RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 TRAV8-4A0A0B4J246 113 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 IGHV3-66A0A0C4DH42 116 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 A0A1B0GXF2 115 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 SYNGR2O43760 224 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 IL4P05112 153 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 PRB4P10163 310 aaPredicted RBP3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 SYNJ2BPP57105 145 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 CD164Q04900 197 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 C4orf26Q17RF5 130 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 SPANXN5Q5MJ07 72 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 TMEM170BQ5T4T1 132 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 UNQ9165/PRO28630Q6UXU0 137 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 AMN1Q8IY45 258 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 C4orf3Q8WVX3 66 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 UBE2E2Q96LR5 201 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 MGST2Q99735 147 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 SLC25A22Q9H936 323 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 NHP2Q9NX24 153 aaKnown RBP3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 RYR2Q92736 4967 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 A0A087X002 238 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 TRAV2A0A0B4J234 112 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 TRAV8-2A0A0B4J237 113 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 IGHV3-38A0A0C4DH36 116 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 MYMXA0A1B0GTQ4 84 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 EPM2AB3EWF7 344 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 J3QQQ9 107 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 NPYP01303 97 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 CTSGP08311 255 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 GCHFRP30047 84 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 HBBP68871 147 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 ERHP84090 104 aaKnown RBP3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 DEFB121Q5J5C9 76 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 HRCT1Q6UXD1 115 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 NOTCH2NLQ7Z3S9 236 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 C11orf45Q8TAV5 145 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 EEF1AKMT3Q96AZ1 226 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 LINC00477Q96M19 166 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 GFRA4Q9GZZ7 299 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 TMEM167BQ9NRX6 74 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 PSENENQ9NZ42 101 aa3.5□□□□□ -1.85
ATPAF1-203ENST00000460928 TENM2Q9NT68 2774 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 IGKV1D-37A0A075B6S9 117 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 IGKV1OR2-108A0A075B7D4 117 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 FAM223BA6NKX1 122 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 H3BUA1 57 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 IGKV1-17P01599 117 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 IGKCP01834 107 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 MGST1P10620 155 aaKnown RBP3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 PFN2P35080 140 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 MYCNOSP40205 109 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 FOXA3P55318 350 aaPredicted RBP3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 MRPS36P82909 103 aaKnown RBP3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 KLK9Q2XQG4 91 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 LINC01620Q4KN68 170 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 C2orf83Q53S99 150 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 PVRIGQ6DKI7 326 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 FAM223AQ8IWN6 122 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 POM121L12Q8N7R1 296 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 WFDC9Q8NEX5 89 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 IFI27L1Q96BM0 104 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 USMG5Q96IX5 58 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 C18orf15Q96N68 181 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 ODF3Q96PU9 254 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 NPCDR1Q9BY65 106 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 AGPAT4-IT1Q9H0P7 198 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 TP73-AS1Q9UF72 201 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 KLK9Q9UKQ9 250 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 STAB2Q8WWQ8 2551 aa3.49□□□□□ -1.85
ATPAF1-203ENST00000460928 DNAH9Q9NYC9 4486 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 IGKV3-7A0A075B6H7 116 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 TRBV7-3A0A075B6L6 115 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 TRBV25-1A0A075B6N4 114 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 TRAV12-2A0A075B6T6 113 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 TRAV13-1A0A0B4J241 112 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 FAM236AA0A1B0GUQ0 79 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 UBE2L5PA0A1B0GUS4 154 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 FAM236BA0A1B0GV22 79 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 WI2-2373I1.2A0A1W2PRP0 233 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 RBAKDNA6NC62 111 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 INS-IGF2F8WCM5 200 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 CD7P09564 240 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 PYYP10082 97 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 CENPWQ5EE01 88 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 FAM19A1Q7Z5A9 133 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 LITAFQ99732 161 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 SHANK2-AS3Q9BTD1 123 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 WFDC10AQ9H1F0 79 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 EPDR1Q9UM22 224 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 ZNF256Q9Y2P7 627 aaPredicted RBP3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 HERC2O95714 4834 aa3.48□□□□□ -1.85
ATPAF1-203ENST00000460928 TRBV7-1A0A0A6YYK4 115 aa3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 H3BT86 120 aa3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 LGALS9O00182 355 aa3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 SLC25A20O43772 301 aa3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 UBE2D1P51668 147 aa3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 SUB1P53999 127 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms