RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 SUMO2P61956 95 aaKnown RBP11.48□□□□□ -0.57
MSH6-207ENST00000456246 C15orf56Q8N910 161 aa11.48□□□□□ -0.57
MSH6-207ENST00000456246 KIR2DL4Q99706 377 aa11.48□□□□□ -0.57
MSH6-207ENST00000456246 SRSF3P84103 164 aaKnown RBP11.47□□□□□ -0.57
MSH6-207ENST00000456246 CIRBPQ14011 172 aaKnown RBP11.47□□□□□ -0.57
MSH6-207ENST00000456246 FAM104BQ5XKR9 115 aa11.47□□□□□ -0.57
MSH6-207ENST00000456246 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
MSH6-207ENST00000456246 NRACQ8N912 160 aa11.46□□□□□ -0.57
MSH6-207ENST00000456246 GVQW2A0A096LPI5 108 aaPredicted RBP11.45□□□□□ -0.58
MSH6-207ENST00000456246 LINC00959A0A1B0GUT2 108 aa11.45□□□□□ -0.58
MSH6-207ENST00000456246 SMKR1H3BMG3 65 aa11.45□□□□□ -0.58
MSH6-207ENST00000456246 J3QL48 77 aa11.45□□□□□ -0.58
MSH6-207ENST00000456246 TCAPO15273 167 aa11.45□□□□□ -0.58
MSH6-207ENST00000456246 SLPIP03973 132 aa11.45□□□□□ -0.58
MSH6-207ENST00000456246 CAMPP49913 170 aa11.45□□□□□ -0.58
MSH6-207ENST00000456246 FOXI1Q12951 378 aa11.45□□□□□ -0.58
MSH6-207ENST00000456246 SS18Q15532 418 aa11.45□□□□□ -0.58
MSH6-207ENST00000456246 C20orf78Q9BR46 151 aa11.45□□□□□ -0.58
MSH6-207ENST00000456246 CDC42SE2Q9NRR3 84 aa11.45□□□□□ -0.58
MSH6-207ENST00000456246 CSDC2Q9Y534 153 aaKnown RBP11.45□□□□□ -0.58
MSH6-207ENST00000456246 F8W036 122 aa11.44□□□□□ -0.58
MSH6-207ENST00000456246 KRTAP10-4P60372 401 aaPredicted RBP11.44□□□□□ -0.58
MSH6-207ENST00000456246 RPL37AP61513 92 aaKnown RBP11.44□□□□□ -0.58
MSH6-207ENST00000456246 MRPL51Q4U2R6 128 aaKnown RBP11.44□□□□□ -0.58
MSH6-207ENST00000456246 TMEM18Q96B42 140 aa11.44□□□□□ -0.58
MSH6-207ENST00000456246 HERC1Q15751 4861 aa11.44□□□□□ -0.58
MSH6-207ENST00000456246 TRBV24-1A0A075B6N3 115 aa11.43□□□□□ -0.58
MSH6-207ENST00000456246 KRTAP29-1A8MX34 341 aaPredicted RBP11.43□□□□□ -0.58
MSH6-207ENST00000456246 CCL25O15444 150 aa11.43□□□□□ -0.58
MSH6-207ENST00000456246 XCL1P47992 114 aa11.43□□□□□ -0.58
MSH6-207ENST00000456246 RPL32P62910 135 aaKnown RBP11.43□□□□□ -0.58
MSH6-207ENST00000456246 HBBP68871 147 aa11.43□□□□□ -0.58
MSH6-207ENST00000456246 HIGD2BQ4VC39 106 aa11.43□□□□□ -0.58
MSH6-207ENST00000456246 ZNF664Q8N3J9 261 aa11.43□□□□□ -0.58
MSH6-207ENST00000456246 PKIGQ9Y2B9 76 aa11.43□□□□□ -0.58
MSH6-207ENST00000456246 IGHV1-58A0A0C4DH39 117 aa11.42□□□□□ -0.58
MSH6-207ENST00000456246 CKS2P33552 79 aa11.42□□□□□ -0.58
MSH6-207ENST00000456246 PANO1I0J062 215 aa11.41□□□□□ -0.58
MSH6-207ENST00000456246 RAB14P61106 215 aa11.41□□□□□ -0.58
MSH6-207ENST00000456246 CD164L2Q6UWJ8 174 aa11.41□□□□□ -0.58
MSH6-207ENST00000456246 ATP5L2Q7Z4Y8 100 aa11.41□□□□□ -0.58
MSH6-207ENST00000456246 SPACA4Q8TDM5 124 aa11.41□□□□□ -0.58
MSH6-207ENST00000456246 A0A1B0GXF2 115 aa11.4□□□□□ -0.58
MSH6-207ENST00000456246 PHOX2AO14813 284 aa11.4□□□□□ -0.58
MSH6-207ENST00000456246 PPBPP02775 128 aa11.4□□□□□ -0.58
MSH6-207ENST00000456246 PNRC1Q12796 327 aaPredicted RBP11.4□□□□□ -0.58
MSH6-207ENST00000456246 MRPL54Q6P161 138 aaKnown RBP11.4□□□□□ -0.58
MSH6-207ENST00000456246 DPH3Q96FX2 82 aa11.4□□□□□ -0.58
MSH6-207ENST00000456246 TIMM21Q9BVV7 248 aa11.4□□□□□ -0.58
MSH6-207ENST00000456246 UBE2D4Q9Y2X8 147 aa11.4□□□□□ -0.58
MSH6-207ENST00000456246 C1orf196B1AJZ1 125 aa11.39□□□□□ -0.59
MSH6-207ENST00000456246 TNFRSF6BO95407 300 aa11.38□□□□□ -0.59
MSH6-207ENST00000456246 A0A087WYN8 130 aa11.37□□□□□ -0.59
MSH6-207ENST00000456246 D6R8Y8 96 aa11.37□□□□□ -0.59
MSH6-207ENST00000456246 OXTP01178 125 aa11.37□□□□□ -0.59
MSH6-207ENST00000456246 COX6A2Q02221 97 aa11.37□□□□□ -0.59
MSH6-207ENST00000456246 SMIM2Q9BVW6 85 aa11.37□□□□□ -0.59
MSH6-207ENST00000456246 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
MSH6-207ENST00000456246 CHTF8P0CG12 524 aa11.36□□□□□ -0.59
MSH6-207ENST00000456246 LINC00474Q9P2X8 69 aa11.36□□□□□ -0.59
MSH6-207ENST00000456246 ZNF561-AS1K7EIQ3 104 aa11.35□□□□□ -0.59
MSH6-207ENST00000456246 COX7A2LO14548 114 aa11.35□□□□□ -0.59
MSH6-207ENST00000456246 MALP21145 153 aa11.35□□□□□ -0.59
MSH6-207ENST00000456246 ORMDL3Q8N138 153 aa11.35□□□□□ -0.59
MSH6-207ENST00000456246 MT-ND4LP03901 98 aa11.34□□□□□ -0.59
MSH6-207ENST00000456246 PRSS3P2Q8NHM4 247 aa11.34□□□□□ -0.59
MSH6-207ENST00000456246 ANAPC16Q96DE5 110 aa11.34□□□□□ -0.59
MSH6-207ENST00000456246 CARD19Q96LW7 228 aa11.34□□□□□ -0.59
MSH6-207ENST00000456246 SPANXA1Q9NS26 97 aa11.34□□□□□ -0.59
MSH6-207ENST00000456246 NPYP01303 97 aa11.33□□□□□ -0.6
MSH6-207ENST00000456246 Q6ZUT4 128 aa11.33□□□□□ -0.6
MSH6-207ENST00000456246 C7orf33Q8WU49 177 aa11.33□□□□□ -0.6
MSH6-207ENST00000456246 TRAV13-1A0A0B4J241 112 aa11.32□□□□□ -0.6
MSH6-207ENST00000456246 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
MSH6-207ENST00000456246 MAJINQ3KP22 176 aa11.32□□□□□ -0.6
MSH6-207ENST00000456246 LAMTOR2Q9Y2Q5 125 aa11.32□□□□□ -0.6
MSH6-207ENST00000456246 IGKV2-24A0A0C4DH68 120 aa11.31□□□□□ -0.6
MSH6-207ENST00000456246 APOMO95445 188 aa11.31□□□□□ -0.6
MSH6-207ENST00000456246 MRPS36P82909 103 aaKnown RBP11.31□□□□□ -0.6
MSH6-207ENST00000456246 RNASE13Q5GAN3 156 aaKnown RBP11.31□□□□□ -0.6
MSH6-207ENST00000456246 TMEM136Q6ZRR5 245 aa11.31□□□□□ -0.6
MSH6-207ENST00000456246 PRELID3AQ96N28 172 aa11.31□□□□□ -0.6
MSH6-207ENST00000456246 RAB5AP20339 215 aa11.3□□□□□ -0.6
MSH6-207ENST00000456246 RPL39P62891 51 aaKnown RBP11.3□□□□□ -0.6
MSH6-207ENST00000456246 A0A096LNI7 61 aa11.29□□□□□ -0.6
MSH6-207ENST00000456246 CLLU1Q5K131 121 aa11.29□□□□□ -0.6
MSH6-207ENST00000456246 STPG4Q8N801 248 aa11.29□□□□□ -0.6
MSH6-207ENST00000456246 LINC00526Q96FQ7 95 aa11.29□□□□□ -0.6
MSH6-207ENST00000456246 C2orf48Q96LS8 159 aa11.28□□□□□ -0.6
MSH6-207ENST00000456246 IGLV4-69A0A075B6H9 119 aa11.27□□□□□ -0.61
MSH6-207ENST00000456246 PRSS47A8MTI9 375 aa11.27□□□□□ -0.61
MSH6-207ENST00000456246 IFI27P40305 119 aaPredicted RBP11.27□□□□□ -0.61
MSH6-207ENST00000456246 Q6ZRU5 148 aa11.27□□□□□ -0.61
MSH6-207ENST00000456246 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
MSH6-207ENST00000456246 C5orf38Q86SI9 138 aa11.26□□□□□ -0.61
MSH6-207ENST00000456246 OR10D4PQ8NGN7 298 aa11.26□□□□□ -0.61
MSH6-207ENST00000456246 CAMK2N2Q96S95 79 aa11.26□□□□□ -0.61
MSH6-207ENST00000456246 MAP1LC3AQ9H492 121 aa11.26□□□□□ -0.61
MSH6-207ENST00000456246 PYGO1Q9Y3Y4 419 aa11.26□□□□□ -0.61
MSH6-207ENST00000456246 LOC107984640A0A0U1RRK4 108 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms