RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 A0A1B0GUV1 79 aa8.42□□□□□ -1.06
HDAC4-207ENST00000461113 TSHBP01222 138 aa8.42□□□□□ -1.06
HDAC4-207ENST00000461113 DGAT2L7PQ6IED9 249 aa8.42□□□□□ -1.06
HDAC4-207ENST00000461113 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.41□□□□□ -1.06
HDAC4-207ENST00000461113 TGIF2-C20orf24A0A0A6YYL0 155 aa8.41□□□□□ -1.06
HDAC4-207ENST00000461113 LOC389332A0A1B0GUA5 103 aa8.41□□□□□ -1.06
HDAC4-207ENST00000461113 IGKV2-29A2NJV5 120 aaPredicted RBP8.41□□□□□ -1.06
HDAC4-207ENST00000461113 ZNF25P17030 456 aaPredicted RBP8.41□□□□□ -1.06
HDAC4-207ENST00000461113 XGP55808 180 aa8.41□□□□□ -1.06
HDAC4-207ENST00000461113 Q8N3U1 123 aa8.41□□□□□ -1.06
HDAC4-207ENST00000461113 Q8N976 141 aa8.41□□□□□ -1.06
HDAC4-207ENST00000461113 MRPL18Q9H0U6 180 aaKnown RBP8.41□□□□□ -1.06
HDAC4-207ENST00000461113 TRAPPC1Q9Y5R8 145 aa8.41□□□□□ -1.06
HDAC4-207ENST00000461113 IGKV2D-24A0A075B6R9 120 aa8.4□□□□□ -1.06
HDAC4-207ENST00000461113 FGF6P10767 208 aa8.4□□□□□ -1.06
HDAC4-207ENST00000461113 G0S2P27469 103 aa8.4□□□□□ -1.06
HDAC4-207ENST00000461113 MIAQ16674 131 aa8.4□□□□□ -1.06
HDAC4-207ENST00000461113 KIAA1644Q3SXP7 199 aa8.4□□□□□ -1.06
HDAC4-207ENST00000461113 OR5A1Q8NGJ0 315 aa8.4□□□□□ -1.06
HDAC4-207ENST00000461113 C1orf43Q9BWL3 253 aa8.4□□□□□ -1.06
HDAC4-207ENST00000461113 NXT2Q9NPJ8 142 aaKnown RBP8.4□□□□□ -1.06
HDAC4-207ENST00000461113 ESDP10768 282 aa8.39□□□□□ -1.07
HDAC4-207ENST00000461113 LINC00269Q8N2A0 174 aa8.39□□□□□ -1.07
HDAC4-207ENST00000461113 PRSS47A8MTI9 375 aa8.38□□□□□ -1.07
HDAC4-207ENST00000461113 K7EMI3 77 aa8.38□□□□□ -1.07
HDAC4-207ENST00000461113 SMR3BP02814 79 aaPredicted RBP8.38□□□□□ -1.07
HDAC4-207ENST00000461113 REG3AQ06141 175 aa8.38□□□□□ -1.07
HDAC4-207ENST00000461113 Q8N8P6 123 aa8.38□□□□□ -1.07
HDAC4-207ENST00000461113 PRSS3P2Q8NHM4 247 aa8.38□□□□□ -1.07
HDAC4-207ENST00000461113 TRAV8-4A0A0B4J246 113 aa8.37□□□□□ -1.07
HDAC4-207ENST00000461113 ORMDL2Q53FV1 153 aa8.37□□□□□ -1.07
HDAC4-207ENST00000461113 CLPSL2Q6UWE3 100 aa8.37□□□□□ -1.07
HDAC4-207ENST00000461113 C20orf203Q8NBC4 194 aa8.37□□□□□ -1.07
HDAC4-207ENST00000461113 IGLV4-60A0A075B6I1 120 aa8.36□□□□□ -1.07
HDAC4-207ENST00000461113 SERTAD4-AS1Q5TG53 156 aa8.36□□□□□ -1.07
HDAC4-207ENST00000461113 ENHOQ6UWT2 76 aa8.36□□□□□ -1.07
HDAC4-207ENST00000461113 Q6ZRN7 208 aaPredicted RBP8.36□□□□□ -1.07
HDAC4-207ENST00000461113 MRPL52Q86TS9 123 aaKnown RBP8.36□□□□□ -1.07
HDAC4-207ENST00000461113 CBLN2Q8IUK8 224 aa8.36□□□□□ -1.07
HDAC4-207ENST00000461113 PRR34Q9NV39 138 aa8.36□□□□□ -1.07
HDAC4-207ENST00000461113 IGKV3OR2-268A0A0C4DH90 116 aa8.35□□□□□ -1.07
HDAC4-207ENST00000461113 FUSP35637 526 aaKnown RBP eCLIP8.35□□□□□ -1.07
HDAC4-207ENST00000461113 FA2HQ7L5A8 372 aa8.35□□□□□ -1.07
HDAC4-207ENST00000461113 ALKBH7Q9BT30 221 aaPredicted RBP8.35□□□□□ -1.07
HDAC4-207ENST00000461113 TIMM21Q9BVV7 248 aa8.35□□□□□ -1.07
HDAC4-207ENST00000461113 SPANXA1Q9NS26 97 aa8.35□□□□□ -1.07
HDAC4-207ENST00000461113 CSDC2Q9Y534 153 aaKnown RBP8.35□□□□□ -1.07
HDAC4-207ENST00000461113 IFI27P40305 119 aaPredicted RBP8.34□□□□□ -1.07
HDAC4-207ENST00000461113 ZNF664Q8N3J9 261 aa8.34□□□□□ -1.07
HDAC4-207ENST00000461113 CYSLTR1Q9Y271 337 aa8.34□□□□□ -1.07
HDAC4-207ENST00000461113 A0A087WTM6 91 aa8.33□□□□□ -1.08
HDAC4-207ENST00000461113 LINC01549A6NIU2 74 aa8.33□□□□□ -1.08
HDAC4-207ENST00000461113 FAM229AH3BQW9 127 aa8.33□□□□□ -1.08
HDAC4-207ENST00000461113 RAB5BP61020 215 aa8.33□□□□□ -1.08
HDAC4-207ENST00000461113 SS18Q15532 418 aa8.33□□□□□ -1.08
HDAC4-207ENST00000461113 C14orf177Q52M58 125 aa8.33□□□□□ -1.08
HDAC4-207ENST00000461113 UBE2D4Q9Y2X8 147 aa8.33□□□□□ -1.08
HDAC4-207ENST00000461113 IGLV10-54A0A075B6I4 117 aa8.32□□□□□ -1.08
HDAC4-207ENST00000461113 CCL25O15444 150 aa8.32□□□□□ -1.08
HDAC4-207ENST00000461113 Q6ZN92 141 aa8.32□□□□□ -1.08
HDAC4-207ENST00000461113 CDC42SE2Q9NRR3 84 aa8.32□□□□□ -1.08
HDAC4-207ENST00000461113 PGPEP1Q9NXJ5 209 aa8.32□□□□□ -1.08
HDAC4-207ENST00000461113 S100A1P23297 94 aa8.31□□□□□ -1.08
HDAC4-207ENST00000461113 RPL39P62891 51 aaKnown RBP8.31□□□□□ -1.08
HDAC4-207ENST00000461113 PAPPA-AS1Q5QFB9 102 aa8.31□□□□□ -1.08
HDAC4-207ENST00000461113 CFAP161Q6P656 301 aa8.31□□□□□ -1.08
HDAC4-207ENST00000461113 BAALCQ8WXS3 180 aa8.31□□□□□ -1.08
HDAC4-207ENST00000461113 YPEL4Q96NS1 127 aa8.31□□□□□ -1.08
HDAC4-207ENST00000461113 KRTAP29-1A8MX34 341 aaPredicted RBP8.3□□□□□ -1.08
HDAC4-207ENST00000461113 MRPS36P82909 103 aaKnown RBP8.3□□□□□ -1.08
HDAC4-207ENST00000461113 C2orf66Q6UXQ4 117 aa8.3□□□□□ -1.08
HDAC4-207ENST00000461113 PLA2G2DQ9UNK4 145 aa8.3□□□□□ -1.08
HDAC4-207ENST00000461113 PYGO1Q9Y3Y4 419 aa8.3□□□□□ -1.08
HDAC4-207ENST00000461113 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
HDAC4-207ENST00000461113 C1orf196B1AJZ1 125 aa8.29□□□□□ -1.08
HDAC4-207ENST00000461113 KRTAP10-1P60331 282 aa8.29□□□□□ -1.08
HDAC4-207ENST00000461113 CDPF1Q6NVV7 123 aa8.29□□□□□ -1.08
HDAC4-207ENST00000461113 CHCHD10Q8WYQ3 142 aaPredicted RBP8.29□□□□□ -1.08
HDAC4-207ENST00000461113 C2orf88Q9BSF0 95 aa8.29□□□□□ -1.08
HDAC4-207ENST00000461113 AP5S1Q9NUS5 200 aa8.29□□□□□ -1.08
HDAC4-207ENST00000461113 TRAV13-1A0A0B4J241 112 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 LRCOL1A6NCL2 159 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 GAGE12HA6NDE8 117 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 LECT2O14960 151 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 NPSP0C0P6 89 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 LINC00614P0C842 121 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 HAMPP81172 84 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 TEX43Q6ZNM6 134 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 Q6ZUT4 128 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 C18orf32Q8TCD1 76 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 NTN5Q8WTR8 489 aaPredicted RBP8.28□□□□□ -1.08
HDAC4-207ENST00000461113 TMEM141Q96I45 108 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 VCX2Q9H322 139 aa8.28□□□□□ -1.08
HDAC4-207ENST00000461113 IFITM10A6NMD0 228 aa8.27□□□□□ -1.09
HDAC4-207ENST00000461113 TRGC2P03986 189 aa8.27□□□□□ -1.09
HDAC4-207ENST00000461113 XCL1P47992 114 aa8.27□□□□□ -1.09
HDAC4-207ENST00000461113 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.09
HDAC4-207ENST00000461113 BAGE3Q86Y29 109 aa8.27□□□□□ -1.09
HDAC4-207ENST00000461113 Q8N814 137 aa8.27□□□□□ -1.09
HDAC4-207ENST00000461113 SCGB3A1Q96QR1 104 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms