113P61574 105 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 NFE4Q86UQ8 179 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 LINC00482Q8N8I6 264 aa5.8□□□□□ -1.48
PRPF4B-203ENST00000463634 TRBV7-3A0A075B6L6 115 aa5.79□□□□□ -1.48
PRPF4B-203ENST00000463634 IGHV3-64A0A075B6Q5 118 aa5.79□□□□□ -1.48
PRPF4B-203ENST00000463634 PLAC8L1A1L4L8 177 aa5.79□□□□□ -1.48
PRPF4B-203ENST00000463634 SCGB1D4Q6XE38 83 aa5.79□□□□□ -1.48
PRPF4B-203ENST00000463634 CSNK1G2-AS1Q8NCQ2 148 aa5.79□□□□□ -1.48
PRPF4B-203ENST00000463634 PYGO1Q9Y3Y4 419 aa5.79□□□□□ -1.48
PRPF4B-203ENST00000463634 ATRQ13535 2644 aa5.79□□□□□ -1.48
PRPF4B-203ENST00000463634 DNAJC30Q96LL9 226 aa5.79□□□□□ -1.48
PRPF4B-203ENST00000463634 UBE2D4Q9Y2X8 147 aa5.79□□□□□ -1.48
PRPF4B-203ENST00000463634 NHLRC4P0CG21 123 aaPredicted RBP5.78□□□□□ -1.48
PRPF4B-203ENST00000463634 ZNF22P17026 224 aaPredicted RBP5.78□□□□□ -1.48
PRPF4B-203ENST00000463634 TAL2Q16559 108 aa5.78□□□□□ -1.48
PRPF4B-203ENST00000463634 TRRAPQ9Y4A5 3859 aa5.78□□□□□ -1.48
PRPF4B-203ENST00000463634 TMEM223A0PJW6 202 aa5.78□□□□□ -1.48
PRPF4B-203ENST00000463634 SLC25A29Q8N8R3 303 aa5.78□□□□□ -1.48
PRPF4B-203ENST00000463634 AMELXQ99217 191 aa5.78□□□□□ -1.48
PRPF4B-203ENST00000463634 TRAV4A0A0B4J268 109 aa5.77□□□□□ -1.49
PRPF4B-203ENST00000463634 TMEM262E9PQX1 116 aa5.77□□□□□ -1.49
PRPF4B-203ENST00000463634 J3QQQ9 107 aa5.77□□□□□ -1.49
PRPF4B-203ENST00000463634 K7EQD1 137 aa5.77□□□□□ -1.49
PRPF4B-203ENST00000463634 DAZ2Q13117 558 aaKnown RBP5.77□□□□□ -1.49
PRPF4B-203ENST00000463634 C16orf74Q96GX8 76 aa5.77□□□□□ -1.49
PRPF4B-203ENST00000463634 TEP1Q99973 2627 aaKnown RBP5.77□□□□□ -1.49
PRPF4B-203ENST00000463634 TRGV2A0A075B6R0 118 aa5.77□□□□□ -1.49
PRPF4B-203ENST00000463634 A0A0J9YY99 117 aa5.77□□□□□ -1.49
PRPF4B-203ENST00000463634 RRN3P1Q2M238 152 aa5.77□□□□□ -1.49
PRPF4B-203ENST00000463634 MRPS36P82909 103 aaKnown RBP5.76□□□□□ -1.49
PRPF4B-203ENST00000463634 C12orf74Q32Q52 190 aa5.76□□□□□ -1.49
PRPF4B-203ENST00000463634 PPDPFLQ8WWR9 84 aa5.76□□□□□ -1.49
PRPF4B-203ENST00000463634 CITED1Q99966 193 aa5.76□□□□□ -1.49
PRPF4B-203ENST00000463634 LGALS3P17931 250 aaKnown RBP5.76□□□□□ -1.49
PRPF4B-203ENST00000463634 NDUFV3P56181 108 aaKnown RBP5.76□□□□□ -1.49
PRPF4B-203ENST00000463634 RPL36AP83881 106 aaKnown RBP5.76□□□□□ -1.49
PRPF4B-203ENST00000463634 SRSF9Q13242 221 aaKnown RBP eCLIP5.76□□□□□ -1.49
PRPF4B-203ENST00000463634 RPL36ALQ969Q0 106 aaKnown RBP5.76□□□□□ -1.49
PRPF4B-203ENST00000463634 LOC100131303A0A0U1RQF7 123 aa5.75□□□□□ -1.49
PRPF4B-203ENST00000463634 LEPROTO15243 131 aa5.75□□□□□ -1.49
PRPF4B-203ENST00000463634 LINC00694P0DN24 101 aa5.75□□□□□ -1.49
PRPF4B-203ENST00000463634 NTM-AS1Q6ZSK4 140 aa5.75□□□□□ -1.49
PRPF4B-203ENST00000463634 TRAV8-3A0A0A6YYJ7 113 aa5.75□□□□□ -1.49
PRPF4B-203ENST00000463634 TRBV10-1A0A0K0K1A3 114 aa5.75□□□□□ -1.49
PRPF4B-203ENST00000463634 UBE2D3P61077 147 aa5.75□□□□□ -1.49
PRPF4B-203ENST00000463634 UBE2D2P62837 147 aa5.75□□□□□ -1.49
PRPF4B-203ENST00000463634 FLNBO75369 2602 aaKnown RBP5.75□□□□□ -1.49
PRPF4B-203ENST00000463634 CRLF1O75462 422 aa5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 GAGE2BQ13066 116 aa5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 GAGE2EQ4V326 116 aa5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 C5orf47Q569G3 176 aa5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 OVOL2Q9BRP0 275 aa5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 GAGE2DQ9UEU5 116 aa5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 CCDC179H3BU77 68 aa5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 IGHV3-30-3P0DP02 117 aa5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 DGAT2L7PQ6IED9 249 aa5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 TEN1Q86WV5 123 aa5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 TIMM21Q9BVV7 248 aa5.74□□□□□ -1.49
PRPF4B-203ENST00000463634 TINCRA0A1B0GVN0 87 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 A8MZ25 164 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 IFITM1P13164 125 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 SMCPP49901 116 aaPredicted RBP5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 UBE2D1P51668 147 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 TTC32Q5I0X7 151 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 Q6Q795 121 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 DAZ4Q86SG3 579 aaKnown RBP5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 TMEM126AQ9H061 195 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 DAZ3Q9NR90 486 aaKnown RBP5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 TRGV4A0A0C4DH28 118 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 IGHV3-30P01768 117 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 IGHV3-30-5P0DP03 117 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 DEFB130BP0DP73 79 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 DEFB130AP0DP74 79 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 C10orf126Q8N4M7 172 aa5.73□□□□□ -1.49
PRPF4B-203ENST00000463634 M0QXV9 152 aa5.72□□□□□ -1.49
PRPF4B-203ENST00000463634 C9orf66Q5T8R8 295 aa5.72□□□□□ -1.49
PRPF4B-203ENST00000463634 TRBV6-4A0A1B0GX49 114 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms