RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.51□□□□□ -0.73
SDF4-204ENST00000459994 IGKV2-29A2NJV5 120 aaPredicted RBP10.51□□□□□ -0.73
SDF4-204ENST00000459994 LINC01549A6NIU2 74 aa10.51□□□□□ -0.73
SDF4-204ENST00000459994 UBE2L6O14933 153 aa10.51□□□□□ -0.73
SDF4-204ENST00000459994 DNAH10OSP0CZ25 163 aa10.51□□□□□ -0.73
SDF4-204ENST00000459994 GAGE6Q13070 117 aa10.51□□□□□ -0.73
SDF4-204ENST00000459994 MRPL52Q86TS9 123 aaKnown RBP10.51□□□□□ -0.73
SDF4-204ENST00000459994 TIMM21Q9BVV7 248 aa10.51□□□□□ -0.73
SDF4-204ENST00000459994 CYSLTR1Q9Y271 337 aa10.51□□□□□ -0.73
SDF4-204ENST00000459994 A0A1B0GUV1 79 aa10.5□□□□□ -0.73
SDF4-204ENST00000459994 TMEM262E9PQX1 116 aa10.5□□□□□ -0.73
SDF4-204ENST00000459994 HSBP1O75506 76 aa10.5□□□□□ -0.73
SDF4-204ENST00000459994 LINC01556Q5JQF7 62 aa10.5□□□□□ -0.73
SDF4-204ENST00000459994 C2orf66Q6UXQ4 117 aa10.5□□□□□ -0.73
SDF4-204ENST00000459994 A0A087WX48 190 aa10.49□□□□□ -0.73
SDF4-204ENST00000459994 FGF6P10767 208 aa10.49□□□□□ -0.73
SDF4-204ENST00000459994 ZNF25P17030 456 aaPredicted RBP10.49□□□□□ -0.73
SDF4-204ENST00000459994 NDUFA6P56556 154 aa10.49□□□□□ -0.73
SDF4-204ENST00000459994 RPL39P62891 51 aaKnown RBP10.49□□□□□ -0.73
SDF4-204ENST00000459994 TOMM6Q96B49 74 aa10.49□□□□□ -0.73
SDF4-204ENST00000459994 PYGO1Q9Y3Y4 419 aa10.49□□□□□ -0.73
SDF4-204ENST00000459994 CSDC2Q9Y534 153 aaKnown RBP10.49□□□□□ -0.73
SDF4-204ENST00000459994 A0A096LNJ9 63 aa10.48□□□□□ -0.73
SDF4-204ENST00000459994 K7EP13 123 aa10.48□□□□□ -0.73
SDF4-204ENST00000459994 NUPR1O60356 82 aa10.48□□□□□ -0.73
SDF4-204ENST00000459994 HBDP02042 147 aa10.48□□□□□ -0.73
SDF4-204ENST00000459994 BTF3P20290 206 aaKnown RBP10.48□□□□□ -0.73
SDF4-204ENST00000459994 RBX1P62877 108 aa10.48□□□□□ -0.73
SDF4-204ENST00000459994 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
SDF4-204ENST00000459994 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
SDF4-204ENST00000459994 SPANXA1Q9NS26 97 aa10.48□□□□□ -0.73
SDF4-204ENST00000459994 UBE2D4Q9Y2X8 147 aa10.48□□□□□ -0.73
SDF4-204ENST00000459994 CDK2AP2O75956 126 aa10.46□□□□□ -0.73
SDF4-204ENST00000459994 NPSP0C0P6 89 aa10.46□□□□□ -0.73
SDF4-204ENST00000459994 PDZD11Q5EBL8 140 aa10.46□□□□□ -0.73
SDF4-204ENST00000459994 DGAT2L7PQ6IED9 249 aa10.46□□□□□ -0.73
SDF4-204ENST00000459994 OR5A1Q8NGJ0 315 aa10.46□□□□□ -0.73
SDF4-204ENST00000459994 TMEM101Q96IK0 257 aa10.46□□□□□ -0.73
SDF4-204ENST00000459994 TRAV9-2A0A087WT02 112 aa10.45□□□□□ -0.74
SDF4-204ENST00000459994 IGIPA6NJ69 53 aa10.45□□□□□ -0.74
SDF4-204ENST00000459994 IGHV3-30P01768 117 aa10.45□□□□□ -0.74
SDF4-204ENST00000459994 IGHV3-33P01772 117 aa10.45□□□□□ -0.74
SDF4-204ENST00000459994 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
SDF4-204ENST00000459994 IGHV3-30-5P0DP03 117 aa10.45□□□□□ -0.74
SDF4-204ENST00000459994 MRPS36P82909 103 aaKnown RBP10.45□□□□□ -0.74
SDF4-204ENST00000459994 PMCHL1Q16048 86 aa10.45□□□□□ -0.74
SDF4-204ENST00000459994 ERASQ7Z444 233 aa10.45□□□□□ -0.74
SDF4-204ENST00000459994 Q8N3U1 123 aa10.45□□□□□ -0.74
SDF4-204ENST00000459994 Q8N976 141 aa10.45□□□□□ -0.74
SDF4-204ENST00000459994 TIMM17AQ99595 171 aa10.45□□□□□ -0.74
SDF4-204ENST00000459994 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
SDF4-204ENST00000459994 S100A6P06703 90 aa10.44□□□□□ -0.74
SDF4-204ENST00000459994 FAM19A2Q8N3H0 131 aa10.44□□□□□ -0.74
SDF4-204ENST00000459994 C10orf126Q8N4M7 172 aa10.44□□□□□ -0.74
SDF4-204ENST00000459994 MAPKAPK5-AS1Q8N8E1 139 aa10.44□□□□□ -0.74
SDF4-204ENST00000459994 TMEM141Q96I45 108 aa10.44□□□□□ -0.74
SDF4-204ENST00000459994 SCGB3A1Q96QR1 104 aa10.44□□□□□ -0.74
SDF4-204ENST00000459994 CDC42SE2Q9NRR3 84 aa10.44□□□□□ -0.74
SDF4-204ENST00000459994 ZNF664Q8N3J9 261 aa10.43□□□□□ -0.74
SDF4-204ENST00000459994 FAM104AQ969W3 186 aa10.43□□□□□ -0.74
SDF4-204ENST00000459994 IGLV4-3A0A075B6K6 122 aa10.42□□□□□ -0.74
SDF4-204ENST00000459994 ATP5LO75964 103 aa10.42□□□□□ -0.74
SDF4-204ENST00000459994 ANGP03950 147 aaKnown RBP10.42□□□□□ -0.74
SDF4-204ENST00000459994 PAPPA-AS1Q5QFB9 102 aa10.42□□□□□ -0.74
SDF4-204ENST00000459994 KLK12Q9UKR0 248 aa10.42□□□□□ -0.74
SDF4-204ENST00000459994 IBA57-AS1B1ANH7 110 aa10.41□□□□□ -0.74
SDF4-204ENST00000459994 Q6ZUT4 128 aa10.41□□□□□ -0.74
SDF4-204ENST00000459994 PACRGQ96M98 296 aaPredicted RBP10.41□□□□□ -0.74
SDF4-204ENST00000459994 PRR34Q9NV39 138 aa10.41□□□□□ -0.74
SDF4-204ENST00000459994 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.4□□□□□ -0.74
SDF4-204ENST00000459994 LEPROTL1O95214 131 aa10.4□□□□□ -0.74
SDF4-204ENST00000459994 LINC00269Q8N2A0 174 aa10.4□□□□□ -0.74
SDF4-204ENST00000459994 OPRPNQ99935 248 aaPredicted RBP10.4□□□□□ -0.74
SDF4-204ENST00000459994 A0A087WTM6 91 aa10.39□□□□□ -0.75
SDF4-204ENST00000459994 C5orf52A6NGY3 159 aa10.39□□□□□ -0.75
SDF4-204ENST00000459994 Q6ZN92 141 aa10.39□□□□□ -0.75
SDF4-204ENST00000459994 HIST3H2BBQ8N257 126 aa10.39□□□□□ -0.75
SDF4-204ENST00000459994 AMELXQ99217 191 aa10.39□□□□□ -0.75
SDF4-204ENST00000459994 HSPB8Q9UJY1 196 aa10.39□□□□□ -0.75
SDF4-204ENST00000459994 SNRPEP62304 92 aaKnown RBP10.38□□□□□ -0.75
SDF4-204ENST00000459994 REG3AQ06141 175 aa10.38□□□□□ -0.75
SDF4-204ENST00000459994 ENHOQ6UWT2 76 aa10.38□□□□□ -0.75
SDF4-204ENST00000459994 IFI27L1Q96BM0 104 aa10.38□□□□□ -0.75
SDF4-204ENST00000459994 VCX2Q9H322 139 aa10.38□□□□□ -0.75
SDF4-204ENST00000459994 TRAV8-3A0A0A6YYJ7 113 aa10.37□□□□□ -0.75
SDF4-204ENST00000459994 CRPP02741 224 aa10.37□□□□□ -0.75
SDF4-204ENST00000459994 FABP4P15090 132 aa10.37□□□□□ -0.75
SDF4-204ENST00000459994 MIAQ16674 131 aa10.37□□□□□ -0.75
SDF4-204ENST00000459994 TEX43Q6ZNM6 134 aa10.37□□□□□ -0.75
SDF4-204ENST00000459994 Q8N1X5 172 aa10.37□□□□□ -0.75
SDF4-204ENST00000459994 UBE2WQ96B02 151 aa10.37□□□□□ -0.75
SDF4-204ENST00000459994 CCL25O15444 150 aa10.36□□□□□ -0.75
SDF4-204ENST00000459994 KRTAP10-1P60331 282 aa10.36□□□□□ -0.75
SDF4-204ENST00000459994 RNASE13Q5GAN3 156 aaKnown RBP10.36□□□□□ -0.75
SDF4-204ENST00000459994 LINC00173Q6ZV60 143 aa10.36□□□□□ -0.75
SDF4-204ENST00000459994 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
SDF4-204ENST00000459994 BAALCQ8WXS3 180 aa10.36□□□□□ -0.75
SDF4-204ENST00000459994 TMA7Q9Y2S6 64 aaKnown RBP10.36□□□□□ -0.75
SDF4-204ENST00000459994 TRAV8-4A0A0B4J246 113 aa10.35□□□□□ -0.75
SDF4-204ENST00000459994 S100A2P29034 98 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms