RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 PAX4O43316 350 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 TRIAP1O43715 76 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 ATP5G1P05496 136 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
MSH2-204ENST00000461394 EGFEM1PQ0D2K5 195 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 LBHQ53QV2 105 aaPredicted RBP4.81□□□□□ -1.64
MSH2-204ENST00000461394 Q6ZUT4 128 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 OR5A1Q8NGJ0 315 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 CHCHD5Q9BSY4 110 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 GEMIN7Q9H840 131 aaKnown RBP4.81□□□□□ -1.64
MSH2-204ENST00000461394 PRO0255Q9UI72 69 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 UBE2D4Q9Y2X8 147 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
MSH2-204ENST00000461394 SETD2Q9BYW2 2564 aaPredicted RBP4.8□□□□□ -1.64
MSH2-204ENST00000461394 IGLV4-69A0A075B6H9 119 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 IGHV3-64A0A075B6Q5 118 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 A0A096LPF7 62 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 IGKV2D-26A0A0A0MRZ7 120 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 TEX48A0A1B0GUV7 120 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 A8MZ25 164 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 DLEU1O43261 78 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 FGF6P10767 208 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 LGALS3P17931 250 aaKnown RBP4.8□□□□□ -1.64
MSH2-204ENST00000461394 CRYBA4P53673 196 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 GAGE6Q13070 117 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 DEFB121Q5J5C9 76 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 COL5A1-AS1Q5SY13 56 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 BOD1L2Q8IYS8 172 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 LINC00612Q8N6U2 182 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 Q8NAQ8 132 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 ATP6V0E2Q8NHE4 81 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 TTTY13Q9BZ97 58 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 GTSF1LQ9H1H1 148 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 CELA1Q9UNI1 258 aa4.8□□□□□ -1.64
MSH2-204ENST00000461394 C9orf118A6NHY6 69 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 ZNF815PA8K554 130 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 E9PLD3 99 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 SIVA1O15304 175 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 NPSP0C0P6 89 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 ZNF25P17030 456 aaPredicted RBP4.79□□□□□ -1.64
MSH2-204ENST00000461394 HSD52Q0P140 79 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 RNF151Q2KHN1 245 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 MPV17L2Q567V2 206 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 SCGB1D4Q6XE38 83 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 C2orf91Q6ZV80 131 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 LINC00469Q8N7U9 141 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 AMELXQ99217 191 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 SPATA25Q9BR10 227 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 TIMM21Q9BVV7 248 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 BAHCC1Q9P281 2608 aa4.79□□□□□ -1.64
MSH2-204ENST00000461394 TRAV13-1A0A0B4J241 112 aa4.78□□□□□ -1.64
MSH2-204ENST00000461394 IGKV3OR2-268A0A0C4DH90 116 aa4.78□□□□□ -1.64
MSH2-204ENST00000461394 MYMXA0A1B0GTQ4 84 aa4.78□□□□□ -1.64
MSH2-204ENST00000461394 A0A1B0GV90 55 aa4.78□□□□□ -1.64
MSH2-204ENST00000461394 TMEM262E9PQX1 116 aa4.78□□□□□ -1.64
MSH2-204ENST00000461394 H3BRM9 83 aa4.78□□□□□ -1.64
MSH2-204ENST00000461394 PRB2P02812 416 aaPredicted RBP4.78□□□□□ -1.64
MSH2-204ENST00000461394 LINC00694P0DN24 101 aa4.78□□□□□ -1.64
MSH2-204ENST00000461394 ZNF22P17026 224 aaPredicted RBP4.78□□□□□ -1.64
MSH2-204ENST00000461394 MRPS36P82909 103 aaKnown RBP4.78□□□□□ -1.64
MSH2-204ENST00000461394 NTM-AS1Q6ZSK4 140 aa4.78□□□□□ -1.64
MSH2-204ENST00000461394 NFE4Q86UQ8 179 aa4.78□□□□□ -1.64
MSH2-204ENST00000461394 MAPKAPK5-AS1Q8N8E1 139 aa4.78□□□□□ -1.64
MSH2-204ENST00000461394 PLEKHB2Q96CS7 222 aa4.78□□□□□ -1.64
MSH2-204ENST00000461394 TEP1Q99973 2627 aaKnown RBP4.77□□□□□ -1.65
MSH2-204ENST00000461394 TRAV26-1A0A087WT03 109 aa4.77□□□□□ -1.65
MSH2-204ENST00000461394 TRBV6-8A0A0A6YYG3 113 aa4.77□□□□□ -1.65
MSH2-204ENST00000461394 TINCRA0A1B0GVN0 87 aa4.77□□□□□ -1.65
MSH2-204ENST00000461394 TMEM223A0PJW6 202 aa4.77□□□□□ -1.65
MSH2-204ENST00000461394 H7C423 109 aa4.77□□□□□ -1.65
MSH2-204ENST00000461394 LEPROTO15243 131 aa4.77□□□□□ -1.65
MSH2-204ENST00000461394 SEC11AP67812 179 aa4.77□□□□□ -1.65
MSH2-204ENST00000461394 BVES-AS1Q5T3Y7 98 aa4.77□□□□□ -1.65
MSH2-204ENST00000461394 MRAPQ8TCY5 172 aa4.77□□□□□ -1.65
MSH2-204ENST00000461394 HIST1H4GQ99525 98 aa4.77□□□□□ -1.65
MSH2-204ENST00000461394 ICOSQ9Y6W8 199 aa4.77□□□□□ -1.65
MSH2-204ENST00000461394 A6NDN8 102 aa4.76□□□□□ -1.65
MSH2-204ENST00000461394 J3QQQ9 107 aa4.76□□□□□ -1.65
MSH2-204ENST00000461394 PLA2G1BP04054 148 aaKnown RBP4.76□□□□□ -1.65
MSH2-204ENST00000461394 SPINK8P0C7L1 97 aa4.76□□□□□ -1.65
MSH2-204ENST00000461394 UBE2D1P51668 147 aa4.76□□□□□ -1.65
MSH2-204ENST00000461394 SRSF9Q13242 221 aaKnown RBP eCLIP4.76□□□□□ -1.65
MSH2-204ENST00000461394 MRPL23Q16540 153 aaKnown RBP4.76□□□□□ -1.65
MSH2-204ENST00000461394 SBSPONQ8IVN8 264 aa4.76□□□□□ -1.65
MSH2-204ENST00000461394 ORAOV1Q8WV07 137 aa4.76□□□□□ -1.65
MSH2-204ENST00000461394 HIGD1BQ9P298 99 aa4.76□□□□□ -1.65
MSH2-204ENST00000461394 A0A0J9YWU9 116 aa4.75□□□□□ -1.65
MSH2-204ENST00000461394 HERVK_113P63121 156 aa4.75□□□□□ -1.65
MSH2-204ENST00000461394 C12orf74Q32Q52 190 aa4.75□□□□□ -1.65
MSH2-204ENST00000461394 SH2D6Q7Z4S9 175 aa4.75□□□□□ -1.65
MSH2-204ENST00000461394 VSIG2Q96IQ7 327 aa4.75□□□□□ -1.65
MSH2-204ENST00000461394 CDC42SE2Q9NRR3 84 aa4.75□□□□□ -1.65
MSH2-204ENST00000461394 CSDC2Q9Y534 153 aaKnown RBP4.75□□□□□ -1.65
MSH2-204ENST00000461394 TRAV8-3A0A0A6YYJ7 113 aa4.74□□□□□ -1.65
MSH2-204ENST00000461394 TSPEAR-AS2P59090 65 aa4.74□□□□□ -1.65
MSH2-204ENST00000461394 C11orf45Q8TAV5 145 aa4.74□□□□□ -1.65
MSH2-204ENST00000461394 FAM104AQ969W3 186 aa4.74□□□□□ -1.65
MSH2-204ENST00000461394 C11orf68Q9H3H3 251 aaKnown RBP4.74□□□□□ -1.65
MSH2-204ENST00000461394 ATRQ13535 2644 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 IGLV4-60A0A075B6I1 120 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms