RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 GAGE12IP0CL82 117 aa12□□□□□ -0.49
YIPF3-205ENST00000460547 ZNF22P17026 224 aaPredicted RBP12□□□□□ -0.49
YIPF3-205ENST00000460547 GCSHP23434 173 aa12□□□□□ -0.49
YIPF3-205ENST00000460547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12□□□□□ -0.49
YIPF3-205ENST00000460547 IGKV2-29A2NJV5 120 aaPredicted RBP12□□□□□ -0.49
YIPF3-205ENST00000460547 SMIM9A6NGZ8 99 aa12□□□□□ -0.49
YIPF3-205ENST00000460547 FXYD2P54710 66 aa12□□□□□ -0.49
YIPF3-205ENST00000460547 LINC00612Q8N6U2 182 aa12□□□□□ -0.49
YIPF3-205ENST00000460547 KIR2DL5BQ8NHK3 375 aa12□□□□□ -0.49
YIPF3-205ENST00000460547 A0A0J9YXV3 536 aa11.99□□□□□ -0.49
YIPF3-205ENST00000460547 UBE2V1Q13404 147 aa11.98□□□□□ -0.49
YIPF3-205ENST00000460547 CEMP1Q6PRD7 247 aaPredicted RBP11.98□□□□□ -0.49
YIPF3-205ENST00000460547 C9orf118A6NHY6 69 aa11.97□□□□□ -0.49
YIPF3-205ENST00000460547 LEPROTO15243 131 aa11.97□□□□□ -0.49
YIPF3-205ENST00000460547 TSPEAR-AS2P59090 65 aa11.97□□□□□ -0.49
YIPF3-205ENST00000460547 Q6ZUT4 128 aa11.97□□□□□ -0.49
YIPF3-205ENST00000460547 GTSF1LQ9H1H1 148 aa11.97□□□□□ -0.49
YIPF3-205ENST00000460547 CSDC2Q9Y534 153 aaKnown RBP11.97□□□□□ -0.49
YIPF3-205ENST00000460547 TINCRA0A1B0GVN0 87 aa11.97□□□□□ -0.49
YIPF3-205ENST00000460547 J3QQQ9 107 aa11.97□□□□□ -0.49
YIPF3-205ENST00000460547 SBSPONQ8IVN8 264 aa11.97□□□□□ -0.49
YIPF3-205ENST00000460547 HIST1H4GQ99525 98 aa11.97□□□□□ -0.49
YIPF3-205ENST00000460547 X6R8D5 127 aa11.97□□□□□ -0.49
YIPF3-205ENST00000460547 SMAGPQ0VAQ4 97 aa11.96□□□□□ -0.5
YIPF3-205ENST00000460547 VAMP3Q15836 100 aa11.96□□□□□ -0.5
YIPF3-205ENST00000460547 PLEKHB2Q96CS7 222 aa11.96□□□□□ -0.5
YIPF3-205ENST00000460547 GAGE12JA6NER3 117 aa11.95□□□□□ -0.5
YIPF3-205ENST00000460547 GAGE4Q13068 117 aa11.95□□□□□ -0.5
YIPF3-205ENST00000460547 GAGE5Q13069 117 aa11.95□□□□□ -0.5
YIPF3-205ENST00000460547 GAGE13Q4V321 117 aa11.95□□□□□ -0.5
YIPF3-205ENST00000460547 NTM-AS1Q6ZSK4 140 aa11.95□□□□□ -0.5
YIPF3-205ENST00000460547 DNAH3Q8TD57 4116 aa11.95□□□□□ -0.5
YIPF3-205ENST00000460547 PRKDCP78527 4128 aaKnown RBP11.95□□□□□ -0.5
YIPF3-205ENST00000460547 TRGV4A0A0C4DH28 118 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 K7EP13 123 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 SMIM13P0DJ93 91 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 LINC00694P0DN24 101 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 LGALS3P17931 250 aaKnown RBP11.94□□□□□ -0.5
YIPF3-205ENST00000460547 PTTG1IPP53801 180 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 FHL2Q14192 279 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 SCGB1D4Q6XE38 83 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 OR5A1Q8NGJ0 315 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 A0A0J9YY99 117 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 CCL25O15444 150 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 UBE2D1P51668 147 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 APOC4P55056 127 aa11.94□□□□□ -0.5
YIPF3-205ENST00000460547 SPANXB1Q9NS25 103 aaPredicted RBP11.94□□□□□ -0.5
YIPF3-205ENST00000460547 A0A1B0GWB2 263 aa11.93□□□□□ -0.5
YIPF3-205ENST00000460547 RNASE13Q5GAN3 156 aaKnown RBP11.92□□□□□ -0.5
YIPF3-205ENST00000460547 DGAT2L7PQ6IED9 249 aa11.92□□□□□ -0.5
YIPF3-205ENST00000460547 FAM19A3Q7Z5A8 133 aa11.92□□□□□ -0.5
YIPF3-205ENST00000460547 IGLV5-45A0A087WSX0 123 aa11.91□□□□□ -0.5
YIPF3-205ENST00000460547 H7C423 109 aa11.91□□□□□ -0.5
YIPF3-205ENST00000460547 TIRAPP58753 221 aa11.91□□□□□ -0.5
YIPF3-205ENST00000460547 NHP2Q9NX24 153 aaKnown RBP11.91□□□□□ -0.5
YIPF3-205ENST00000460547 AMMECR1LQ6DCA0 310 aa11.91□□□□□ -0.5
YIPF3-205ENST00000460547 B9D2Q9BPU9 175 aa11.91□□□□□ -0.5
YIPF3-205ENST00000460547 TMEM243Q9BU79 118 aa11.91□□□□□ -0.5
YIPF3-205ENST00000460547 TGP01266 2768 aa11.9□□□□□ -0.5
YIPF3-205ENST00000460547 LYRM9A8MSI8 78 aa11.9□□□□□ -0.5
YIPF3-205ENST00000460547 IGHV1-58A0A0C4DH39 117 aa11.89□□□□□ -0.51
YIPF3-205ENST00000460547 LOC100131303A0A0U1RQF7 123 aa11.89□□□□□ -0.51
YIPF3-205ENST00000460547 TMEM238LA0A1B0GVL6 79 aa11.89□□□□□ -0.51
YIPF3-205ENST00000460547 A6NJY4 79 aa11.89□□□□□ -0.51
YIPF3-205ENST00000460547 H3BUT2 72 aa11.89□□□□□ -0.51
YIPF3-205ENST00000460547 IGHV3-30-3P0DP02 117 aa11.89□□□□□ -0.51
YIPF3-205ENST00000460547 C12orf74Q32Q52 190 aa11.88□□□□□ -0.51
YIPF3-205ENST00000460547 RAB37Q96AX2 223 aa11.88□□□□□ -0.51
YIPF3-205ENST00000460547 GEMIN7Q9H840 131 aaKnown RBP11.88□□□□□ -0.51
YIPF3-205ENST00000460547 A0A1W2PPM0 123 aa11.87□□□□□ -0.51
YIPF3-205ENST00000460547 K7ERJ3 54 aa11.87□□□□□ -0.51
YIPF3-205ENST00000460547 SRSF9Q13242 221 aaKnown RBP eCLIP11.87□□□□□ -0.51
YIPF3-205ENST00000460547 VSIG2Q96IQ7 327 aa11.87□□□□□ -0.51
YIPF3-205ENST00000460547 DEFB130BP0DP73 79 aa11.87□□□□□ -0.51
YIPF3-205ENST00000460547 DEFB130AP0DP74 79 aa11.87□□□□□ -0.51
YIPF3-205ENST00000460547 CDC42SE2Q9NRR3 84 aa11.87□□□□□ -0.51
YIPF3-205ENST00000460547 UBE2L6O14933 153 aa11.86□□□□□ -0.51
YIPF3-205ENST00000460547 HERVK_113P63121 156 aa11.86□□□□□ -0.51
YIPF3-205ENST00000460547 DEFB135Q30KP9 77 aa11.86□□□□□ -0.51
YIPF3-205ENST00000460547 IGHV3-64A0A075B6Q5 118 aa11.85□□□□□ -0.51
YIPF3-205ENST00000460547 GTF2H5Q6ZYL4 71 aa11.85□□□□□ -0.51
YIPF3-205ENST00000460547 TRBV6-8A0A0A6YYG3 113 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 K7EP34 96 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 IGHV3-30P01768 117 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
YIPF3-205ENST00000460547 IGHV3-30-5P0DP03 117 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 LINC00242Q5T6M2 205 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 FAM222AQ5U5X8 452 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 C10orf126Q8N4M7 172 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 TMEM101Q96IK0 257 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 TRAV8-3A0A0A6YYJ7 113 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 GAGE10A6NGK3 116 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 FABP2P12104 132 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 MIFP14174 115 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 CDKN2A-AS1Q9UH64 79 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 PRO0255Q9UI72 69 aa11.84□□□□□ -0.51
YIPF3-205ENST00000460547 IGHV4-28A0A0C4DH34 117 aa11.83□□□□□ -0.52
YIPF3-205ENST00000460547 IGLL5B9A064 214 aa11.83□□□□□ -0.52
YIPF3-205ENST00000460547 TMEM238C9JI98 176 aa11.83□□□□□ -0.52
YIPF3-205ENST00000460547 ZFAND6Q6FIF0 208 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms