RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 KIR2DL4Q99706 377 aa6.87□□□□□ -1.31
DDX39A-203ENST00000454233 LINC00959A0A1B0GUT2 108 aa6.86□□□□□ -1.31
DDX39A-203ENST00000454233 J3QL48 77 aa6.86□□□□□ -1.31
DDX39A-203ENST00000454233 SS18Q15532 418 aa6.86□□□□□ -1.31
DDX39A-203ENST00000454233 HIGD2BQ4VC39 106 aa6.86□□□□□ -1.31
DDX39A-203ENST00000454233 C15orf56Q8N910 161 aa6.86□□□□□ -1.31
DDX39A-203ENST00000454233 DPH3Q96FX2 82 aa6.86□□□□□ -1.31
DDX39A-203ENST00000454233 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
DDX39A-203ENST00000454233 LINC00862A6NCI5 91 aa6.85□□□□□ -1.31
DDX39A-203ENST00000454233 F8W036 122 aa6.85□□□□□ -1.31
DDX39A-203ENST00000454233 CCL25O15444 150 aa6.85□□□□□ -1.31
DDX39A-203ENST00000454233 SLPIP03973 132 aa6.85□□□□□ -1.31
DDX39A-203ENST00000454233 CKS2P33552 79 aa6.85□□□□□ -1.31
DDX39A-203ENST00000454233 XCL1P47992 114 aa6.85□□□□□ -1.31
DDX39A-203ENST00000454233 RPL37AP61513 92 aaKnown RBP6.85□□□□□ -1.31
DDX39A-203ENST00000454233 FOXI1Q12951 378 aa6.85□□□□□ -1.31
DDX39A-203ENST00000454233 MRPL51Q4U2R6 128 aaKnown RBP6.85□□□□□ -1.31
DDX39A-203ENST00000454233 ZNF664Q8N3J9 261 aa6.85□□□□□ -1.31
DDX39A-203ENST00000454233 NRACQ8N912 160 aa6.85□□□□□ -1.31
DDX39A-203ENST00000454233 TMEM18Q96B42 140 aa6.85□□□□□ -1.31
DDX39A-203ENST00000454233 CDC42SE2Q9NRR3 84 aa6.85□□□□□ -1.31
DDX39A-203ENST00000454233 GVQW2A0A096LPI5 108 aaPredicted RBP6.84□□□□□ -1.31
DDX39A-203ENST00000454233 PANO1I0J062 215 aa6.84□□□□□ -1.31
DDX39A-203ENST00000454233 RAB14P61106 215 aa6.84□□□□□ -1.31
DDX39A-203ENST00000454233 HBBP68871 147 aa6.84□□□□□ -1.31
DDX39A-203ENST00000454233 MRPL54Q6P161 138 aaKnown RBP6.84□□□□□ -1.31
DDX39A-203ENST00000454233 C20orf78Q9BR46 151 aa6.84□□□□□ -1.31
DDX39A-203ENST00000454233 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.31
DDX39A-203ENST00000454233 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
DDX39A-203ENST00000454233 IGHV1-58A0A0C4DH39 117 aa6.83□□□□□ -1.32
DDX39A-203ENST00000454233 TCAPO15273 167 aa6.83□□□□□ -1.32
DDX39A-203ENST00000454233 KRTAP10-4P60372 401 aaPredicted RBP6.83□□□□□ -1.32
DDX39A-203ENST00000454233 CIRBPQ14011 172 aaKnown RBP6.83□□□□□ -1.32
DDX39A-203ENST00000454233 CSDC2Q9Y534 153 aaKnown RBP6.83□□□□□ -1.32
DDX39A-203ENST00000454233 TRBV24-1A0A075B6N3 115 aa6.82□□□□□ -1.32
DDX39A-203ENST00000454233 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
DDX39A-203ENST00000454233 TNFRSF6BO95407 300 aa6.82□□□□□ -1.32
DDX39A-203ENST00000454233 RPL32P62910 135 aaKnown RBP6.82□□□□□ -1.32
DDX39A-203ENST00000454233 CD164L2Q6UWJ8 174 aa6.82□□□□□ -1.32
DDX39A-203ENST00000454233 PKIGQ9Y2B9 76 aa6.82□□□□□ -1.32
DDX39A-203ENST00000454233 UBE2D4Q9Y2X8 147 aa6.82□□□□□ -1.32
DDX39A-203ENST00000454233 A0A087WYN8 130 aa6.81□□□□□ -1.32
DDX39A-203ENST00000454233 A0A1B0GXF2 115 aa6.81□□□□□ -1.32
DDX39A-203ENST00000454233 C1orf196B1AJZ1 125 aa6.81□□□□□ -1.32
DDX39A-203ENST00000454233 D6R8Y8 96 aa6.81□□□□□ -1.32
DDX39A-203ENST00000454233 PPBPP02775 128 aa6.81□□□□□ -1.32
DDX39A-203ENST00000454233 CHTF8P0CG12 524 aa6.81□□□□□ -1.32
DDX39A-203ENST00000454233 COX6A2Q02221 97 aa6.81□□□□□ -1.32
DDX39A-203ENST00000454233 PNRC1Q12796 327 aaPredicted RBP6.81□□□□□ -1.32
DDX39A-203ENST00000454233 ATP5L2Q7Z4Y8 100 aa6.81□□□□□ -1.32
DDX39A-203ENST00000454233 SPACA4Q8TDM5 124 aa6.81□□□□□ -1.32
DDX39A-203ENST00000454233 TIMM21Q9BVV7 248 aa6.81□□□□□ -1.32
DDX39A-203ENST00000454233 SMIM2Q9BVW6 85 aa6.81□□□□□ -1.32
DDX39A-203ENST00000454233 ZNF561-AS1K7EIQ3 104 aa6.8□□□□□ -1.32
DDX39A-203ENST00000454233 PHOX2AO14813 284 aa6.8□□□□□ -1.32
DDX39A-203ENST00000454233 MALP21145 153 aa6.8□□□□□ -1.32
DDX39A-203ENST00000454233 PRSS3P2Q8NHM4 247 aa6.8□□□□□ -1.32
DDX39A-203ENST00000454233 TRAV13-1A0A0B4J241 112 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 IGKV2-24A0A0C4DH68 120 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 COX7A2LO14548 114 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 OXTP01178 125 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 NPYP01303 97 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 MT-ND4LP03901 98 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 MAJINQ3KP22 176 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 RNASE13Q5GAN3 156 aaKnown RBP6.79□□□□□ -1.32
DDX39A-203ENST00000454233 Q6ZUT4 128 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 ORMDL3Q8N138 153 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 ANAPC16Q96DE5 110 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 CARD19Q96LW7 228 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 PLAC8Q9NZF1 115 aa6.79□□□□□ -1.32
DDX39A-203ENST00000454233 RAB5AP20339 215 aa6.78□□□□□ -1.32
DDX39A-203ENST00000454233 RPL39P62891 51 aaKnown RBP6.78□□□□□ -1.32
DDX39A-203ENST00000454233 SYCNQ0VAF6 134 aa6.78□□□□□ -1.32
DDX39A-203ENST00000454233 TMEM136Q6ZRR5 245 aa6.78□□□□□ -1.32
DDX39A-203ENST00000454233 C7orf33Q8WU49 177 aa6.78□□□□□ -1.32
DDX39A-203ENST00000454233 LINC00526Q96FQ7 95 aa6.78□□□□□ -1.32
DDX39A-203ENST00000454233 PRELID3AQ96N28 172 aa6.78□□□□□ -1.32
DDX39A-203ENST00000454233 SPANXA1Q9NS26 97 aa6.78□□□□□ -1.32
DDX39A-203ENST00000454233 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
DDX39A-203ENST00000454233 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
DDX39A-203ENST00000454233 APOMO95445 188 aa6.77□□□□□ -1.33
DDX39A-203ENST00000454233 A0A096LNI7 61 aa6.76□□□□□ -1.33
DDX39A-203ENST00000454233 CLLU1Q5K131 121 aa6.76□□□□□ -1.33
DDX39A-203ENST00000454233 C5orf38Q86SI9 138 aa6.76□□□□□ -1.33
DDX39A-203ENST00000454233 STPG4Q8N801 248 aa6.76□□□□□ -1.33
DDX39A-203ENST00000454233 LAMTOR2Q9Y2Q5 125 aa6.76□□□□□ -1.33
DDX39A-203ENST00000454233 IGLV4-69A0A075B6H9 119 aa6.75□□□□□ -1.33
DDX39A-203ENST00000454233 HNRNPA3P51991 378 aaKnown RBP6.75□□□□□ -1.33
DDX39A-203ENST00000454233 MRPS36P82909 103 aaKnown RBP6.75□□□□□ -1.33
DDX39A-203ENST00000454233 CAMK2N2Q96S95 79 aa6.75□□□□□ -1.33
DDX39A-203ENST00000454233 MAP1LC3AQ9H492 121 aa6.75□□□□□ -1.33
DDX39A-203ENST00000454233 LOC107984640A0A0U1RRK4 108 aa6.74□□□□□ -1.33
DDX39A-203ENST00000454233 IFITM10A6NMD0 228 aa6.74□□□□□ -1.33
DDX39A-203ENST00000454233 IFI27P40305 119 aaPredicted RBP6.74□□□□□ -1.33
DDX39A-203ENST00000454233 C2orf48Q96LS8 159 aa6.74□□□□□ -1.33
DDX39A-203ENST00000454233 OPRPNQ99935 248 aaPredicted RBP6.74□□□□□ -1.33
DDX39A-203ENST00000454233 HERC1Q15751 4861 aa6.73□□□□□ -1.33
DDX39A-203ENST00000454233 LOC389332A0A1B0GUA5 103 aa6.73□□□□□ -1.33
DDX39A-203ENST00000454233 PRSS47A8MTI9 375 aa6.73□□□□□ -1.33
DDX39A-203ENST00000454233 SPAG11BQ08648 103 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms